Wall clock time and date at job start Sun Mar 7 2021 06:34:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33814 * 122.44995 * 2 1 4 4 C 1.50703 * 124.52206 * 359.94225 * 3 2 1 5 5 O 1.42905 * 109.47264 * 330.00001 * 4 3 2 6 6 Si 1.86299 * 109.47187 * 210.00143 * 4 3 2 7 7 S 1.70609 * 110.95823 * 180.20937 * 3 2 1 8 8 C 1.75833 * 91.56148 * 359.70412 * 7 3 2 9 9 C 1.46584 * 125.45978 * 180.09437 * 8 7 3 10 10 O 1.21702 * 120.00343 * 180.23143 * 9 8 7 11 11 N 1.34775 * 120.00212 * 0.23237 * 9 8 7 12 12 C 1.46496 * 120.00323 * 179.97438 * 11 9 8 13 13 H 1.08997 * 112.84912 * 25.33646 * 12 11 9 14 14 C 1.53782 * 113.61620 * 156.52494 * 12 11 9 15 15 C 1.53781 * 87.08009 * 89.11551 * 14 12 11 16 16 H 1.09002 * 113.62083 * 270.80093 * 15 14 12 17 17 C 1.52998 * 113.61262 * 139.98012 * 15 14 12 18 18 N 1.46900 * 109.47314 * 175.00375 * 17 15 14 19 19 H 1.00903 * 109.47074 * 304.99986 * 18 17 15 20 20 C 1.46904 * 109.47044 * 64.99989 * 18 17 15 21 21 C 1.46901 * 109.47583 * 185.00313 * 18 17 15 22 22 C 1.53775 * 113.61817 * 254.13444 * 12 11 9 23 23 C 1.36644 * 109.08255 * 0.29085 * 8 7 3 24 24 H 1.08996 * 109.47153 * 89.99817 * 1 2 3 25 25 H 1.08997 * 109.47305 * 209.99771 * 1 2 3 26 26 H 1.09001 * 109.47363 * 330.00051 * 1 2 3 27 27 H 1.09004 * 109.47113 * 89.99999 * 4 3 2 28 28 H 0.96702 * 113.99404 * 300.00033 * 5 4 3 29 29 H 1.48493 * 110.00018 * 58.68120 * 6 4 3 30 30 H 1.48504 * 109.99873 * 180.02562 * 6 4 3 31 31 H 0.97009 * 120.00023 * 359.97438 * 11 9 8 32 32 H 1.09000 * 113.61951 * 203.66579 * 14 12 11 33 33 H 1.09002 * 113.61343 * 334.48854 * 14 12 11 34 34 H 1.09003 * 109.47329 * 295.00609 * 17 15 14 35 35 H 1.08998 * 109.47354 * 55.00674 * 17 15 14 36 36 H 1.08995 * 109.47304 * 60.00115 * 20 18 17 37 37 H 1.09003 * 109.46694 * 180.02562 * 20 18 17 38 38 H 1.09000 * 109.47076 * 300.00007 * 20 18 17 39 39 H 1.08992 * 109.47380 * 59.99460 * 21 18 17 40 40 H 1.08993 * 109.47130 * 180.02562 * 21 18 17 41 41 H 1.09003 * 109.46636 * 300.00125 * 21 18 17 42 42 H 1.09010 * 113.61156 * 25.43247 * 22 12 11 43 43 H 1.09001 * 113.61547 * 156.33268 * 22 12 11 44 44 H 1.08004 * 123.35385 * 179.79644 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 -0.0013 5 8 0.3759 2.4978 -0.6760 6 14 2.7932 3.6822 -0.8792 7 16 3.8969 0.7893 -0.0058 8 6 3.5937 -0.9427 0.0008 9 6 4.6231 -1.9862 0.0018 10 8 4.3002 -3.1596 0.0023 11 7 5.9273 -1.6463 0.0021 12 6 6.9561 -2.6891 0.0036 13 1 6.6073 -3.6284 -0.4255 14 6 8.3091 -2.2206 -0.5574 15 6 8.6659 -1.7919 0.8757 16 1 8.3692 -0.7702 1.1126 17 6 10.1147 -2.0948 1.2632 18 7 10.3902 -1.5441 2.5969 19 1 10.1685 -0.5598 2.6068 20 6 9.5673 -2.2415 3.5942 21 6 11.8115 -1.7290 2.9191 22 6 7.6623 -2.8559 1.3594 23 6 2.2446 -1.1600 0.0005 24 1 -0.3633 0.0000 -1.0276 25 1 -0.3634 -0.8900 0.5138 26 1 -0.3634 0.8900 0.5138 27 1 1.4925 2.8511 1.0262 28 1 0.4275 2.2088 -1.5974 29 1 3.0214 3.2189 -2.2714 30 1 2.2235 5.0536 -0.8867 31 1 6.1848 -0.7110 0.0013 32 1 8.9291 -3.0326 -0.9374 33 1 8.2273 -1.3879 -1.2560 34 1 10.2693 -3.1737 1.2765 35 1 10.7879 -1.6402 0.5364 36 1 9.8068 -3.3048 3.5835 37 1 9.7714 -1.8326 4.5838 38 1 8.5127 -2.1042 3.3552 39 1 12.4221 -1.2117 2.1792 40 1 12.0157 -1.3209 3.9089 41 1 12.0510 -2.7924 2.9084 42 1 7.0588 -2.5348 2.2085 43 1 8.1057 -3.8413 1.5025 44 1 1.8019 -2.1452 0.0008 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608396_6739946.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:34:26 Heat of formation + Delta-G solvation = 121.107494 kcal Electronic energy + Delta-G solvation = -23902.341516 eV Core-core repulsion = 20454.396058 eV Total energy + Delta-G solvation = -3447.945457 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.142 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -44.56270 -42.39014 -41.09119 -40.27085 -38.22180 -35.86675 -33.16392 -32.17538 -31.97809 -31.03592 -28.61965 -28.34001 -27.37825 -25.91838 -25.21029 -23.09562 -22.38989 -21.44430 -21.00073 -20.54071 -20.09596 -19.76096 -18.79536 -18.30209 -18.14873 -17.52390 -17.48474 -17.22205 -16.81342 -16.73425 -16.31843 -16.16253 -16.04559 -15.97479 -15.78886 -15.58453 -15.39650 -15.22263 -15.15218 -14.68746 -14.67243 -14.33789 -14.10779 -13.90188 -13.78462 -13.42151 -13.15829 -13.14022 -13.04066 -12.69186 -12.17545 -11.68254 -11.46919 -10.55321 -10.27101 -5.99576 -1.52077 -1.47210 -0.58836 -0.18131 0.23301 0.47219 0.48732 0.52273 0.68372 0.74337 0.75064 1.12063 1.16585 1.27290 1.36865 1.59844 1.65443 1.76286 1.83014 1.92550 1.99419 2.12410 2.17163 2.27614 2.31252 2.33949 2.38014 2.64022 2.76983 2.93196 2.95338 3.08344 3.18949 3.28410 3.29165 3.45755 3.49035 3.65141 3.80901 3.97894 4.08630 4.12753 4.24138 4.58861 4.69358 5.15045 5.47471 5.99455 Molecular weight = 312.14amu Principal moments of inertia in cm(-1) A = 0.018874 B = 0.003398 C = 0.003086 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1483.173683 B = 8238.816260 C = 9070.121274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.096 4.096 3 C -0.224 4.224 4 C -0.035 4.035 5 O -0.514 6.514 6 Si 0.661 3.339 7 S 0.192 5.808 8 C -0.275 4.275 9 C 0.600 3.400 10 O -0.515 6.515 11 N -0.718 5.718 12 C 0.126 3.874 13 H 0.116 0.884 14 C -0.130 4.130 15 C -0.149 4.149 16 H 0.113 0.887 17 C 0.000 4.000 18 N -0.386 5.386 19 H 0.426 0.574 20 C -0.056 4.056 21 C -0.048 4.048 22 C -0.159 4.159 23 C -0.036 4.036 24 H 0.072 0.928 25 H 0.066 0.934 26 H 0.086 0.914 27 H 0.131 0.869 28 H 0.380 0.620 29 H -0.246 1.246 30 H -0.235 1.235 31 H 0.399 0.601 32 H 0.110 0.890 33 H 0.091 0.909 34 H 0.132 0.868 35 H 0.133 0.867 36 H 0.122 0.878 37 H 0.123 0.877 38 H 0.126 0.874 39 H 0.123 0.877 40 H 0.124 0.876 41 H 0.122 0.878 42 H 0.086 0.914 43 H 0.104 0.896 44 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 27.352 -2.732 10.073 29.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.108 4.108 3 C -0.343 4.343 4 C -0.147 4.147 5 O -0.321 6.321 6 Si 0.558 3.442 7 S 0.460 5.540 8 C -0.395 4.395 9 C 0.387 3.613 10 O -0.391 6.391 11 N -0.370 5.370 12 C 0.020 3.980 13 H 0.134 0.866 14 C -0.169 4.169 15 C -0.167 4.167 16 H 0.131 0.869 17 C -0.121 4.121 18 N 0.039 4.961 19 H 0.261 0.739 20 C -0.198 4.198 21 C -0.190 4.190 22 C -0.197 4.197 23 C -0.070 4.070 24 H 0.091 0.909 25 H 0.085 0.915 26 H 0.105 0.895 27 H 0.148 0.852 28 H 0.229 0.771 29 H -0.170 1.170 30 H -0.158 1.158 31 H 0.234 0.766 32 H 0.128 0.872 33 H 0.110 0.890 34 H 0.150 0.850 35 H 0.151 0.849 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.144 0.856 39 H 0.142 0.858 40 H 0.143 0.857 41 H 0.140 0.860 42 H 0.104 0.896 43 H 0.123 0.877 44 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 28.406 -2.198 9.960 30.182 hybrid contribution -2.069 -0.543 -0.678 2.244 sum 26.337 -2.741 9.282 28.059 Atomic orbital electron populations 1.20682 0.88332 1.03752 1.03028 1.18779 0.98717 0.90546 1.02751 1.24460 0.98300 1.00952 1.10632 1.24502 0.91444 0.94934 1.03781 1.86677 1.27200 1.89081 1.29149 0.95904 0.84408 0.80452 0.83409 1.82418 1.03731 0.98166 1.69678 1.24425 0.97754 0.96841 1.20465 1.16948 0.81327 0.87532 0.75474 1.90906 1.81373 1.18238 1.48589 1.45486 1.05097 1.09320 1.77144 1.21683 0.87077 0.93432 0.95797 0.86579 1.23326 0.96326 1.03281 0.93956 1.23323 0.90838 1.01733 1.00839 0.86945 1.24116 1.01305 1.04917 0.81758 1.45082 1.16048 1.19106 1.15850 0.73883 1.24320 0.99479 1.02351 0.93612 1.24141 0.77714 1.09222 1.07922 1.23890 0.97328 0.98903 0.99589 1.20791 0.90928 1.00304 0.94962 0.90939 0.91547 0.89480 0.85160 0.77131 1.16999 1.15806 0.76598 0.87215 0.89034 0.85002 0.84913 0.85927 0.85836 0.85554 0.85825 0.85730 0.85985 0.89556 0.87723 0.82599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.87 8.67 36.01 0.31 1.18 16 2 C -0.10 0.85 5.75 -106.45 -0.61 0.24 16 3 C -0.22 2.29 5.54 -35.86 -0.20 2.09 16 4 C -0.04 0.36 2.76 36.01 0.10 0.46 16 5 O -0.51 4.38 9.86 -35.23 -0.35 4.04 16 6 Si 0.66 -7.03 31.30 -169.99 -5.32 -12.35 16 7 S 0.19 -2.48 19.78 -107.50 -2.13 -4.61 16 8 C -0.28 2.85 6.45 -36.79 -0.24 2.61 16 9 C 0.60 -6.41 7.78 -12.90 -0.10 -6.51 16 10 O -0.52 3.26 16.46 5.19 0.09 3.35 16 11 N -0.72 11.55 5.26 -54.36 -0.29 11.26 16 12 C 0.13 -2.33 4.29 -67.12 -0.29 -2.62 16 13 H 0.12 -1.76 7.50 -51.93 -0.39 -2.15 16 14 C -0.13 2.94 7.38 -25.92 -0.19 2.75 16 15 C -0.15 4.01 3.20 -89.66 -0.29 3.72 16 16 H 0.11 -3.16 8.09 -51.93 -0.42 -3.58 16 17 C 0.00 -0.01 4.57 -3.82 -0.02 -0.03 16 18 N -0.39 12.78 0.66 -251.26 -0.17 12.61 16 19 H 0.43 -14.89 8.40 -39.29 -0.33 -15.22 16 20 C -0.06 1.74 8.57 60.07 0.51 2.26 16 21 C -0.05 1.55 9.19 60.07 0.55 2.10 16 22 C -0.16 3.67 5.71 -25.78 -0.15 3.52 16 23 C -0.04 0.31 9.80 -40.44 -0.40 -0.08 16 24 H 0.07 -0.65 8.14 -51.93 -0.42 -1.08 16 25 H 0.07 -0.58 8.13 -51.93 -0.42 -1.00 16 26 H 0.09 -0.69 6.42 -51.93 -0.33 -1.02 16 27 H 0.13 -1.44 7.96 -51.93 -0.41 -1.85 16 28 H 0.38 -4.10 8.66 45.56 0.39 -3.70 16 29 H -0.25 2.03 7.11 56.52 0.40 2.44 16 30 H -0.24 1.63 7.11 56.52 0.40 2.04 16 31 H 0.40 -7.44 7.82 -40.82 -0.32 -7.76 16 32 H 0.11 -2.52 8.10 -51.93 -0.42 -2.94 16 33 H 0.09 -1.97 8.14 -51.93 -0.42 -2.39 16 34 H 0.13 -4.05 7.79 -51.93 -0.40 -4.45 16 35 H 0.13 -4.16 8.09 -51.93 -0.42 -4.58 16 36 H 0.12 -3.77 8.11 -51.93 -0.42 -4.19 16 37 H 0.12 -3.86 8.14 -51.93 -0.42 -4.29 16 38 H 0.13 -3.79 5.13 -51.93 -0.27 -4.06 16 39 H 0.12 -3.95 8.11 -51.93 -0.42 -4.37 16 40 H 0.12 -3.97 8.14 -51.93 -0.42 -4.39 16 41 H 0.12 -3.84 8.14 -51.93 -0.42 -4.26 16 42 H 0.09 -1.92 7.19 -51.92 -0.37 -2.29 16 43 H 0.10 -2.50 7.90 -51.93 -0.41 -2.91 16 44 H 0.16 -1.29 8.06 -52.48 -0.42 -1.72 16 LS Contribution 359.39 15.07 5.42 5.42 Total: 1.00 -37.51 359.39 -10.85 -48.35 By element: Atomic # 1 Polarization: -72.65 SS G_CDS: -7.11 Total: -79.75 kcal Atomic # 6 Polarization: 12.69 SS G_CDS: -1.00 Total: 11.69 kcal Atomic # 7 Polarization: 24.32 SS G_CDS: -0.45 Total: 23.87 kcal Atomic # 8 Polarization: 7.65 SS G_CDS: -0.26 Total: 7.38 kcal Atomic # 14 Polarization: -7.03 SS G_CDS: -5.32 Total: -12.35 kcal Atomic # 16 Polarization: -2.48 SS G_CDS: -2.13 Total: -4.61 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -37.51 -10.85 -48.35 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_6739946.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.462 kcal (2) G-P(sol) polarization free energy of solvation -37.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 131.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.847 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.354 kcal (6) G-S(sol) free energy of system = (1) + (5) 121.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds