Wall clock time and date at job start Sun Mar 7 2021 08:27:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.35531 * 125.68050 * 2 1 4 4 C 1.35447 * 108.87588 * 179.82703 * 3 2 1 5 5 C 1.50703 * 126.07343 * 180.16431 * 4 3 2 6 6 O 1.42901 * 109.47010 * 300.29065 * 5 4 3 7 7 Si 1.86293 * 109.47395 * 180.29033 * 5 4 3 8 8 H 1.48496 * 109.47616 * 59.99795 * 7 5 4 9 9 H 1.48499 * 109.47014 * 180.02562 * 7 5 4 10 10 H 1.48511 * 109.46957 * 300.00071 * 7 5 4 11 11 C 1.39844 * 107.86355 * 0.43500 * 4 3 2 12 12 C 1.37654 * 125.67988 * 180.30884 * 2 1 3 13 13 C 1.46677 * 126.22740 * 359.97438 * 12 2 1 14 14 O 1.21697 * 119.99978 * 172.96627 * 13 12 2 15 15 N 1.34776 * 120.00340 * 352.96683 * 13 12 2 16 16 N 1.36608 * 119.99974 * 185.37919 * 15 13 12 17 17 C 1.46351 * 110.99844 * 238.75247 * 16 15 13 18 18 C 1.52627 * 111.89190 * 156.80144 * 17 16 15 19 19 C 1.53933 * 109.30759 * 76.52160 * 18 17 16 20 20 Si 1.87515 * 106.85202 * 302.79738 * 19 18 17 21 21 C 1.86293 * 110.00536 * 163.10072 * 20 19 18 22 22 C 1.86304 * 110.00201 * 284.40179 * 20 19 18 23 23 C 1.47725 * 111.00094 * 114.40100 * 16 15 13 24 24 H 1.08999 * 109.47215 * 257.33692 * 1 2 3 25 25 H 1.09003 * 109.46724 * 137.33383 * 1 2 3 26 26 H 1.09004 * 109.47030 * 17.33744 * 1 2 3 27 27 H 1.07998 * 125.56147 * 359.97438 * 3 2 1 28 28 H 1.09000 * 109.46573 * 60.28679 * 5 4 3 29 29 H 0.96697 * 114.00169 * 299.99931 * 6 5 4 30 30 H 1.07995 * 126.45882 * 179.71634 * 11 4 3 31 31 H 0.96999 * 120.00397 * 5.37172 * 15 13 12 32 32 H 1.09001 * 108.99814 * 277.42493 * 17 16 15 33 33 H 1.09004 * 109.00181 * 36.26307 * 17 16 15 34 34 H 1.08995 * 109.49956 * 196.47276 * 18 17 16 35 35 H 1.08995 * 109.49867 * 316.57660 * 18 17 16 36 36 H 1.09005 * 109.97586 * 62.13204 * 19 18 17 37 37 H 1.09000 * 109.97356 * 183.36867 * 19 18 17 38 38 H 1.08994 * 109.47441 * 59.99567 * 21 20 19 39 39 H 1.09000 * 109.47346 * 179.97438 * 21 20 19 40 40 H 1.09004 * 109.47224 * 299.99952 * 21 20 19 41 41 H 1.09006 * 109.46659 * 60.00224 * 22 20 19 42 42 H 1.09003 * 109.47103 * 179.97438 * 22 20 19 43 43 H 1.08999 * 109.47318 * 300.00032 * 22 20 19 44 44 H 1.08995 * 109.94829 * 303.86081 * 23 16 15 45 45 H 1.09002 * 109.94285 * 65.11630 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7093 0.0039 5 6 4.7538 1.6188 0.0087 6 8 4.7273 2.4493 -1.1539 7 14 6.3090 0.5932 0.0039 8 1 6.3372 -0.2576 -1.2128 9 1 7.4930 1.4895 0.0093 10 1 6.3365 -0.2698 1.2122 11 6 3.5780 -0.6889 -0.0037 12 6 2.2679 -1.1181 -0.0060 13 6 1.8124 -2.5124 -0.0130 14 8 2.6176 -3.4149 -0.1470 15 7 0.5020 -2.7940 0.1289 16 7 0.0898 -4.0922 0.2328 17 6 -0.8543 -4.4296 -0.8334 18 6 -0.8956 -5.9313 -1.1027 19 6 -1.7072 -6.6251 0.0061 20 14 -0.8854 -6.1900 1.6345 21 6 -2.0481 -6.5373 3.0480 22 6 0.6811 -7.1770 1.8414 23 6 -0.4882 -4.3591 1.5658 24 1 -0.3633 -0.2253 1.0026 25 1 -0.3633 -0.7557 -0.6965 26 1 -0.3633 0.9810 -0.3063 27 1 1.9082 2.1235 -0.0004 28 1 4.7330 2.2433 0.9018 29 1 4.7435 1.9595 -1.9875 30 1 4.4583 -1.3144 -0.0074 31 1 -0.1483 -2.0749 0.1574 32 1 -1.8502 -4.0932 -0.5451 33 1 -0.5568 -3.9146 -1.7469 34 1 -1.3674 -6.1150 -2.0680 35 1 0.1198 -6.3273 -1.1123 36 1 -2.7347 -6.2613 -0.0013 37 1 -1.6937 -7.7048 -0.1427 38 1 -2.3113 -7.5950 3.0505 39 1 -1.5619 -6.2820 3.9896 40 1 -2.9514 -5.9385 2.9310 41 1 1.3643 -6.9500 1.0230 42 1 1.1516 -6.9173 2.7897 43 1 0.4441 -8.2409 1.8324 44 1 0.2340 -4.1058 2.3418 45 1 -1.3993 -3.7757 1.6996 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_10803934.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:27:33 Heat of formation + Delta-G solvation = -13.653080 kcal Electronic energy + Delta-G solvation = -24453.491688 eV Core-core repulsion = 21017.874812 eV Total energy + Delta-G solvation = -3435.616876 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 311.158 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.61800 -40.57245 -38.32922 -37.69967 -35.21674 -34.09009 -31.93125 -30.34250 -29.45161 -28.68177 -28.43550 -27.67010 -26.00799 -25.03595 -23.15720 -22.00931 -21.19233 -20.84041 -19.03720 -18.33223 -17.41142 -17.04268 -16.84761 -16.53074 -15.79302 -15.67489 -15.42875 -15.19937 -15.00097 -14.89775 -14.65794 -14.46648 -14.17890 -14.12468 -13.87808 -13.77169 -13.62085 -13.44124 -13.29208 -13.25962 -13.18080 -13.03282 -12.19844 -12.14766 -12.08714 -11.94970 -11.66676 -11.39619 -10.90784 -10.80987 -10.45869 -10.33835 -10.19424 -9.78796 -9.74925 -9.21996 0.46245 1.31337 1.32751 1.54933 1.57556 1.67536 1.69424 1.75969 1.76805 2.02025 2.11591 2.44132 2.49899 3.28680 3.36322 3.56802 3.64809 3.77833 3.87320 3.96133 4.02436 4.09333 4.16111 4.28927 4.41327 4.44277 4.54366 4.60119 4.61917 4.65219 4.74151 4.74892 4.84464 4.87663 4.90898 4.97164 5.07654 5.19327 5.32270 5.38233 5.65268 5.66885 5.71417 5.83991 6.05144 6.23196 6.42133 6.69400 7.50676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.432 5.432 3 C 0.058 3.942 4 C -0.214 4.214 5 C -0.043 4.043 6 O -0.545 6.545 7 Si 0.950 3.050 8 H -0.251 1.251 9 H -0.257 1.257 10 H -0.251 1.251 11 C -0.104 4.104 12 C -0.050 4.050 13 C 0.604 3.396 14 O -0.499 6.499 15 N -0.595 5.595 16 N -0.276 5.276 17 C 0.026 3.974 18 C -0.100 4.100 19 C -0.410 4.410 20 Si 1.033 2.967 21 C -0.450 4.450 22 C -0.444 4.444 23 C -0.261 4.261 24 H 0.083 0.917 25 H 0.083 0.917 26 H 0.103 0.897 27 H 0.175 0.825 28 H 0.113 0.887 29 H 0.376 0.624 30 H 0.150 0.850 31 H 0.372 0.628 32 H 0.044 0.956 33 H 0.079 0.921 34 H 0.074 0.926 35 H 0.080 0.920 36 H 0.074 0.926 37 H 0.081 0.919 38 H 0.074 0.926 39 H 0.070 0.930 40 H 0.068 0.932 41 H 0.078 0.922 42 H 0.067 0.933 43 H 0.068 0.932 44 H 0.091 0.909 45 H 0.051 0.949 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.193 1.515 0.583 6.403 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.108 5.108 3 C -0.077 4.077 4 C -0.221 4.221 5 C -0.155 4.155 6 O -0.350 6.350 7 Si 0.772 3.228 8 H -0.175 1.175 9 H -0.181 1.181 10 H -0.174 1.174 11 C -0.131 4.131 12 C -0.162 4.162 13 C 0.391 3.609 14 O -0.371 6.371 15 N -0.344 5.344 16 N -0.091 5.091 17 C -0.102 4.102 18 C -0.139 4.139 19 C -0.496 4.496 20 Si 1.225 2.775 21 C -0.558 4.558 22 C -0.552 4.552 23 C -0.434 4.434 24 H 0.101 0.899 25 H 0.102 0.898 26 H 0.121 0.879 27 H 0.192 0.808 28 H 0.131 0.869 29 H 0.223 0.777 30 H 0.168 0.832 31 H 0.215 0.785 32 H 0.062 0.938 33 H 0.098 0.902 34 H 0.092 0.908 35 H 0.099 0.901 36 H 0.093 0.907 37 H 0.100 0.900 38 H 0.094 0.906 39 H 0.090 0.910 40 H 0.087 0.913 41 H 0.097 0.903 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.109 0.891 45 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -4.840 0.540 0.883 4.949 hybrid contribution -1.767 0.818 -0.187 1.956 sum -6.607 1.358 0.695 6.781 Atomic orbital electron populations 1.22338 0.77150 1.05544 1.03561 1.44045 1.06141 1.05876 1.54786 1.21864 0.89749 0.91447 1.04678 1.19833 0.94853 0.93668 1.13703 1.24243 1.02392 0.97541 0.91328 1.86471 1.97159 1.35757 1.15585 0.85689 0.76427 0.78499 0.82154 1.17452 1.18090 1.17440 1.21194 0.95005 0.94095 1.02780 1.20325 0.90857 0.85860 1.19203 1.16851 0.81238 0.86288 0.76493 1.90850 1.53028 1.45904 1.47294 1.46053 1.07784 1.03442 1.77082 1.62895 1.40036 1.03845 1.02366 1.22572 0.94024 0.98718 0.94865 1.21187 1.01602 0.92284 0.98828 1.26384 1.04950 1.04366 1.13906 0.79199 0.67272 0.64077 0.66927 1.26118 1.10515 1.05409 1.13792 1.26029 1.15706 1.08275 1.05207 1.28112 1.01604 1.21315 0.92366 0.89872 0.89835 0.87881 0.80809 0.86902 0.77709 0.83228 0.78450 0.93773 0.90216 0.90773 0.90095 0.90716 0.89990 0.90646 0.91035 0.91265 0.90258 0.91341 0.91301 0.89054 0.93007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.24 9.42 59.85 0.56 0.33 16 2 N -0.43 0.19 3.16 -120.24 -0.38 -0.19 16 3 C 0.06 -0.02 11.26 -16.91 -0.19 -0.21 16 4 C -0.21 -0.21 5.41 -105.02 -0.57 -0.78 16 5 C -0.04 -0.01 3.00 36.01 0.11 0.10 16 6 O -0.54 -0.29 12.87 -35.23 -0.45 -0.74 16 7 Si 0.95 0.78 25.92 -169.99 -4.41 -3.62 16 8 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 9 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 10 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 11 C -0.10 -0.29 9.14 -39.12 -0.36 -0.65 16 12 C -0.05 -0.13 6.88 -81.98 -0.56 -0.69 16 13 C 0.60 2.50 7.87 -12.85 -0.10 2.39 16 14 O -0.50 -4.01 17.22 5.19 0.09 -3.92 16 15 N -0.59 -0.72 4.60 30.26 0.14 -0.58 16 16 N -0.28 -0.33 4.15 -56.97 -0.24 -0.57 16 17 C 0.03 -0.01 5.38 -4.31 -0.02 -0.04 16 18 C -0.10 0.08 5.74 -26.44 -0.15 -0.07 16 19 C -0.41 0.80 5.03 37.64 0.19 0.99 16 20 Si 1.03 -2.33 11.99 -169.99 -2.04 -4.37 16 21 C -0.45 0.94 8.65 101.05 0.87 1.81 16 22 C -0.44 0.03 8.65 101.05 0.87 0.91 16 23 C -0.26 0.16 4.86 60.52 0.29 0.46 16 24 H 0.08 -0.43 7.95 -51.93 -0.41 -0.85 16 25 H 0.08 -0.40 6.39 -51.93 -0.33 -0.73 16 26 H 0.10 -0.64 8.09 -51.93 -0.42 -1.06 16 27 H 0.17 -0.48 8.06 -52.49 -0.42 -0.90 16 28 H 0.11 -0.10 7.96 -51.93 -0.41 -0.51 16 29 H 0.38 -0.85 8.70 45.56 0.40 -0.45 16 30 H 0.15 0.46 6.38 -52.49 -0.33 0.12 16 31 H 0.37 -0.61 4.50 -185.15 -0.83 -1.44 16 32 H 0.04 -0.09 7.78 -51.93 -0.40 -0.49 16 33 H 0.08 -0.01 8.03 -51.93 -0.42 -0.43 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.08 0.03 7.96 -51.93 -0.41 -0.39 16 36 H 0.07 -0.18 7.99 -51.93 -0.42 -0.60 16 37 H 0.08 -0.17 8.00 -51.93 -0.42 -0.59 16 38 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 40 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 41 H 0.08 0.12 7.96 -51.93 -0.41 -0.29 16 42 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 43 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 44 H 0.09 0.03 7.99 -51.93 -0.41 -0.39 16 45 H 0.05 -0.10 7.92 -51.93 -0.41 -0.52 16 LS Contribution 362.16 15.07 5.46 5.46 Total: 0.00 -8.51 362.16 -8.24 -16.75 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -7.36 Total: -12.76 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 0.95 Total: 4.54 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: -0.48 Total: -1.34 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -0.36 Total: -4.66 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -6.44 Total: -7.99 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -8.51 -8.24 -16.75 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_10803934.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.099 kcal (2) G-P(sol) polarization free energy of solvation -8.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds