Wall clock time and date at job start Sun Mar 7 2021 06:34:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.37938 * 120.07580 * 2 1 4 4 C 1.38388 * 120.14855 * 180.27834 * 3 2 1 5 5 C 1.50693 * 119.85521 * 179.72253 * 4 3 2 6 6 C 1.38341 * 120.28684 * 359.74242 * 4 3 2 7 7 C 1.50702 * 119.92351 * 180.02562 * 6 4 3 8 8 O 1.42910 * 109.46822 * 285.02166 * 7 6 4 9 9 Si 1.86294 * 109.47238 * 165.02296 * 7 6 4 10 10 C 1.37969 * 120.15077 * 0.02562 * 6 4 3 11 11 C 1.39564 * 119.85011 * 359.97438 * 10 6 4 12 12 C 1.47849 * 120.14350 * 179.97438 * 11 10 6 13 13 O 1.21550 * 120.00166 * 173.75504 * 12 11 10 14 14 N 1.34773 * 119.99992 * 353.75139 * 12 11 10 15 15 C 1.46502 * 120.00261 * 180.02562 * 14 12 11 16 16 H 1.09003 * 112.90296 * 336.25372 * 15 14 12 17 17 C 1.54052 * 113.61204 * 107.61775 * 15 14 12 18 18 C 1.53772 * 87.07691 * 89.07710 * 17 15 14 19 19 H 1.09005 * 113.69167 * 270.86602 * 18 17 15 20 20 C 1.53001 * 113.61663 * 139.97835 * 18 17 15 21 21 N 1.46894 * 109.47224 * 87.50137 * 20 18 17 22 22 H 1.00904 * 109.46966 * 305.00363 * 21 20 18 23 23 C 1.46895 * 109.47130 * 65.00155 * 21 20 18 24 24 C 1.46898 * 109.47224 * 185.00331 * 21 20 18 25 25 C 1.53774 * 113.61783 * 205.00212 * 15 14 12 26 26 H 1.09005 * 109.46889 * 263.62368 * 1 2 3 27 27 H 1.08997 * 109.47273 * 23.61823 * 1 2 3 28 28 H 1.08996 * 109.47101 * 143.62556 * 1 2 3 29 29 H 1.08003 * 119.92623 * 0.02591 * 3 2 1 30 30 H 1.08998 * 109.47546 * 270.02064 * 5 4 3 31 31 H 1.09007 * 109.47129 * 30.02457 * 5 4 3 32 32 H 1.09007 * 109.47444 * 150.01603 * 5 4 3 33 33 H 1.08997 * 109.47245 * 45.01773 * 7 6 4 34 34 H 0.96695 * 113.99822 * 300.00542 * 8 7 6 35 35 H 1.48503 * 109.99988 * 179.97438 * 9 7 6 36 36 H 1.48497 * 109.99811 * 301.31635 * 9 7 6 37 37 H 1.07993 * 120.08064 * 179.97438 * 10 6 4 38 38 H 0.97001 * 120.00287 * 0.02562 * 14 12 11 39 39 H 1.09004 * 113.62193 * 334.52631 * 17 15 14 40 40 H 1.09001 * 113.68680 * 203.63617 * 17 15 14 41 41 H 1.08998 * 109.47327 * 207.50514 * 20 18 17 42 42 H 1.08998 * 109.46774 * 327.50237 * 20 18 17 43 43 H 1.09004 * 109.47059 * 180.02562 * 23 21 20 44 44 H 1.08998 * 109.47521 * 300.00155 * 23 21 20 45 45 H 1.09002 * 109.47175 * 60.00534 * 23 21 20 46 46 H 1.09000 * 109.47381 * 59.99887 * 24 21 20 47 47 H 1.08995 * 109.47704 * 180.02562 * 24 21 20 48 48 H 1.08999 * 109.47013 * 300.00023 * 24 21 20 49 49 H 1.08998 * 113.61792 * 156.33474 * 25 15 14 50 50 H 1.09003 * 113.61326 * 25.51251 * 25 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5821 1.1954 -0.0058 5 6 4.3306 2.5033 -0.0121 6 6 4.2813 0.0017 -0.0063 7 6 5.7883 0.0132 -0.0121 8 8 6.2569 0.3637 -1.3158 9 14 6.4239 -1.6779 0.4425 10 6 3.6021 -1.1992 -0.0015 11 6 2.2065 -1.2080 0.0044 12 6 1.4722 -2.4912 0.0090 13 8 0.2626 -2.4988 0.1286 14 7 2.1439 -3.6525 -0.1195 15 6 1.4162 -4.9240 -0.1156 16 1 0.4527 -4.8598 0.3900 17 6 1.3460 -5.5991 -1.4985 18 6 2.6702 -6.2935 -1.1395 19 1 3.5547 -5.7224 -1.4215 20 6 2.7379 -7.7543 -1.5894 21 7 3.2411 -7.8193 -2.9679 22 1 2.6670 -7.2412 -3.5631 23 6 4.6278 -7.3362 -3.0062 24 6 3.1934 -9.2090 -3.4416 25 6 2.2699 -6.1210 0.3353 26 1 -0.3633 -0.1141 1.0214 27 1 -0.3633 0.9415 -0.4117 28 1 -0.3633 -0.8274 -0.6094 29 1 1.6582 2.1290 0.0004 30 1 4.5064 2.8164 -1.0412 31 1 3.7409 3.2619 0.5028 32 1 5.2858 2.3778 0.4978 33 1 6.1488 0.7437 0.7121 34 1 5.9734 -0.2443 -2.0122 35 1 7.9089 -1.6799 0.4398 36 1 5.9175 -2.0674 1.7830 37 1 4.1491 -2.1304 -0.0023 38 1 3.1092 -3.6465 -0.2147 39 1 1.4310 -4.9001 -2.3306 40 1 0.5077 -6.2872 -1.6078 41 1 3.4087 -8.3065 -0.9312 42 1 1.7418 -8.1946 -1.5451 43 1 5.0011 -7.3841 -4.0292 44 1 4.6633 -6.3051 -2.6548 45 1 5.2480 -7.9608 -2.3633 46 1 2.1644 -9.5675 -3.4132 47 1 3.5672 -9.2574 -4.4643 48 1 3.8135 -9.8335 -2.7986 49 1 1.6840 -6.9517 0.7287 50 1 3.1012 -5.8447 0.9839 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_9599494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:34:40 Heat of formation + Delta-G solvation = 87.673271 kcal Electronic energy + Delta-G solvation = -27943.638319 eV Core-core repulsion = 24249.553179 eV Total energy + Delta-G solvation = -3694.085140 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.201 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.21516 -41.61468 -40.32830 -39.02515 -37.60645 -34.97049 -34.45823 -33.13091 -30.24003 -29.32847 -29.22669 -28.53922 -26.77773 -25.89289 -25.54712 -24.02787 -23.65373 -22.59271 -21.13167 -20.32681 -19.34127 -18.99001 -17.71857 -17.50900 -17.45009 -17.08143 -16.62918 -16.45575 -16.25240 -16.14176 -15.72705 -15.39448 -15.09635 -14.87453 -14.61603 -14.52433 -14.21078 -14.00938 -13.91587 -13.69345 -13.50949 -13.45484 -13.40499 -13.15688 -13.14635 -13.06579 -12.95527 -12.75926 -12.65482 -12.55065 -12.16178 -11.93780 -11.87757 -11.61916 -11.27803 -10.76944 -10.43943 -10.18341 -9.94677 -9.66029 -5.18838 -0.30994 0.11712 1.10441 1.25703 1.63056 1.70991 2.00252 2.02548 2.59656 2.98976 3.03300 3.25171 3.40064 3.46721 3.48350 3.50724 3.58731 3.70400 3.74328 3.82946 3.86300 3.97804 4.10833 4.14109 4.25683 4.33187 4.39410 4.43793 4.46141 4.49646 4.52887 4.58161 4.61520 4.67980 4.71867 4.74371 4.80151 4.82333 4.84679 4.90800 4.91173 4.94646 4.96966 5.02896 5.07360 5.10624 5.17832 5.24264 5.42155 5.45512 5.60521 5.73433 6.44351 6.80019 7.15820 Molecular weight = 320.20amu Principal moments of inertia in cm(-1) A = 0.012459 B = 0.004046 C = 0.003299 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2246.908192 B = 6918.363200 C = 8486.379427 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.027 4.027 3 C -0.143 4.143 4 C -0.036 4.036 5 C -0.123 4.123 6 C -0.140 4.140 7 C -0.089 4.089 8 O -0.552 6.552 9 Si 0.803 3.197 10 C -0.056 4.056 11 C -0.157 4.157 12 C 0.561 3.439 13 O -0.563 6.563 14 N -0.695 5.695 15 C 0.091 3.909 16 H 0.070 0.930 17 C -0.150 4.150 18 C -0.122 4.122 19 H 0.139 0.861 20 C 0.008 3.992 21 N -0.372 5.372 22 H 0.436 0.564 23 C -0.057 4.057 24 C -0.047 4.047 25 C -0.129 4.129 26 H 0.065 0.935 27 H 0.065 0.935 28 H 0.085 0.915 29 H 0.134 0.866 30 H 0.081 0.919 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.100 0.900 34 H 0.395 0.605 35 H -0.303 1.303 36 H -0.283 1.283 37 H 0.166 0.834 38 H 0.416 0.584 39 H 0.079 0.921 40 H 0.108 0.892 41 H 0.144 0.856 42 H 0.138 0.862 43 H 0.125 0.875 44 H 0.129 0.871 45 H 0.123 0.877 46 H 0.121 0.879 47 H 0.124 0.876 48 H 0.120 0.880 49 H 0.110 0.890 50 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.091 -27.903 -13.007 31.056 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.028 4.028 3 C -0.161 4.161 4 C -0.036 4.036 5 C -0.179 4.179 6 C -0.140 4.140 7 C -0.197 4.197 8 O -0.360 6.360 9 Si 0.708 3.292 10 C -0.073 4.073 11 C -0.160 4.160 12 C 0.350 3.650 13 O -0.443 6.443 14 N -0.348 5.348 15 C -0.015 4.015 16 H 0.088 0.912 17 C -0.188 4.188 18 C -0.140 4.140 19 H 0.156 0.844 20 C -0.114 4.114 21 N 0.052 4.948 22 H 0.273 0.727 23 C -0.199 4.199 24 C -0.189 4.189 25 C -0.168 4.168 26 H 0.084 0.916 27 H 0.084 0.916 28 H 0.104 0.896 29 H 0.152 0.848 30 H 0.100 0.900 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.117 0.883 34 H 0.245 0.755 35 H -0.231 1.231 36 H -0.211 1.211 37 H 0.183 0.817 38 H 0.255 0.745 39 H 0.098 0.902 40 H 0.126 0.874 41 H 0.162 0.838 42 H 0.156 0.844 43 H 0.143 0.857 44 H 0.147 0.853 45 H 0.141 0.859 46 H 0.140 0.860 47 H 0.142 0.858 48 H 0.139 0.861 49 H 0.128 0.872 50 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 4.124 -28.071 -11.890 30.763 hybrid contribution -0.291 1.737 0.455 1.818 sum 3.833 -26.334 -11.436 28.965 Atomic orbital electron populations 1.21020 0.90403 1.03200 1.02898 1.20198 0.96773 0.92257 0.93588 1.21168 0.93786 0.98217 1.02907 1.20205 0.93426 0.96095 0.93893 1.20935 1.00020 0.93580 1.03349 1.20236 0.96602 0.92906 1.04293 1.25472 0.91252 1.13688 0.89280 1.86541 1.75921 1.57010 1.16488 0.94474 0.76874 0.76395 0.81444 1.21152 0.92024 0.97698 0.96457 1.19705 0.93853 0.92875 1.09606 1.18274 0.86601 0.84496 0.75672 1.90780 1.15556 1.87467 1.50489 1.45378 1.11247 1.04290 1.73864 1.22085 0.96812 0.82775 0.99801 0.91195 1.23706 0.98464 1.00083 0.96592 1.23127 0.99649 0.94529 0.96711 0.84361 1.23909 1.06724 0.99249 0.81501 1.44805 1.17022 1.17026 1.15976 0.72741 1.24261 0.79705 1.06240 1.09733 1.24107 1.09377 0.79580 1.05796 1.23302 1.00246 0.96808 0.96405 0.91640 0.91567 0.89630 0.84817 0.90003 0.91100 0.91174 0.88290 0.75469 1.23096 1.21054 0.81690 0.74550 0.90189 0.87386 0.83846 0.84396 0.85701 0.85261 0.85893 0.86018 0.85780 0.86135 0.87163 0.89471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.43 8.73 71.23 0.62 2.06 16 2 C -0.03 0.38 5.91 -19.61 -0.12 0.26 16 3 C -0.14 2.00 9.31 22.23 0.21 2.21 16 4 C -0.04 0.55 5.89 -19.81 -0.12 0.43 16 5 C -0.12 1.87 9.53 71.23 0.68 2.55 16 6 C -0.14 2.79 5.25 -19.90 -0.10 2.69 16 7 C -0.09 1.87 2.04 71.24 0.15 2.01 16 8 O -0.55 11.30 12.80 -148.98 -1.91 9.39 16 9 Si 0.80 -21.30 29.91 68.60 2.05 -19.25 16 10 C -0.06 1.37 8.13 22.53 0.18 1.55 16 11 C -0.16 2.98 5.87 -20.09 -0.12 2.86 16 12 C 0.56 -11.35 7.70 86.79 0.67 -10.68 16 13 O -0.56 6.32 12.96 -3.87 -0.05 6.27 16 14 N -0.70 22.50 5.21 -442.47 -2.31 20.20 16 15 C 0.09 -3.25 4.34 45.61 0.20 -3.05 16 16 H 0.07 -1.84 7.47 -2.39 -0.02 -1.86 16 17 C -0.15 6.93 7.44 31.21 0.23 7.16 16 18 C -0.12 6.80 3.45 -10.27 -0.04 6.76 16 19 H 0.14 -8.37 6.10 -2.38 -0.01 -8.38 16 20 C 0.01 -0.52 4.48 86.30 0.39 -0.13 16 21 N -0.37 25.27 0.66 -948.89 -0.62 24.64 16 22 H 0.44 -30.66 8.44 -89.69 -0.76 -31.42 16 23 C -0.06 3.81 8.97 127.69 1.15 4.96 16 24 C -0.05 3.03 9.19 127.69 1.17 4.20 16 25 C -0.13 5.86 7.38 31.12 0.23 6.09 16 26 H 0.06 -0.64 8.14 -2.38 -0.02 -0.66 16 27 H 0.07 -0.89 8.04 -2.39 -0.02 -0.91 16 28 H 0.09 -0.87 5.87 -2.39 -0.01 -0.88 16 29 H 0.13 -2.01 8.06 -2.91 -0.02 -2.04 16 30 H 0.08 -1.23 8.14 -2.39 -0.02 -1.25 16 31 H 0.07 -1.09 8.08 -2.38 -0.02 -1.11 16 32 H 0.07 -1.04 6.22 -2.38 -0.01 -1.05 16 33 H 0.10 -1.73 6.48 -2.39 -0.02 -1.74 16 34 H 0.40 -12.00 8.70 -74.06 -0.64 -12.64 16 35 H -0.30 5.17 7.11 99.48 0.71 5.88 16 36 H -0.28 6.01 7.11 99.48 0.71 6.72 16 37 H 0.17 -5.76 3.52 -2.91 -0.01 -5.77 16 38 H 0.42 -16.76 6.78 -92.71 -0.63 -17.38 16 39 H 0.08 -3.54 8.14 -2.39 -0.02 -3.55 16 40 H 0.11 -5.08 7.90 -2.39 -0.02 -5.09 16 41 H 0.14 -9.25 8.09 -2.39 -0.02 -9.27 16 42 H 0.14 -8.75 7.79 -2.39 -0.02 -8.77 16 43 H 0.12 -8.17 8.14 -2.38 -0.02 -8.19 16 44 H 0.13 -8.67 6.10 -2.39 -0.01 -8.68 16 45 H 0.12 -8.04 8.11 -2.39 -0.02 -8.06 16 46 H 0.12 -7.79 8.11 -2.39 -0.02 -7.81 16 47 H 0.12 -7.97 8.14 -2.39 -0.02 -7.98 16 48 H 0.12 -7.72 8.14 -2.39 -0.02 -7.74 16 49 H 0.11 -5.01 8.10 -2.39 -0.02 -5.03 16 50 H 0.09 -3.84 8.14 -2.39 -0.02 -3.86 16 Total: 1.00 -86.86 384.30 1.51 -85.34 By element: Atomic # 1 Polarization: -157.51 SS G_CDS: -1.03 Total: -158.54 kcal Atomic # 6 Polarization: 26.56 SS G_CDS: 5.38 Total: 31.94 kcal Atomic # 7 Polarization: 47.77 SS G_CDS: -2.93 Total: 44.84 kcal Atomic # 8 Polarization: 17.63 SS G_CDS: -1.96 Total: 15.67 kcal Atomic # 14 Polarization: -21.30 SS G_CDS: 2.05 Total: -19.25 kcal Total: -86.86 1.51 -85.34 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_9599494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 173.017 kcal (2) G-P(sol) polarization free energy of solvation -86.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.160 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -85.344 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.673 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds