Wall clock time and date at job start Sun Mar 7 2021 06:34:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 H 1.00896 * 109.47081 * 2 1 4 4 C 1.46906 * 109.47177 * 119.99775 * 2 1 3 5 5 C 1.46901 * 109.47014 * 239.99933 * 2 1 3 6 6 C 1.52997 * 109.47093 * 65.00131 * 5 2 1 7 7 H 1.08994 * 112.91116 * 43.74959 * 6 5 2 8 8 C 1.53787 * 113.61251 * 175.00268 * 6 5 2 9 9 C 1.53779 * 87.07963 * 139.97890 * 8 6 5 10 10 H 1.08999 * 113.61062 * 219.93155 * 9 8 6 11 11 N 1.46502 * 113.61301 * 89.11687 * 9 8 6 12 12 C 1.34783 * 119.99683 * 154.99921 * 11 9 8 13 13 O 1.21278 * 120.00208 * 359.97438 * 12 11 9 14 14 C 1.50705 * 119.99542 * 179.97438 * 12 11 9 15 15 N 1.46505 * 109.46828 * 179.97438 * 14 12 11 16 16 C 1.36823 * 125.06134 * 265.02720 * 15 14 12 17 17 C 1.34243 * 109.93570 * 179.97438 * 16 15 14 18 18 C 1.50703 * 126.50057 * 179.97438 * 17 16 15 19 19 O 1.42900 * 109.47161 * 105.02776 * 18 17 16 20 20 Si 1.86296 * 109.47136 * 345.02801 * 18 17 16 21 21 C 1.46485 * 107.00069 * 0.02562 * 17 16 15 22 22 C 1.39594 * 134.04081 * 180.02562 * 21 17 16 23 23 C 1.36665 * 119.76386 * 179.97438 * 22 21 17 24 24 C 1.38790 * 120.52716 * 0.02562 * 23 22 21 25 25 C 1.37786 * 120.66792 * 359.97438 * 24 23 22 26 26 C 1.37685 * 125.05841 * 84.72006 * 15 14 12 27 27 C 1.53779 * 87.08402 * 334.56577 * 9 8 6 28 28 H 1.08998 * 109.47593 * 60.00003 * 1 2 3 29 29 H 1.08996 * 109.47601 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47393 * 300.00488 * 1 2 3 31 31 H 1.08997 * 109.46943 * 179.97438 * 4 2 1 32 32 H 1.09000 * 109.46744 * 300.00134 * 4 2 1 33 33 H 1.08998 * 109.46705 * 59.99946 * 4 2 1 34 34 H 1.08998 * 109.46823 * 304.99780 * 5 2 1 35 35 H 1.09003 * 109.46783 * 184.99949 * 5 2 1 36 36 H 1.08997 * 113.61028 * 254.52850 * 8 6 5 37 37 H 1.08998 * 113.61447 * 25.34385 * 8 6 5 38 38 H 0.96996 * 120.00397 * 334.99617 * 11 9 8 39 39 H 1.08994 * 109.47112 * 299.99738 * 14 12 11 40 40 H 1.08996 * 109.46796 * 60.00107 * 14 12 11 41 41 H 1.08002 * 125.03739 * 359.96251 * 16 15 14 42 42 H 1.08997 * 109.47384 * 225.03015 * 18 17 16 43 43 H 0.96700 * 113.99320 * 300.00232 * 19 18 17 44 44 H 1.48498 * 110.00226 * 180.02562 * 20 18 17 45 45 H 1.48506 * 110.00285 * 301.31666 * 20 18 17 46 46 H 1.07988 * 120.11692 * 0.02562 * 22 21 17 47 47 H 1.07993 * 119.73462 * 180.02562 * 23 22 21 48 48 H 1.08001 * 119.66173 * 179.97438 * 24 23 22 49 49 H 1.08003 * 120.10938 * 180.02562 * 25 24 23 50 50 H 1.09002 * 113.61557 * 270.88569 * 27 9 8 51 51 H 1.09004 * 113.61501 * 139.97990 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6925 1.1995 5 6 1.9586 -0.6925 -1.1994 6 6 1.5539 0.0977 -2.4455 7 1 1.7106 1.1708 -2.3369 8 6 2.1233 -0.4790 -3.7525 9 6 0.7621 -0.1613 -4.3936 10 1 0.4121 -0.9325 -5.0796 11 7 0.6820 1.1860 -4.9634 12 6 -0.1885 1.4458 -5.9591 13 8 -0.9049 0.5642 -6.3837 14 6 -0.2713 2.8319 -6.5449 15 7 -1.2839 2.8549 -7.6034 16 6 -1.0298 2.6905 -8.9378 17 6 -2.1749 2.7656 -9.6344 18 6 -2.3255 2.6369 -11.1283 19 8 -2.8794 1.3577 -11.4428 20 14 -0.6561 2.8066 -11.9376 21 6 -3.2503 2.9976 -8.6671 22 6 -4.6325 3.1610 -8.7733 23 6 -5.3799 3.3670 -7.6478 24 6 -4.7754 3.4157 -6.3994 25 6 -3.4127 3.2569 -6.2716 26 6 -2.6335 3.0392 -7.4030 27 6 0.1606 -0.2702 -2.9825 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 3.0486 -0.6928 1.1992 32 1 1.5953 -0.1786 2.0894 33 1 1.5953 -1.7201 1.1995 34 1 1.5240 -1.6910 -1.2453 35 1 3.0449 -0.7707 -1.1557 36 1 2.9468 0.1042 -4.1646 37 1 2.3445 -1.5450 -3.6996 38 1 1.2552 1.8910 -4.6241 39 1 -0.5457 3.5406 -5.7636 40 1 0.6968 3.1082 -6.9625 41 1 -0.0528 2.5251 -9.3672 42 1 -2.9885 3.4202 -11.4956 43 1 -2.3408 0.6119 -11.1449 44 1 -0.7910 2.6821 -13.4112 45 1 -0.0554 4.1201 -11.5923 46 1 -5.1097 3.1238 -9.7413 47 1 -6.4492 3.4929 -7.7305 48 1 -5.3794 3.5796 -5.5192 49 1 -2.9518 3.2960 -5.2957 50 1 -0.1563 -1.2794 -2.7196 51 1 -0.6005 0.4816 -2.7731 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:34:44 Heat of formation + Delta-G solvation = 136.502951 kcal Electronic energy + Delta-G solvation = -30486.928189 eV Core-core repulsion = 26473.082271 eV Total energy + Delta-G solvation = -4013.845918 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.197 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.58553 -42.22818 -40.81275 -39.09880 -38.12865 -37.62468 -34.65431 -33.98368 -31.53754 -30.30341 -30.22025 -29.51256 -28.80697 -26.69150 -26.14305 -25.54347 -23.99233 -23.64987 -22.81625 -21.88084 -20.72956 -20.56483 -19.10815 -18.66008 -18.47491 -17.79789 -17.71030 -17.39023 -17.24623 -16.68665 -16.45629 -16.31632 -16.04295 -15.70010 -15.49078 -15.18979 -14.97362 -14.87004 -14.73984 -14.39886 -14.11184 -14.06039 -13.77398 -13.69395 -13.55600 -13.54480 -13.29728 -13.20190 -13.04446 -12.76925 -12.71839 -12.60657 -12.29514 -12.17066 -12.12862 -11.85454 -11.65791 -11.34392 -11.16795 -10.58608 -10.35115 -10.12916 -9.19254 -8.66011 -5.06808 0.10161 0.59125 1.04313 1.32030 1.38538 1.45183 1.64089 1.67067 1.98805 2.17404 2.88770 2.90511 2.97063 3.21895 3.37148 3.48092 3.54321 3.62814 3.65872 3.69742 3.77929 3.81925 3.85794 4.02455 4.04348 4.15150 4.17804 4.19479 4.21067 4.26066 4.34538 4.41213 4.43116 4.51797 4.53589 4.67444 4.72704 4.72998 4.74913 4.78577 4.80384 4.84537 4.86565 4.88644 4.96541 5.04835 5.09393 5.15925 5.45724 5.54678 5.61728 5.68029 5.70974 6.15210 6.22308 6.47447 6.78554 7.16883 Molecular weight = 345.20amu Principal moments of inertia in cm(-1) A = 0.015091 B = 0.002573 C = 0.002300 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1854.949127 B =10877.819610 C =12172.045551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.367 5.367 3 H 0.440 0.560 4 C -0.047 4.047 5 C 0.007 3.993 6 C -0.116 4.116 7 H 0.136 0.864 8 C -0.126 4.126 9 C 0.094 3.906 10 H 0.063 0.937 11 N -0.693 5.693 12 C 0.495 3.505 13 O -0.569 6.569 14 C 0.084 3.916 15 N -0.466 5.466 16 C 0.082 3.918 17 C -0.228 4.228 18 C -0.050 4.050 19 O -0.565 6.565 20 Si 0.799 3.201 21 C -0.122 4.122 22 C -0.096 4.096 23 C -0.157 4.157 24 C -0.108 4.108 25 C -0.126 4.126 26 C 0.094 3.906 27 C -0.153 4.153 28 H 0.118 0.882 29 H 0.116 0.884 30 H 0.127 0.873 31 H 0.128 0.872 32 H 0.124 0.876 33 H 0.115 0.885 34 H 0.132 0.868 35 H 0.150 0.850 36 H 0.089 0.911 37 H 0.106 0.894 38 H 0.422 0.578 39 H 0.146 0.854 40 H 0.162 0.838 41 H 0.209 0.791 42 H 0.087 0.913 43 H 0.391 0.609 44 H -0.309 1.309 45 H -0.273 1.273 46 H 0.107 0.893 47 H 0.129 0.871 48 H 0.148 0.852 49 H 0.145 0.855 50 H 0.103 0.897 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 20.700 -6.743 36.531 42.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 N 0.056 4.944 3 H 0.277 0.723 4 C -0.189 4.189 5 C -0.115 4.115 6 C -0.134 4.134 7 H 0.154 0.846 8 C -0.164 4.164 9 C -0.012 4.012 10 H 0.082 0.918 11 N -0.347 5.347 12 C 0.280 3.720 13 O -0.446 6.446 14 C -0.040 4.040 15 N -0.148 5.148 16 C -0.043 4.043 17 C -0.236 4.236 18 C -0.158 4.158 19 O -0.373 6.373 20 Si 0.704 3.296 21 C -0.126 4.126 22 C -0.115 4.115 23 C -0.176 4.176 24 C -0.127 4.127 25 C -0.146 4.146 26 C -0.011 4.011 27 C -0.192 4.192 28 H 0.136 0.864 29 H 0.135 0.865 30 H 0.145 0.855 31 H 0.146 0.854 32 H 0.143 0.857 33 H 0.134 0.866 34 H 0.150 0.850 35 H 0.167 0.833 36 H 0.107 0.893 37 H 0.124 0.876 38 H 0.261 0.739 39 H 0.164 0.836 40 H 0.180 0.820 41 H 0.226 0.774 42 H 0.104 0.896 43 H 0.240 0.760 44 H -0.237 1.237 45 H -0.199 1.199 46 H 0.125 0.875 47 H 0.147 0.853 48 H 0.166 0.834 49 H 0.163 0.837 50 H 0.121 0.879 51 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 20.384 -6.814 35.678 41.652 hybrid contribution -1.107 0.650 -0.531 1.389 sum 19.277 -6.164 35.147 40.558 Atomic orbital electron populations 1.24259 0.76864 1.09403 1.09423 1.44808 1.15421 1.19551 1.14610 0.72294 1.24120 1.05825 1.02237 0.86677 1.23932 1.06074 0.99364 0.82113 1.23010 0.95475 1.02227 0.92735 0.84613 1.23253 0.95506 1.03628 0.94062 1.21953 0.99489 0.84336 0.95400 0.91834 1.45398 1.40234 1.12665 1.36407 1.21324 0.79910 0.90795 0.79957 1.90849 1.43772 1.48538 1.61486 1.22060 0.94700 0.95238 0.92016 1.43419 1.04444 1.60982 1.05990 1.22041 0.99672 1.00609 0.82019 1.20786 0.92561 1.14891 0.95319 1.24695 1.10452 0.87477 0.93221 1.86464 1.53422 1.15369 1.82017 0.94158 0.75953 0.83079 0.76455 1.19388 0.93689 1.06011 0.93518 1.20432 0.92453 0.99640 0.98963 1.20911 1.00525 1.03380 0.92801 1.21144 0.94275 0.99496 0.97825 1.20235 0.93227 1.04882 0.96251 1.18362 0.84026 1.03461 0.95254 1.23777 0.97072 1.03819 0.94508 0.86410 0.86499 0.85506 0.85380 0.85747 0.86618 0.85033 0.83254 0.89253 0.87562 0.73929 0.83614 0.82042 0.77424 0.89560 0.76018 1.23719 1.19899 0.87483 0.85278 0.83406 0.83692 0.87889 0.90119 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.61 8.57 127.69 1.09 4.71 16 2 N -0.37 25.00 0.66 -948.86 -0.62 24.37 16 3 H 0.44 -31.90 8.41 -89.70 -0.75 -32.65 16 4 C -0.05 3.05 9.19 127.69 1.17 4.22 16 5 C 0.01 -0.45 4.57 86.30 0.39 -0.06 16 6 C -0.12 6.59 3.18 -10.27 -0.03 6.56 16 7 H 0.14 -8.31 8.10 -2.39 -0.02 -8.33 16 8 C -0.13 5.94 7.39 31.12 0.23 6.17 16 9 C 0.09 -3.60 4.32 45.52 0.20 -3.40 16 10 H 0.06 -1.75 7.46 -2.39 -0.02 -1.77 16 11 N -0.69 26.18 5.26 -440.03 -2.32 23.86 16 12 C 0.49 -13.30 7.90 87.66 0.69 -12.61 16 13 O -0.57 7.60 16.02 -3.02 -0.05 7.55 16 14 C 0.08 -2.49 6.48 85.63 0.56 -1.94 16 15 N -0.47 8.08 2.27 -519.98 -1.18 6.90 16 16 C 0.08 -1.30 9.89 83.00 0.82 -0.48 16 17 C -0.23 1.94 5.58 -18.63 -0.10 1.83 16 18 C -0.05 0.39 3.06 71.24 0.22 0.61 16 19 O -0.57 3.11 12.88 -148.98 -1.92 1.19 16 20 Si 0.80 -10.78 30.75 68.60 2.11 -8.67 16 21 C -0.12 0.53 6.35 -20.20 -0.13 0.40 16 22 C -0.10 0.27 10.05 22.23 0.22 0.49 16 23 C -0.16 1.05 9.97 22.03 0.22 1.27 16 24 C -0.11 1.23 10.01 22.29 0.22 1.45 16 25 C -0.13 1.69 10.00 22.37 0.22 1.92 16 26 C 0.09 -0.97 6.79 39.03 0.27 -0.70 16 27 C -0.15 7.26 5.69 31.12 0.18 7.43 16 28 H 0.12 -7.21 5.13 -2.39 -0.01 -7.22 16 29 H 0.12 -7.19 8.11 -2.39 -0.02 -7.21 16 30 H 0.13 -8.03 8.14 -2.39 -0.02 -8.05 16 31 H 0.13 -8.39 8.11 -2.39 -0.02 -8.41 16 32 H 0.12 -8.02 8.14 -2.39 -0.02 -8.04 16 33 H 0.12 -7.33 8.14 -2.39 -0.02 -7.34 16 34 H 0.13 -8.25 7.79 -2.39 -0.02 -8.27 16 35 H 0.15 -9.82 8.09 -2.39 -0.02 -9.84 16 36 H 0.09 -4.12 8.14 -2.39 -0.02 -4.14 16 37 H 0.11 -4.93 8.10 -2.39 -0.02 -4.95 16 38 H 0.42 -19.46 8.70 -92.71 -0.81 -20.27 16 39 H 0.15 -5.18 8.14 -2.39 -0.02 -5.20 16 40 H 0.16 -6.02 8.12 -2.39 -0.02 -6.04 16 41 H 0.21 -5.15 6.35 -2.91 -0.02 -5.17 16 42 H 0.09 -0.38 7.96 -2.39 -0.02 -0.40 16 43 H 0.39 -5.35 8.70 -74.06 -0.64 -6.00 16 44 H -0.31 1.30 7.11 99.48 0.71 2.00 16 45 H -0.27 2.92 7.11 99.48 0.71 3.63 16 46 H 0.11 -0.18 8.06 -2.92 -0.02 -0.20 16 47 H 0.13 -1.22 8.06 -2.91 -0.02 -1.24 16 48 H 0.15 -2.51 8.06 -2.91 -0.02 -2.54 16 49 H 0.15 -3.11 8.06 -2.91 -0.02 -3.14 16 50 H 0.10 -4.85 7.90 -2.39 -0.02 -4.87 16 51 H 0.08 -3.70 7.18 -2.39 -0.02 -3.72 16 Total: 1.00 -97.55 408.19 1.24 -96.30 By element: Atomic # 1 Polarization: -168.15 SS G_CDS: -1.22 Total: -169.37 kcal Atomic # 6 Polarization: 11.43 SS G_CDS: 6.44 Total: 17.87 kcal Atomic # 7 Polarization: 59.25 SS G_CDS: -4.12 Total: 55.13 kcal Atomic # 8 Polarization: 10.70 SS G_CDS: -1.97 Total: 8.73 kcal Atomic # 14 Polarization: -10.78 SS G_CDS: 2.11 Total: -8.67 kcal Total: -97.55 1.24 -96.30 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 232.807 kcal (2) G-P(sol) polarization free energy of solvation -97.549 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -96.304 kcal (6) G-S(sol) free energy of system = (1) + (5) 136.503 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds