Wall clock time and date at job start Sun Mar 7 2021 06:34:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 H 1.00901 * 109.47186 * 2 1 4 4 C 1.46901 * 109.46784 * 239.99547 * 2 1 3 5 5 C 1.46896 * 109.46688 * 119.99887 * 2 1 3 6 6 C 1.53000 * 109.47497 * 294.99195 * 5 2 1 7 7 H 1.08995 * 112.84975 * 316.20514 * 6 5 2 8 8 C 1.53784 * 113.61091 * 87.50573 * 6 5 2 9 9 C 1.53779 * 87.08062 * 139.98242 * 8 6 5 10 10 H 1.09004 * 113.61352 * 220.01771 * 9 8 6 11 11 N 1.46497 * 113.61205 * 89.11794 * 9 8 6 12 12 C 1.34781 * 119.99964 * 107.50159 * 11 9 8 13 13 O 1.21278 * 120.00210 * 359.97438 * 12 11 9 14 14 C 1.50699 * 119.99677 * 179.97438 * 12 11 9 15 15 O 1.42909 * 109.46941 * 179.97438 * 14 12 11 16 16 C 1.35917 * 117.00021 * 179.97438 * 15 14 12 17 17 C 1.38791 * 120.05845 * 179.72318 * 16 15 14 18 18 Br 1.89099 * 120.03516 * 0.02602 * 17 16 15 19 19 C 1.38238 * 119.92523 * 179.81161 * 17 16 15 20 20 C 1.38240 * 120.04854 * 0.44499 * 19 17 16 21 21 C 1.50698 * 119.94167 * 179.76607 * 20 19 17 22 22 O 1.42901 * 109.47129 * 245.02041 * 21 20 19 23 23 Si 1.86298 * 109.47150 * 5.01991 * 21 20 19 24 24 C 1.38280 * 120.11489 * 359.78876 * 20 19 17 25 25 C 1.38144 * 120.07659 * 359.97438 * 24 20 19 26 26 C 1.53778 * 87.08243 * 334.56701 * 9 8 6 27 27 H 1.09004 * 109.46739 * 300.00635 * 1 2 3 28 28 H 1.09001 * 109.47165 * 59.99969 * 1 2 3 29 29 H 1.08992 * 109.47412 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.47401 * 300.00318 * 4 2 1 31 31 H 1.09001 * 109.46874 * 60.00306 * 4 2 1 32 32 H 1.08996 * 109.46661 * 180.02562 * 4 2 1 33 33 H 1.09000 * 109.47775 * 54.99807 * 5 2 1 34 34 H 1.09009 * 109.46823 * 174.99638 * 5 2 1 35 35 H 1.09004 * 113.61846 * 254.53538 * 8 6 5 36 36 H 1.09010 * 113.61333 * 25.43235 * 8 6 5 37 37 H 0.97001 * 120.00251 * 287.50162 * 11 9 8 38 38 H 1.08997 * 109.47395 * 299.99741 * 14 12 11 39 39 H 1.09003 * 109.47711 * 60.00425 * 14 12 11 40 40 H 1.08004 * 119.97560 * 180.23289 * 19 17 16 41 41 H 1.08999 * 109.47522 * 125.02354 * 21 20 19 42 42 H 0.96700 * 114.00408 * 179.97438 * 22 21 20 43 43 H 1.48498 * 110.00072 * 300.00255 * 23 21 20 44 44 H 1.48499 * 109.99868 * 61.32125 * 23 21 20 45 45 H 1.08008 * 119.96250 * 179.97438 * 24 20 19 46 46 H 1.07994 * 120.02683 * 179.97438 * 25 24 20 47 47 H 1.08996 * 113.61559 * 270.88201 * 26 9 8 48 48 H 1.09000 * 113.68674 * 139.99056 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9586 -0.6926 -1.1994 5 6 1.9586 -0.6925 1.1994 6 6 1.5540 0.0978 2.4455 7 1 1.7120 1.1707 2.3361 8 6 0.1607 -0.2699 2.9826 9 6 0.7623 -0.1610 4.3936 10 1 0.4114 -0.9329 5.0787 11 7 0.6821 1.1863 4.9633 12 6 -0.1883 1.4462 5.9590 13 8 -0.9054 0.5649 6.3831 14 6 -0.2703 2.8320 6.5454 15 8 -1.2590 2.8549 7.5771 16 6 -1.4592 4.0390 8.2136 17 6 -2.4082 4.1345 9.2219 18 35 -3.4240 2.6168 9.7124 19 6 -2.6069 5.3392 9.8701 20 6 -1.8678 6.4500 9.5085 21 6 -2.0901 7.7634 10.2132 22 8 -2.6119 8.7185 9.2871 23 14 -3.3028 7.5229 11.6068 24 6 -0.9252 6.3582 8.5009 25 6 -0.7192 5.1556 7.8531 26 6 2.1234 -0.4787 3.7525 27 1 -0.3633 0.5140 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 1.5952 -1.7203 -1.1994 31 1 1.5953 -0.1788 -2.0894 32 1 3.0486 -0.6930 -1.1992 33 1 1.5239 -1.6910 1.2455 34 1 3.0450 -0.7708 1.1558 35 1 -0.6005 0.4817 2.7731 36 1 -0.1562 -1.2793 2.7197 37 1 1.2554 1.8913 4.6239 38 1 0.6979 3.1076 6.9634 39 1 -0.5442 3.5415 5.7645 40 1 -3.3425 5.4134 10.6574 41 1 -1.1433 8.1256 10.6138 42 1 -2.7800 9.5891 9.6728 43 1 -4.5978 7.0293 11.0736 44 1 -2.7578 6.5558 12.5931 45 1 -0.3494 7.2277 8.2200 46 1 0.0169 5.0849 7.0660 47 1 2.3432 -1.5450 3.7002 48 1 2.9479 0.1036 4.1639 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:34:07 Heat of formation + Delta-G solvation = 68.187325 kcal Electronic energy + Delta-G solvation = -28837.955267 eV Core-core repulsion = 24640.062578 eV Total energy + Delta-G solvation = -4197.892689 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.096 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.32266 -41.76051 -40.86577 -39.49629 -38.76909 -37.29513 -34.70500 -33.68572 -32.36895 -30.89683 -30.34916 -29.54232 -29.22845 -26.73105 -26.44702 -25.80325 -24.37494 -23.73686 -22.50020 -21.98842 -20.68078 -19.68710 -19.09766 -18.64402 -18.34271 -17.86162 -17.63009 -17.43452 -17.16972 -17.04711 -16.65046 -16.29414 -15.89025 -15.73484 -15.25727 -15.17127 -14.90787 -14.60681 -14.39411 -14.20882 -14.02019 -13.91410 -13.80559 -13.74969 -13.57039 -13.53494 -13.30782 -13.07524 -12.77586 -12.60219 -12.36612 -12.26897 -12.19336 -12.15169 -11.91548 -11.70795 -11.41209 -11.39001 -11.12289 -10.35612 -10.22395 -10.17401 -9.45591 -5.03893 -0.20780 -0.08045 0.44008 1.03017 1.24268 1.28205 1.34847 1.54341 1.90041 2.23323 2.36644 2.86803 2.95343 3.19566 3.24010 3.33557 3.37667 3.45824 3.55051 3.68078 3.74734 3.76272 3.77329 3.93566 3.95058 3.99630 4.01767 4.17010 4.17772 4.19926 4.27258 4.33008 4.40237 4.51105 4.56161 4.64259 4.68839 4.70468 4.75566 4.77256 4.83095 4.87933 4.88418 4.92618 5.00727 5.10663 5.16485 5.30413 5.47396 5.93533 6.35459 6.87703 7.07175 Molecular weight = 400.10amu Principal moments of inertia in cm(-1) A = 0.013771 B = 0.001803 C = 0.001665 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2032.703620 B =15529.222147 C =16817.413416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.367 5.367 3 H 0.440 0.560 4 C -0.047 4.047 5 C 0.007 3.993 6 C -0.115 4.115 7 H 0.137 0.863 8 C -0.153 4.153 9 C 0.090 3.910 10 H 0.063 0.937 11 N -0.689 5.689 12 C 0.514 3.486 13 O -0.569 6.569 14 C 0.026 3.974 15 O -0.306 6.306 16 C 0.154 3.846 17 C -0.144 4.144 18 Br -0.052 7.052 19 C -0.079 4.079 20 C -0.120 4.120 21 C -0.055 4.055 22 O -0.559 6.559 23 Si 0.740 3.260 24 C -0.029 4.029 25 C -0.186 4.186 26 C -0.125 4.125 27 H 0.117 0.883 28 H 0.127 0.873 29 H 0.117 0.883 30 H 0.115 0.885 31 H 0.124 0.876 32 H 0.128 0.872 33 H 0.132 0.868 34 H 0.151 0.849 35 H 0.081 0.919 36 H 0.106 0.894 37 H 0.424 0.576 38 H 0.130 0.870 39 H 0.135 0.865 40 H 0.117 0.883 41 H 0.109 0.891 42 H 0.406 0.594 43 H -0.302 1.302 44 H -0.293 1.293 45 H 0.169 0.831 46 H 0.189 0.811 47 H 0.108 0.892 48 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.731 -6.491 -36.734 42.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.056 4.944 3 H 0.277 0.723 4 C -0.188 4.188 5 C -0.115 4.115 6 C -0.133 4.133 7 H 0.155 0.845 8 C -0.192 4.192 9 C -0.015 4.015 10 H 0.082 0.918 11 N -0.344 5.344 12 C 0.300 3.700 13 O -0.447 6.447 14 C -0.051 4.051 15 O -0.218 6.218 16 C 0.106 3.894 17 C -0.224 4.224 18 Br 0.033 6.967 19 C -0.098 4.098 20 C -0.121 4.121 21 C -0.167 4.167 22 O -0.370 6.370 23 Si 0.649 3.351 24 C -0.047 4.047 25 C -0.205 4.205 26 C -0.164 4.164 27 H 0.135 0.865 28 H 0.145 0.855 29 H 0.135 0.865 30 H 0.134 0.866 31 H 0.143 0.857 32 H 0.147 0.853 33 H 0.151 0.849 34 H 0.169 0.831 35 H 0.100 0.900 36 H 0.124 0.876 37 H 0.263 0.737 38 H 0.148 0.852 39 H 0.153 0.847 40 H 0.134 0.866 41 H 0.127 0.873 42 H 0.257 0.743 43 H -0.230 1.230 44 H -0.221 1.221 45 H 0.187 0.813 46 H 0.206 0.794 47 H 0.127 0.873 48 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 19.202 -9.204 -36.191 41.991 hybrid contribution 0.121 0.233 0.318 0.413 sum 19.323 -8.971 -35.873 41.722 Atomic orbital electron populations 1.24265 0.76880 1.09426 1.09412 1.44807 1.15410 1.19567 1.14611 0.72274 1.24124 1.05853 1.02234 0.86638 1.23931 1.06152 0.99360 0.82037 1.23004 0.95272 1.02316 0.92717 0.84511 1.23800 0.97221 1.04056 0.94081 1.22030 0.99989 0.83872 0.95625 0.91828 1.45228 1.40056 1.13022 1.36134 1.20428 0.80126 0.89478 0.79978 1.90830 1.43811 1.48667 1.61352 1.22973 0.94195 0.96286 0.91669 1.86248 1.57092 1.29248 1.49207 1.18662 0.93465 0.86146 0.91167 1.21078 1.03490 0.94057 1.03731 1.96760 1.70488 1.37575 1.91899 1.20773 0.98619 0.91847 0.98603 1.19589 0.98784 0.93529 1.00218 1.24372 1.05669 0.88442 0.98168 1.86413 1.86623 1.25562 1.38356 0.94611 0.76245 0.87279 0.76945 1.21342 0.94086 0.98254 0.91033 1.21715 1.03062 0.90949 1.04740 1.23265 0.95248 1.03794 0.94082 0.86500 0.85453 0.86456 0.86610 0.85705 0.85327 0.84940 0.83127 0.90031 0.87556 0.73734 0.85235 0.84738 0.86559 0.87307 0.74263 1.23014 1.22070 0.81309 0.79423 0.87319 0.89253 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.58 8.57 127.69 1.09 4.67 16 2 N -0.37 24.71 0.66 -948.84 -0.62 24.09 16 3 H 0.44 -31.58 8.41 -89.69 -0.75 -32.34 16 4 C -0.05 3.02 9.19 127.69 1.17 4.20 16 5 C 0.01 -0.45 4.57 86.30 0.39 -0.06 16 6 C -0.11 6.35 3.18 -10.27 -0.03 6.32 16 7 H 0.14 -8.21 8.09 -2.39 -0.02 -8.23 16 8 C -0.15 6.97 5.69 31.12 0.18 7.15 16 9 C 0.09 -3.20 4.32 45.52 0.20 -3.01 16 10 H 0.06 -1.57 7.47 -2.38 -0.02 -1.59 16 11 N -0.69 23.57 5.26 -440.04 -2.32 21.25 16 12 C 0.51 -11.14 7.91 87.66 0.69 -10.45 16 13 O -0.57 4.26 16.10 16.01 0.26 4.52 16 14 C 0.03 -0.65 5.22 71.24 0.37 -0.28 16 15 O -0.31 3.53 9.01 -73.58 -0.66 2.87 16 16 C 0.15 -1.70 6.68 22.52 0.15 -1.55 16 17 C -0.14 0.66 6.24 22.40 0.14 0.80 16 18 Br -0.05 0.06 33.16 -20.37 -0.68 -0.62 16 19 C -0.08 0.40 8.40 22.27 0.19 0.59 16 20 C -0.12 1.26 5.38 -19.85 -0.11 1.15 16 21 C -0.05 0.80 2.79 71.24 0.20 1.00 16 22 O -0.56 8.48 12.81 -148.98 -1.91 6.57 16 23 Si 0.74 -8.50 29.85 68.60 2.05 -6.45 16 24 C -0.03 0.48 9.68 22.26 0.22 0.70 16 25 C -0.19 3.54 9.04 22.36 0.20 3.74 16 26 C -0.13 5.67 7.39 31.12 0.23 5.90 16 27 H 0.12 -7.02 5.13 -2.39 -0.01 -7.03 16 28 H 0.13 -7.96 8.14 -2.39 -0.02 -7.98 16 29 H 0.12 -7.11 8.11 -2.39 -0.02 -7.13 16 30 H 0.12 -7.26 8.14 -2.39 -0.02 -7.28 16 31 H 0.12 -7.99 8.14 -2.39 -0.02 -8.01 16 32 H 0.13 -8.36 8.11 -2.39 -0.02 -8.38 16 33 H 0.13 -8.20 7.79 -2.39 -0.02 -8.22 16 34 H 0.15 -9.80 8.09 -2.38 -0.02 -9.82 16 35 H 0.08 -3.59 7.18 -2.39 -0.02 -3.61 16 36 H 0.11 -4.87 7.90 -2.38 -0.02 -4.89 16 37 H 0.42 -18.37 8.70 -92.71 -0.81 -19.17 16 38 H 0.13 -4.09 7.66 -2.39 -0.02 -4.11 16 39 H 0.14 -4.45 7.66 -2.39 -0.02 -4.47 16 40 H 0.12 -0.32 4.86 -2.91 -0.01 -0.33 16 41 H 0.11 -2.20 7.96 -2.39 -0.02 -2.22 16 42 H 0.41 -9.99 8.74 -74.06 -0.65 -10.64 16 43 H -0.30 0.79 7.05 99.48 0.70 1.49 16 44 H -0.29 1.39 7.11 99.48 0.71 2.10 16 45 H 0.17 -3.78 8.06 -2.91 -0.02 -3.81 16 46 H 0.19 -5.60 6.30 -2.91 -0.02 -5.61 16 47 H 0.11 -4.88 8.10 -2.39 -0.02 -4.90 16 48 H 0.09 -3.95 8.14 -2.39 -0.02 -3.97 16 Total: 1.00 -97.27 402.14 0.23 -97.04 By element: Atomic # 1 Polarization: -168.97 SS G_CDS: -1.17 Total: -170.14 kcal Atomic # 6 Polarization: 15.59 SS G_CDS: 5.29 Total: 20.88 kcal Atomic # 7 Polarization: 48.28 SS G_CDS: -2.94 Total: 45.34 kcal Atomic # 8 Polarization: 16.27 SS G_CDS: -2.31 Total: 13.96 kcal Atomic # 14 Polarization: -8.50 SS G_CDS: 2.05 Total: -6.45 kcal Atomic # 35 Polarization: 0.06 SS G_CDS: -0.68 Total: -0.62 kcal Total: -97.27 0.23 -97.04 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 165.223 kcal (2) G-P(sol) polarization free energy of solvation -97.269 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -97.036 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.187 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds