Wall clock time and date at job start Sun Mar 7 2021 08:23:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.42902 * 109.47005 * 2 1 4 4 C 1.35893 * 117.00354 * 276.36948 * 3 2 1 5 5 C 1.38735 * 120.05783 * 1.09694 * 4 3 2 6 6 C 1.38143 * 119.94646 * 179.74470 * 5 4 3 7 7 C 1.38273 * 120.05211 * 0.49790 * 6 5 4 8 8 C 1.50699 * 119.94227 * 179.74568 * 7 6 5 9 9 O 1.42901 * 109.47317 * 245.02677 * 8 7 6 10 10 Si 1.86303 * 109.47016 * 5.02730 * 8 7 6 11 11 H 1.48502 * 109.47066 * 60.00012 * 10 8 7 12 12 H 1.48502 * 109.46894 * 179.97438 * 10 8 7 13 13 H 1.48501 * 109.47321 * 299.99639 * 10 8 7 14 14 C 1.38259 * 120.11451 * 359.77939 * 7 6 5 15 15 C 1.38146 * 120.05559 * 359.96748 * 14 7 6 16 16 C 1.50696 * 109.47203 * 120.00784 * 2 1 3 17 17 O 1.21285 * 119.99488 * 244.99847 * 16 2 1 18 18 N 1.34772 * 120.00352 * 64.99638 * 16 2 1 19 19 N 1.36598 * 120.00200 * 185.12635 * 18 16 2 20 20 C 1.46352 * 111.00185 * 110.72294 * 19 18 16 21 21 C 1.52619 * 111.89115 * 203.19310 * 20 19 18 22 22 C 1.53924 * 109.31540 * 283.48000 * 21 20 19 23 23 Si 1.87525 * 106.84980 * 57.20665 * 22 21 20 24 24 C 1.86295 * 110.00503 * 196.90331 * 23 22 21 25 25 C 1.86299 * 110.00316 * 75.49987 * 23 22 21 26 26 C 1.47728 * 110.99843 * 235.07708 * 19 18 16 27 27 H 1.09004 * 109.47330 * 59.99075 * 1 2 3 28 28 H 1.08995 * 109.47021 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.46481 * 299.99824 * 1 2 3 30 30 H 1.09005 * 109.46485 * 240.00732 * 2 1 3 31 31 H 1.07996 * 120.02539 * 359.97438 * 5 4 3 32 32 H 1.07993 * 119.97289 * 180.22688 * 6 5 4 33 33 H 1.08997 * 109.47321 * 125.02473 * 8 7 6 34 34 H 0.96703 * 114.00181 * 60.00258 * 9 8 7 35 35 H 1.07998 * 119.97691 * 179.97438 * 14 7 6 36 36 H 1.08006 * 120.03122 * 179.97438 * 15 14 7 37 37 H 0.96998 * 119.99942 * 5.12689 * 18 16 2 38 38 H 1.08991 * 109.00073 * 323.82206 * 20 19 18 39 39 H 1.09003 * 108.99423 * 82.57980 * 20 19 18 40 40 H 1.09005 * 109.49588 * 163.52948 * 21 20 19 41 41 H 1.09000 * 109.52656 * 43.45257 * 21 20 19 42 42 H 1.09004 * 109.98104 * 297.86952 * 22 21 20 43 43 H 1.09004 * 110.05543 * 176.57896 * 22 21 20 44 44 H 1.08994 * 109.47452 * 177.27252 * 24 23 22 45 45 H 1.09001 * 109.47063 * 297.27004 * 24 23 22 46 46 H 1.08998 * 109.47125 * 57.26502 * 24 23 22 47 47 H 1.09004 * 109.47035 * 302.73253 * 25 23 22 48 48 H 1.09007 * 109.47137 * 62.72814 * 25 23 22 49 49 H 1.08996 * 109.47287 * 182.73178 * 25 23 22 50 50 H 1.08990 * 109.94494 * 294.88537 * 26 19 18 51 51 H 1.08999 * 109.94563 * 56.05283 * 26 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.0854 1.9738 -1.2033 5 6 1.6907 1.3134 -2.3578 6 6 1.7670 1.9544 -3.5792 7 6 2.2460 3.2494 -3.6529 8 6 2.3336 3.9441 -4.9873 9 8 3.7039 4.1996 -5.3024 10 14 1.5859 2.8579 -6.3032 11 1 0.1619 2.5925 -5.9758 12 1 1.6716 3.5428 -7.6181 13 1 2.3275 1.5728 -6.3647 14 6 2.6454 3.9077 -2.5045 15 6 2.5661 3.2730 -1.2801 16 6 2.0324 -0.7106 1.2303 17 8 2.6531 -0.0981 2.0733 18 7 1.7920 -2.0265 1.3939 19 7 2.1547 -2.6479 2.5550 20 6 0.9770 -3.0333 3.3338 21 6 1.3024 -3.1929 4.8163 22 6 2.0383 -4.5269 5.0354 23 14 3.5637 -4.4916 3.9451 24 6 4.2397 -6.2153 3.7389 25 6 4.8586 -3.3829 4.6966 26 6 3.0232 -3.8117 2.2836 27 1 -0.3634 0.5140 -0.8899 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3632 0.5138 0.8901 30 1 1.8933 -0.5138 -0.8901 31 1 1.3206 0.3004 -2.3012 32 1 1.4565 1.4420 -4.4777 33 1 1.7893 4.8874 -4.9423 34 1 4.2495 3.4032 -5.3590 35 1 3.0195 4.9190 -2.5647 36 1 2.8786 3.7875 -0.3833 37 1 1.3613 -2.5324 0.6872 38 1 0.2098 -2.2677 3.2192 39 1 0.5926 -3.9789 2.9512 40 1 0.3781 -3.1881 5.3942 41 1 1.9383 -2.3690 5.1405 42 1 1.3949 -5.3587 4.7487 43 1 2.3302 -4.6255 6.0810 44 1 5.0963 -6.1915 3.0655 45 1 4.5511 -6.6020 4.7093 46 1 3.4671 -6.8610 3.3214 47 1 4.4455 -2.3838 4.8353 48 1 5.1664 -3.7859 5.6616 49 1 5.7216 -3.3303 4.0329 50 1 2.4666 -4.5709 1.7344 51 1 3.8939 -3.4994 1.7071 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:23:31 Heat of formation + Delta-G solvation = -78.761392 kcal Electronic energy + Delta-G solvation = -29225.497686 eV Core-core repulsion = 25250.037461 eV Total energy + Delta-G solvation = -3975.460225 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 352.178 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.76833 -40.76914 -39.35411 -38.22641 -37.11209 -35.04419 -33.61515 -32.06518 -31.67753 -30.98118 -29.45343 -28.44458 -27.67322 -26.76104 -25.85620 -24.67388 -23.85116 -22.43657 -21.89909 -21.39960 -19.58051 -19.00817 -18.15787 -17.92202 -16.99528 -16.98759 -16.56586 -16.49083 -16.08235 -15.69695 -15.50774 -15.32886 -15.05968 -14.88861 -14.65597 -14.55013 -14.46210 -14.18496 -14.13360 -13.88779 -13.71686 -13.63746 -13.52245 -13.44951 -13.30592 -13.18963 -13.03556 -12.91762 -12.30545 -12.23206 -12.13688 -12.08385 -12.06383 -11.99977 -11.55994 -11.29016 -10.92038 -10.66862 -10.45473 -10.39475 -10.27895 -10.03171 -9.72822 -9.19173 0.29585 0.30227 1.10796 1.14126 1.39552 1.48352 1.54238 1.65856 1.74919 1.85108 1.88888 2.35530 2.49424 2.66608 3.22118 3.43234 3.48588 3.55468 3.65539 3.70564 3.83156 3.87818 3.90020 4.06343 4.20332 4.27247 4.28338 4.41116 4.44317 4.50051 4.55717 4.56162 4.60500 4.61874 4.65417 4.68071 4.74176 4.83588 4.87613 4.89619 4.95443 4.98068 5.17236 5.20240 5.25994 5.32841 5.38292 5.51193 5.65921 5.68795 5.70402 6.18649 6.22835 6.40992 6.55789 7.46131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.070 3.930 3 O -0.282 6.282 4 C 0.137 3.863 5 C -0.209 4.209 6 C -0.084 4.084 7 C -0.158 4.158 8 C -0.075 4.075 9 O -0.539 6.539 10 Si 0.948 3.052 11 H -0.251 1.251 12 H -0.254 1.254 13 H -0.253 1.253 14 C -0.047 4.047 15 C -0.146 4.146 16 C 0.533 3.467 17 O -0.485 6.485 18 N -0.584 5.584 19 N -0.274 5.274 20 C 0.025 3.975 21 C -0.101 4.101 22 C -0.410 4.410 23 Si 1.034 2.966 24 C -0.450 4.450 25 C -0.444 4.444 26 C -0.260 4.260 27 H 0.079 0.921 28 H 0.078 0.922 29 H 0.078 0.922 30 H 0.099 0.901 31 H 0.132 0.868 32 H 0.123 0.877 33 H 0.117 0.883 34 H 0.376 0.624 35 H 0.136 0.864 36 H 0.137 0.863 37 H 0.378 0.622 38 H 0.079 0.921 39 H 0.045 0.955 40 H 0.073 0.927 41 H 0.080 0.920 42 H 0.074 0.926 43 H 0.081 0.919 44 H 0.070 0.930 45 H 0.074 0.926 46 H 0.069 0.931 47 H 0.078 0.922 48 H 0.068 0.932 49 H 0.067 0.933 50 H 0.055 0.945 51 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.860 -5.437 -1.769 6.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.008 3.992 3 O -0.194 6.194 4 C 0.092 3.908 5 C -0.227 4.227 6 C -0.102 4.102 7 C -0.159 4.159 8 C -0.186 4.186 9 O -0.344 6.344 10 Si 0.772 3.228 11 H -0.175 1.175 12 H -0.178 1.178 13 H -0.177 1.177 14 C -0.065 4.065 15 C -0.164 4.164 16 C 0.316 3.684 17 O -0.354 6.354 18 N -0.330 5.330 19 N -0.090 5.090 20 C -0.103 4.103 21 C -0.140 4.140 22 C -0.497 4.497 23 Si 1.227 2.773 24 C -0.559 4.559 25 C -0.553 4.553 26 C -0.433 4.433 27 H 0.098 0.902 28 H 0.096 0.904 29 H 0.097 0.903 30 H 0.117 0.883 31 H 0.149 0.851 32 H 0.140 0.860 33 H 0.135 0.865 34 H 0.223 0.777 35 H 0.154 0.846 36 H 0.154 0.846 37 H 0.216 0.784 38 H 0.098 0.902 39 H 0.063 0.937 40 H 0.092 0.908 41 H 0.098 0.902 42 H 0.093 0.907 43 H 0.100 0.900 44 H 0.090 0.910 45 H 0.093 0.907 46 H 0.088 0.912 47 H 0.097 0.903 48 H 0.087 0.913 49 H 0.087 0.913 50 H 0.073 0.927 51 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -2.704 -4.421 -1.374 5.361 hybrid contribution -0.533 -1.475 -0.693 1.715 sum -3.238 -5.896 -2.067 7.037 Atomic orbital electron populations 1.22348 0.92265 1.03843 1.04967 1.22124 0.95856 0.83343 0.97864 1.86232 1.80639 1.25203 1.27303 1.19083 0.95270 0.92586 0.83910 1.21164 1.08024 1.01204 0.92353 1.20819 0.97905 0.94161 0.97274 1.20209 1.04223 0.95046 0.96427 1.24895 0.88363 1.07059 0.98296 1.86521 1.18913 1.36238 1.92740 0.85713 0.80248 0.78430 0.78442 1.17483 1.17808 1.17704 1.20861 0.95540 0.99803 0.90325 1.20556 1.03938 0.92774 0.99171 1.19871 0.80085 0.80990 0.87417 1.90761 1.36602 1.65019 1.43045 1.45414 1.63770 1.08775 1.15040 1.62968 1.15363 1.26301 1.04384 1.22611 0.92225 1.00321 0.95123 1.21187 1.01486 0.97854 0.93428 1.26383 1.13831 0.99326 1.10113 0.79184 0.67695 0.65979 0.64492 1.26119 1.06716 1.17934 1.05085 1.26037 1.11726 1.10825 1.06672 1.28077 1.00757 0.95338 1.19091 0.90238 0.90355 0.90319 0.88329 0.85073 0.85965 0.86501 0.77692 0.84585 0.84559 0.78358 0.90222 0.93696 0.90810 0.90180 0.90697 0.90027 0.91044 0.90653 0.91216 0.90322 0.91310 0.91340 0.92689 0.88934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.36 9.15 37.16 0.34 0.70 16 2 C 0.07 0.01 2.65 -27.88 -0.07 -0.07 16 3 O -0.28 -0.91 9.34 -39.26 -0.37 -1.28 16 4 C 0.14 0.28 6.58 -39.21 -0.26 0.02 16 5 C -0.21 -0.05 8.25 -39.43 -0.33 -0.38 16 6 C -0.08 -0.01 8.66 -39.60 -0.34 -0.35 16 7 C -0.16 -0.07 5.35 -104.60 -0.56 -0.63 16 8 C -0.08 0.04 2.80 36.01 0.10 0.14 16 9 O -0.54 -0.19 12.83 -35.23 -0.45 -0.64 16 10 Si 0.95 -0.77 25.13 -169.99 -4.27 -5.04 16 11 H -0.25 0.08 7.11 56.52 0.40 0.48 16 12 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 13 H -0.25 0.20 7.04 56.52 0.40 0.59 16 14 C -0.05 -0.04 9.68 -39.61 -0.38 -0.43 16 15 C -0.15 -0.27 9.99 -39.43 -0.39 -0.67 16 16 C 0.53 1.36 7.28 -10.99 -0.08 1.28 16 17 O -0.48 -3.68 16.84 -14.31 -0.24 -3.92 16 18 N -0.58 0.07 4.67 31.22 0.15 0.22 16 19 N -0.27 -0.15 4.15 -56.98 -0.24 -0.39 16 20 C 0.02 -0.02 5.38 -4.32 -0.02 -0.04 16 21 C -0.10 0.09 5.74 -26.44 -0.15 -0.07 16 22 C -0.41 0.83 5.04 37.64 0.19 1.02 16 23 Si 1.03 -2.61 11.99 -169.99 -2.04 -4.65 16 24 C -0.45 1.03 8.65 101.05 0.87 1.91 16 25 C -0.44 0.12 8.65 101.05 0.87 0.99 16 26 C -0.26 0.33 4.85 60.52 0.29 0.63 16 27 H 0.08 -0.19 7.07 -51.93 -0.37 -0.56 16 28 H 0.08 -0.34 8.10 -51.93 -0.42 -0.76 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.10 -0.23 6.17 -51.93 -0.32 -0.55 16 31 H 0.13 -0.28 5.54 -52.49 -0.29 -0.57 16 32 H 0.12 -0.17 4.86 -52.49 -0.25 -0.42 16 33 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 34 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 35 H 0.14 -0.03 8.06 -52.49 -0.42 -0.45 16 36 H 0.14 0.19 8.06 -52.48 -0.42 -0.23 16 37 H 0.38 -1.23 8.79 -185.16 -1.63 -2.86 16 38 H 0.08 -0.03 8.03 -51.93 -0.42 -0.45 16 39 H 0.04 -0.09 7.78 -51.93 -0.40 -0.50 16 40 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.08 0.03 7.96 -51.93 -0.41 -0.39 16 42 H 0.07 -0.19 7.99 -51.93 -0.42 -0.60 16 43 H 0.08 -0.17 7.99 -51.93 -0.42 -0.59 16 44 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 45 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 46 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 47 H 0.08 0.11 7.96 -51.93 -0.41 -0.31 16 48 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 49 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 50 H 0.05 -0.14 7.92 -51.93 -0.41 -0.56 16 51 H 0.09 -0.06 7.99 -51.93 -0.42 -0.47 16 LS Contribution 407.94 15.07 6.15 6.15 Total: 0.00 -8.89 407.94 -10.39 -19.29 By element: Atomic # 1 Polarization: -4.65 SS G_CDS: -9.16 Total: -13.81 kcal Atomic # 6 Polarization: 3.99 SS G_CDS: 0.08 Total: 4.07 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.09 Total: -0.17 kcal Atomic # 8 Polarization: -4.78 SS G_CDS: -1.06 Total: -5.84 kcal Atomic # 14 Polarization: -3.38 SS G_CDS: -6.31 Total: -9.69 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -8.89 -10.39 -19.29 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.475 kcal (2) G-P(sol) polarization free energy of solvation -8.892 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.287 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds