Wall clock time and date at job start Sun Mar 7 2021 08:30:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37649 * 125.67657 * 2 1 4 4 C 1.46677 * 126.23788 * 0.02599 * 3 2 1 5 5 O 1.21690 * 120.00269 * 172.95186 * 4 3 2 6 6 N 1.34783 * 119.99525 * 352.94656 * 4 3 2 7 7 N 1.36600 * 119.99578 * 186.65640 * 6 4 3 8 8 C 1.46361 * 110.99616 * 246.25404 * 7 6 4 9 9 C 1.52624 * 111.88891 * 203.19678 * 8 7 6 10 10 C 1.53935 * 109.31265 * 283.48149 * 9 8 7 11 11 Si 1.87518 * 106.84929 * 57.20431 * 10 9 8 12 12 C 1.86303 * 110.00596 * 75.50403 * 11 10 9 13 13 C 1.86298 * 110.00296 * 196.80616 * 11 10 9 14 14 C 1.47721 * 111.00233 * 10.60435 * 7 6 4 15 15 C 1.37873 * 107.53001 * 180.28301 * 3 2 1 16 16 C 1.39836 * 107.08553 * 359.58945 * 15 3 2 17 17 C 1.35455 * 107.86590 * 0.41187 * 16 15 3 18 18 C 1.50698 * 125.56558 * 179.76095 * 17 16 15 19 19 O 1.42894 * 109.47173 * 209.97939 * 18 17 16 20 20 Si 1.86299 * 109.47023 * 329.98164 * 18 17 16 21 21 H 1.48502 * 109.47188 * 299.99271 * 20 18 17 22 22 H 1.48495 * 109.47554 * 60.00094 * 20 18 17 23 23 H 1.48504 * 109.46802 * 179.97438 * 20 18 17 24 24 H 1.09000 * 109.47438 * 77.28183 * 1 2 3 25 25 H 1.08997 * 109.47153 * 197.28932 * 1 2 3 26 26 H 1.09007 * 109.47101 * 317.28466 * 1 2 3 27 27 H 0.97001 * 119.99911 * 6.65725 * 6 4 3 28 28 H 1.08995 * 108.99440 * 82.58174 * 8 7 6 29 29 H 1.08994 * 108.93618 * 323.77188 * 8 7 6 30 30 H 1.08996 * 109.50149 * 163.52937 * 9 8 7 31 31 H 1.09006 * 109.52251 * 43.44511 * 9 8 7 32 32 H 1.08996 * 109.97776 * 297.86948 * 10 9 8 33 33 H 1.08998 * 110.05153 * 176.57800 * 10 9 8 34 34 H 1.08993 * 109.47020 * 59.99521 * 12 11 10 35 35 H 1.09007 * 109.46679 * 300.00289 * 12 11 10 36 36 H 1.08992 * 109.47494 * 180.02562 * 12 11 10 37 37 H 1.08995 * 109.47225 * 298.68689 * 13 11 10 38 38 H 1.09005 * 109.47467 * 58.68542 * 13 11 10 39 39 H 1.09001 * 109.47139 * 178.68385 * 13 11 10 40 40 H 1.08999 * 109.94568 * 56.14110 * 14 7 6 41 41 H 1.08999 * 109.94885 * 294.88910 * 14 7 6 42 42 H 1.08007 * 126.45546 * 179.73677 * 15 3 2 43 43 H 1.08000 * 126.06385 * 180.16088 * 16 15 3 44 44 H 1.09004 * 109.46764 * 89.97488 * 18 17 16 45 45 H 0.96704 * 114.00162 * 180.02562 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8125 2.5125 0.0005 5 8 2.6178 3.4155 0.1298 6 7 0.5020 2.7934 -0.1422 7 7 0.0923 4.0894 -0.2783 8 6 -0.7026 4.5120 0.8756 9 6 -1.6227 5.6812 0.5353 10 6 -0.7958 6.9781 0.4721 11 14 0.5502 6.7028 -0.8042 12 6 -0.1692 6.7994 -2.5200 13 6 1.8903 7.9811 -0.6029 14 6 1.2439 4.9887 -0.4952 15 6 3.5780 0.6888 -0.0065 16 6 3.5521 -0.7093 -0.0008 17 6 2.2554 -1.1010 -0.0005 18 6 1.7708 -2.5279 -0.0002 19 8 0.5125 -2.6037 -0.6731 20 14 3.0109 -3.6051 -0.8792 21 1 3.1692 -3.1364 -2.2794 22 1 4.3186 -3.5264 -0.1800 23 1 2.5336 -5.0113 -0.8784 24 1 -0.3634 0.2262 -1.0024 25 1 -0.3633 -0.9812 0.3054 26 1 -0.3634 0.7551 0.6972 27 1 -0.1501 2.0753 -0.1483 28 1 -0.0300 4.8121 1.6790 29 1 -1.3078 3.6715 1.2152 30 1 -2.3899 5.7761 1.3037 31 1 -2.0953 5.5037 -0.4308 32 1 -0.3498 7.1831 1.4453 33 1 -1.4302 7.8115 0.1705 34 1 -0.6128 7.7831 -2.6731 35 1 -0.9357 6.0331 -2.6362 36 1 0.6198 6.6379 -3.2544 37 1 1.4713 8.9749 -0.7607 38 1 2.3052 7.9174 0.4031 39 1 2.6788 7.7991 -1.3332 40 1 1.8164 4.6575 -1.3616 41 1 1.8797 4.9989 0.3901 42 1 4.4584 1.3144 -0.0122 43 1 4.4132 -1.3612 -0.0012 44 1 1.6547 -2.8720 1.0275 45 1 0.1396 -3.4952 -0.7108 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_10803936.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:30:36 Heat of formation + Delta-G solvation = 7.511660 kcal Electronic energy + Delta-G solvation = -24844.441191 eV Core-core repulsion = 21409.742087 eV Total energy + Delta-G solvation = -3434.699104 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 311.158 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.64411 -41.10044 -38.08204 -37.72829 -35.21430 -33.87862 -32.21604 -30.77698 -29.31708 -28.34968 -27.78897 -27.52770 -26.75900 -24.92995 -22.80758 -21.75074 -21.47208 -20.60325 -18.89228 -18.56021 -18.05122 -17.00488 -16.92570 -16.38945 -15.96108 -15.63862 -15.55844 -15.20903 -14.87421 -14.54781 -14.38607 -14.33474 -14.02968 -13.79873 -13.77492 -13.69665 -13.53158 -13.32576 -13.19585 -13.08882 -13.03674 -12.84183 -12.80089 -12.23204 -12.13404 -12.02692 -11.96928 -11.69417 -11.37453 -10.78868 -10.74937 -10.40622 -9.71756 -9.65543 -9.07432 -8.72086 0.42418 0.98851 1.36145 1.46860 1.52726 1.68208 1.79570 1.89817 1.91579 1.96942 2.15787 2.44461 2.68035 2.96113 3.29445 3.53377 3.65653 3.86691 3.96582 4.07895 4.12520 4.21674 4.37376 4.45421 4.49445 4.62112 4.65363 4.71127 4.79910 4.81069 4.82787 4.86384 4.90243 5.00731 5.12095 5.20079 5.22137 5.35899 5.41269 5.54716 5.61226 5.66438 5.78855 6.00581 6.11983 6.27485 6.34538 6.49353 7.45214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.411 5.411 3 C -0.061 4.061 4 C 0.577 3.423 5 O -0.523 6.523 6 N -0.585 5.585 7 N -0.276 5.276 8 C 0.008 3.992 9 C -0.096 4.096 10 C -0.408 4.408 11 Si 0.996 3.004 12 C -0.439 4.439 13 C -0.445 4.445 14 C -0.238 4.238 15 C -0.096 4.096 16 C -0.215 4.215 17 C 0.065 3.935 18 C -0.064 4.064 19 O -0.551 6.551 20 Si 0.972 3.028 21 H -0.246 1.246 22 H -0.246 1.246 23 H -0.255 1.255 24 H 0.085 0.915 25 H 0.115 0.885 26 H 0.074 0.926 27 H 0.413 0.587 28 H 0.046 0.954 29 H 0.073 0.927 30 H 0.071 0.929 31 H 0.076 0.924 32 H 0.074 0.926 33 H 0.078 0.922 34 H 0.066 0.934 35 H 0.073 0.927 36 H 0.067 0.933 37 H 0.070 0.930 38 H 0.069 0.931 39 H 0.070 0.930 40 H 0.091 0.909 41 H 0.096 0.904 42 H 0.152 0.848 43 H 0.149 0.851 44 H 0.084 0.916 45 H 0.386 0.614 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.904 -4.015 0.940 5.678 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.086 5.086 3 C -0.174 4.174 4 C 0.365 3.635 5 O -0.400 6.400 6 N -0.333 5.333 7 N -0.090 5.090 8 C -0.120 4.120 9 C -0.135 4.135 10 C -0.494 4.494 11 Si 1.191 2.809 12 C -0.547 4.547 13 C -0.554 4.554 14 C -0.412 4.412 15 C -0.123 4.123 16 C -0.239 4.239 17 C -0.052 4.052 18 C -0.173 4.173 19 O -0.358 6.358 20 Si 0.792 3.208 21 H -0.169 1.169 22 H -0.169 1.169 23 H -0.179 1.179 24 H 0.103 0.897 25 H 0.134 0.866 26 H 0.092 0.908 27 H 0.258 0.742 28 H 0.064 0.936 29 H 0.092 0.908 30 H 0.090 0.910 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.097 0.903 34 H 0.085 0.915 35 H 0.092 0.908 36 H 0.086 0.914 37 H 0.090 0.910 38 H 0.088 0.912 39 H 0.089 0.911 40 H 0.109 0.891 41 H 0.114 0.886 42 H 0.170 0.830 43 H 0.167 0.833 44 H 0.101 0.899 45 H 0.235 0.765 Dipole moment (debyes) X Y Z Total from point charges -3.373 -3.221 0.114 4.665 hybrid contribution -0.322 -0.702 1.132 1.371 sum -3.695 -3.923 1.247 5.531 Atomic orbital electron populations 1.22418 0.76749 1.05847 1.03370 1.43849 1.06341 1.04812 1.53622 1.20626 0.91337 0.86085 1.19396 1.17633 0.82524 0.86755 0.76630 1.90882 1.54950 1.43935 1.50248 1.46132 1.07322 1.05054 1.74749 1.64518 1.19377 0.90083 1.35042 1.22773 0.97198 0.99212 0.92827 1.21135 0.97158 0.92316 1.02887 1.26336 1.11516 0.99799 1.11730 0.79779 0.66784 0.66323 0.68062 1.25990 1.06952 1.04259 1.17498 1.26050 1.12801 1.11726 1.04804 1.28150 0.96142 1.09880 1.07006 1.21232 0.94763 0.94269 1.02028 1.20643 0.94811 0.95598 1.12836 1.19926 0.90456 0.86973 1.07880 1.24544 0.94205 0.96939 1.01660 1.86422 1.35078 1.35025 1.79322 0.85372 0.77728 0.76823 0.80911 1.16884 1.16917 1.17854 0.89687 0.86629 0.90764 0.74156 0.93580 0.90811 0.91012 0.90494 0.90738 0.90295 0.91499 0.90764 0.91367 0.91048 0.91206 0.91061 0.89073 0.88627 0.83031 0.83316 0.89868 0.76495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 8.64 59.85 0.52 0.42 16 2 N -0.41 -0.62 3.16 -115.62 -0.37 -0.99 16 3 C -0.06 -0.22 6.88 -81.98 -0.56 -0.78 16 4 C 0.58 2.47 7.48 -12.85 -0.10 2.38 16 5 O -0.52 -3.53 12.41 5.20 0.06 -3.47 16 6 N -0.59 -1.10 5.46 30.26 0.17 -0.94 16 7 N -0.28 -0.47 5.00 -56.97 -0.29 -0.76 16 8 C 0.01 0.00 5.38 -4.31 -0.02 -0.02 16 9 C -0.10 0.07 5.74 -26.44 -0.15 -0.08 16 10 C -0.41 0.30 5.04 37.64 0.19 0.49 16 11 Si 1.00 -0.61 11.99 -169.99 -2.04 -2.65 16 12 C -0.44 -0.03 8.65 101.05 0.87 0.85 16 13 C -0.45 -0.11 8.65 101.05 0.87 0.76 16 14 C -0.24 -0.59 2.87 60.52 0.17 -0.42 16 15 C -0.10 -0.33 10.66 -39.12 -0.42 -0.75 16 16 C -0.21 -0.42 9.37 -39.98 -0.37 -0.79 16 17 C 0.07 0.08 6.18 -81.95 -0.51 -0.42 16 18 C -0.06 0.12 2.88 36.00 0.10 0.23 16 19 O -0.55 1.51 10.05 -35.23 -0.35 1.15 16 20 Si 0.97 -1.69 26.55 -169.99 -4.51 -6.20 16 21 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 22 H -0.25 0.28 6.79 56.52 0.38 0.66 16 23 H -0.25 0.49 7.11 56.52 0.40 0.90 16 24 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 25 H 0.12 -0.31 5.97 -51.93 -0.31 -0.62 16 26 H 0.07 -0.22 6.39 -51.93 -0.33 -0.55 16 27 H 0.41 -0.21 4.48 -185.15 -0.83 -1.04 16 28 H 0.05 0.06 7.78 -51.93 -0.40 -0.34 16 29 H 0.07 -0.06 8.03 -51.93 -0.42 -0.48 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.08 -0.07 7.96 -51.93 -0.41 -0.49 16 32 H 0.07 -0.04 7.99 -51.93 -0.42 -0.45 16 33 H 0.08 -0.10 7.99 -51.93 -0.42 -0.51 16 34 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 35 H 0.07 0.03 7.96 -51.93 -0.41 -0.39 16 36 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 37 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 38 H 0.07 0.04 7.96 -51.93 -0.41 -0.38 16 39 H 0.07 0.04 7.96 -51.93 -0.41 -0.37 16 40 H 0.09 0.36 7.12 -51.93 -0.37 -0.01 16 41 H 0.10 0.42 5.81 -52.36 -0.30 0.11 16 42 H 0.15 0.44 8.06 -52.48 -0.42 0.01 16 43 H 0.15 0.01 6.65 -52.49 -0.35 -0.34 16 44 H 0.08 -0.31 7.96 -51.93 -0.41 -0.72 16 45 H 0.39 -2.69 8.74 45.56 0.40 -2.29 16 LS Contribution 348.87 15.07 5.26 5.26 Total: 0.00 -7.56 348.87 -8.60 -16.16 By element: Atomic # 1 Polarization: -2.29 SS G_CDS: -7.13 Total: -9.42 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: 0.60 Total: 1.85 kcal Atomic # 7 Polarization: -2.19 SS G_CDS: -0.49 Total: -2.68 kcal Atomic # 8 Polarization: -2.02 SS G_CDS: -0.29 Total: -2.31 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: -6.55 Total: -8.85 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -7.56 -8.60 -16.16 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_10803936.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.672 kcal (2) G-P(sol) polarization free energy of solvation -7.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.161 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds