Wall clock time and date at job start Sun Mar 7 2021 08:34:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35709 * 117.00134 * 2 1 4 4 C 1.38684 * 119.86463 * 359.97438 * 3 2 1 5 5 C 1.38439 * 120.03836 * 179.97438 * 4 3 2 6 6 O 1.35657 * 120.12475 * 179.97438 * 5 4 3 7 7 C 1.42900 * 116.99805 * 0.02562 * 6 5 4 8 8 C 1.40305 * 119.75543 * 0.02562 * 5 4 3 9 9 C 1.47303 * 120.13276 * 180.02562 * 8 5 4 10 10 O 1.21620 * 119.99809 * 359.97438 * 9 8 5 11 11 N 1.34775 * 119.99741 * 180.02562 * 9 8 5 12 12 N 1.36603 * 119.99978 * 185.02074 * 11 9 8 13 13 C 1.46358 * 110.99602 * 124.54393 * 12 11 9 14 14 C 1.52624 * 111.88879 * 203.19759 * 13 12 11 15 15 C 1.53934 * 109.31335 * 283.47944 * 14 13 12 16 16 Si 1.87528 * 106.84527 * 57.20700 * 15 14 13 17 17 C 1.86299 * 110.00676 * 75.50232 * 16 15 14 18 18 C 1.86304 * 110.00200 * 196.80562 * 16 15 14 19 19 C 1.47719 * 110.99991 * 248.89873 * 12 11 9 20 20 C 1.39853 * 119.72998 * 0.27757 * 8 5 4 21 21 C 1.37548 * 119.96428 * 359.42271 * 20 8 5 22 22 C 1.50701 * 119.88100 * 180.29507 * 21 20 8 23 23 O 1.42899 * 109.47273 * 255.27906 * 22 21 20 24 24 Si 1.86297 * 109.46775 * 15.28399 * 22 21 20 25 25 H 1.48496 * 109.47618 * 59.99841 * 24 22 21 26 26 H 1.48506 * 109.46881 * 179.97438 * 24 22 21 27 27 H 1.48497 * 109.47295 * 299.99246 * 24 22 21 28 28 H 1.09007 * 109.47140 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47225 * 300.00125 * 1 2 3 30 30 H 1.09000 * 109.46890 * 60.00858 * 1 2 3 31 31 H 1.08001 * 119.98195 * 359.97420 * 4 3 2 32 32 H 1.08997 * 109.46849 * 299.99928 * 7 6 5 33 33 H 1.08998 * 109.47029 * 60.00251 * 7 6 5 34 34 H 1.09000 * 109.46927 * 179.97438 * 7 6 5 35 35 H 0.97003 * 120.00072 * 5.02837 * 11 9 8 36 36 H 1.08996 * 108.99315 * 82.57931 * 13 12 11 37 37 H 1.08993 * 108.93458 * 323.77715 * 13 12 11 38 38 H 1.09001 * 109.49514 * 163.53014 * 14 13 12 39 39 H 1.08998 * 109.52630 * 43.44727 * 14 13 12 40 40 H 1.08995 * 109.97839 * 297.87452 * 15 14 13 41 41 H 1.08995 * 110.05186 * 176.57804 * 15 14 13 42 42 H 1.08999 * 109.46696 * 59.99671 * 17 16 15 43 43 H 1.09005 * 109.46791 * 300.00145 * 17 16 15 44 44 H 1.08998 * 109.47376 * 179.97438 * 17 16 15 45 45 H 1.09002 * 109.46894 * 298.69043 * 18 16 15 46 46 H 1.09003 * 109.46997 * 58.68270 * 18 16 15 47 47 H 1.08998 * 109.47381 * 178.68297 * 18 16 15 48 48 H 1.08996 * 109.95158 * 56.14276 * 19 12 11 49 49 H 1.09001 * 109.94669 * 294.88007 * 19 12 11 50 50 H 1.08004 * 120.01939 * 179.69931 * 20 8 5 51 51 H 1.09006 * 109.46483 * 135.28158 * 22 21 20 52 52 H 0.96706 * 113.99661 * 60.00423 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2092 0.0000 4 6 1.2871 2.3705 -0.0005 5 6 1.9119 3.6059 0.0000 6 8 1.1721 4.7430 -0.0011 7 6 -0.2490 4.5924 -0.0021 8 6 3.3131 3.6775 0.0005 9 6 3.9865 4.9876 0.0017 10 8 3.3277 6.0100 0.0017 11 7 5.3327 5.0533 0.0017 12 7 5.9574 6.2635 0.1063 13 6 6.8912 6.2760 1.2332 14 6 7.1659 7.6932 1.7288 15 6 8.1335 8.3935 0.7578 16 14 7.3313 8.3471 -0.9365 17 6 5.9585 9.6034 -1.0264 18 6 8.6021 8.6974 -2.2531 19 6 6.6355 6.6201 -1.1567 20 6 4.0677 2.5001 -0.0054 21 6 3.4353 1.2787 0.0004 22 6 4.2504 0.0111 0.0007 23 8 4.2151 -0.5782 -1.3006 24 14 6.0130 0.4066 0.4560 25 1 6.0497 1.0190 1.8083 26 1 6.8162 -0.8426 0.4570 27 1 6.5784 1.3582 -0.5339 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 0.5137 -0.8901 31 1 0.2087 2.3111 -0.0014 32 1 -0.5554 4.0428 -0.8921 33 1 -0.5568 4.0435 0.8878 34 1 -0.7186 5.5760 -0.0024 35 1 5.8579 4.2411 -0.0727 36 1 7.8309 5.8211 0.9204 37 1 6.4682 5.6905 2.0494 38 1 7.6140 7.6509 2.7216 39 1 6.2304 8.2506 1.7753 40 1 9.0855 7.8632 0.7337 41 1 8.2908 9.4267 1.0672 42 1 6.3652 10.5991 -0.8493 43 1 5.2087 9.3770 -0.2683 44 1 5.4989 9.5694 -2.0141 45 1 9.0173 9.6938 -2.1014 46 1 9.4008 7.9580 -2.1930 47 1 8.1318 8.6453 -3.2351 48 1 5.9200 6.6095 -1.9789 49 1 7.4436 5.9164 -1.3565 50 1 5.1466 2.5499 -0.0099 51 1 3.8353 -0.6874 0.7274 52 1 4.5699 -0.0111 -1.9989 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_12297780.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:34:22 Heat of formation + Delta-G solvation = -108.452739 kcal Electronic energy + Delta-G solvation = -32842.036024 eV Core-core repulsion = 28546.606094 eV Total energy + Delta-G solvation = -4295.429930 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 368.177 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.02935 -40.64367 -39.94102 -38.56541 -38.09350 -36.90245 -34.81134 -32.42884 -32.18979 -30.75946 -29.37223 -29.05903 -28.36091 -28.20135 -27.55416 -26.11929 -25.29511 -24.02283 -22.71468 -21.80588 -21.35802 -20.06990 -18.84989 -18.56067 -17.96192 -17.58905 -17.20047 -16.71502 -16.62096 -16.53766 -16.48222 -15.84729 -15.76293 -15.48655 -15.24526 -15.09876 -14.80409 -14.76110 -14.44342 -14.34765 -14.06535 -14.01971 -13.80218 -13.55042 -13.52810 -13.33068 -13.22406 -13.10059 -12.96309 -12.76384 -12.59216 -12.52052 -12.26965 -12.18701 -12.05228 -11.99823 -11.81683 -11.63496 -11.18823 -10.82163 -10.52887 -10.40179 -10.32333 -9.97624 -9.89180 -9.63967 -9.11159 -0.17515 0.13149 1.07351 1.27935 1.42411 1.44880 1.78753 1.83250 1.85667 1.94638 2.07003 2.13399 2.17502 2.58541 2.78279 3.37635 3.47275 3.47772 3.64098 3.74735 3.83289 3.97614 4.00841 4.07585 4.08488 4.16245 4.16289 4.17024 4.26081 4.43077 4.45459 4.51713 4.54439 4.58576 4.64263 4.68445 4.69369 4.74732 4.79087 4.86630 4.93361 4.94382 4.99031 5.04329 5.05913 5.26252 5.31216 5.39900 5.45117 5.74173 5.84618 6.03132 6.30999 6.45286 6.58813 6.60496 7.75047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.294 6.294 3 C 0.225 3.775 4 C -0.313 4.313 5 C 0.236 3.764 6 O -0.273 6.273 7 C 0.018 3.982 8 C -0.204 4.204 9 C 0.580 3.420 10 O -0.491 6.491 11 N -0.590 5.590 12 N -0.272 5.272 13 C 0.024 3.976 14 C -0.100 4.100 15 C -0.409 4.409 16 Si 1.029 2.971 17 C -0.442 4.442 18 C -0.450 4.450 19 C -0.261 4.261 20 C -0.020 4.020 21 C -0.198 4.198 22 C -0.061 4.061 23 O -0.533 6.533 24 Si 0.936 3.064 25 H -0.245 1.245 26 H -0.247 1.247 27 H -0.252 1.252 28 H 0.107 0.893 29 H 0.059 0.941 30 H 0.059 0.941 31 H 0.146 0.854 32 H 0.058 0.942 33 H 0.058 0.942 34 H 0.107 0.893 35 H 0.371 0.629 36 H 0.045 0.955 37 H 0.081 0.919 38 H 0.073 0.927 39 H 0.079 0.921 40 H 0.074 0.926 41 H 0.080 0.920 42 H 0.066 0.934 43 H 0.078 0.922 44 H 0.067 0.933 45 H 0.073 0.927 46 H 0.068 0.932 47 H 0.070 0.930 48 H 0.091 0.909 49 H 0.051 0.949 50 H 0.133 0.867 51 H 0.119 0.881 52 H 0.373 0.627 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.191 -1.789 0.136 1.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.205 6.205 3 C 0.177 3.823 4 C -0.333 4.333 5 C 0.186 3.814 6 O -0.183 6.183 7 C -0.076 4.076 8 C -0.209 4.209 9 C 0.368 3.632 10 O -0.363 6.363 11 N -0.336 5.336 12 N -0.088 5.088 13 C -0.104 4.104 14 C -0.138 4.138 15 C -0.496 4.496 16 Si 1.222 2.778 17 C -0.551 4.551 18 C -0.558 4.558 19 C -0.434 4.434 20 C -0.038 4.038 21 C -0.199 4.199 22 C -0.172 4.172 23 O -0.338 6.338 24 Si 0.758 3.242 25 H -0.168 1.168 26 H -0.171 1.171 27 H -0.177 1.177 28 H 0.125 0.875 29 H 0.077 0.923 30 H 0.078 0.922 31 H 0.163 0.837 32 H 0.076 0.924 33 H 0.076 0.924 34 H 0.126 0.874 35 H 0.210 0.790 36 H 0.063 0.937 37 H 0.099 0.901 38 H 0.092 0.908 39 H 0.098 0.902 40 H 0.093 0.907 41 H 0.099 0.901 42 H 0.085 0.915 43 H 0.097 0.903 44 H 0.086 0.914 45 H 0.093 0.907 46 H 0.087 0.913 47 H 0.089 0.911 48 H 0.110 0.890 49 H 0.070 0.930 50 H 0.151 0.849 51 H 0.137 0.863 52 H 0.219 0.781 Dipole moment (debyes) X Y Z Total from point charges 0.014 -1.048 0.809 1.324 hybrid contribution 0.162 -0.841 -0.640 1.069 sum 0.176 -1.889 0.169 1.904 Atomic orbital electron populations 1.23219 0.77700 1.04809 1.01635 1.86161 1.21812 1.26004 1.86536 1.18665 0.91104 0.83928 0.88586 1.21306 1.01182 0.91431 1.19352 1.18679 0.89752 0.85190 0.87751 1.86412 1.18847 1.27316 1.85732 1.23246 0.78379 1.04704 1.01321 1.18998 0.90604 0.93357 1.17947 1.17580 0.80507 0.88368 0.76756 1.90828 1.63769 1.35335 1.46391 1.45516 1.06075 1.04210 1.77830 1.62934 1.30209 1.12523 1.03156 1.22582 0.94544 0.99460 0.93770 1.21177 1.00064 0.93852 0.98732 1.26370 1.03991 1.03484 1.15709 0.79242 0.66520 0.65105 0.66900 1.26013 1.13265 1.10796 1.04982 1.26116 1.11776 1.05267 1.12628 1.28084 1.02776 1.18118 0.94446 1.20855 0.99020 0.90418 0.93554 1.19387 0.91464 0.95711 1.13346 1.24724 1.08415 0.94606 0.89494 1.86568 1.86656 1.44529 1.16044 0.85948 0.75817 0.81162 0.81272 1.16828 1.17051 1.17659 0.87478 0.92253 0.92220 0.83677 0.92387 0.92379 0.87436 0.78989 0.93704 0.90052 0.90846 0.90190 0.90731 0.90100 0.91461 0.90258 0.91377 0.90739 0.91268 0.91067 0.89045 0.93022 0.84944 0.86344 0.78088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 2 O -0.29 -0.32 9.80 -18.83 -0.18 -0.51 16 3 C 0.23 0.31 6.67 -39.06 -0.26 0.05 16 4 C -0.31 -0.31 8.01 -39.34 -0.31 -0.62 16 5 C 0.24 0.72 6.70 -38.73 -0.26 0.46 16 6 O -0.27 -1.07 8.56 -40.60 -0.35 -1.42 16 7 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 8 C -0.20 -0.62 5.89 -104.83 -0.62 -1.24 16 9 C 0.58 2.81 7.86 -12.58 -0.10 2.71 16 10 O -0.49 -4.21 15.48 -16.67 -0.26 -4.47 16 11 N -0.59 -1.39 4.65 30.40 0.14 -1.25 16 12 N -0.27 -0.58 4.15 -56.97 -0.24 -0.82 16 13 C 0.02 0.01 5.38 -4.31 -0.02 -0.02 16 14 C -0.10 0.02 5.74 -26.44 -0.15 -0.13 16 15 C -0.41 0.53 5.04 37.64 0.19 0.72 16 16 Si 1.03 -1.52 11.99 -169.99 -2.04 -3.55 16 17 C -0.44 -0.25 8.65 101.05 0.87 0.62 16 18 C -0.45 0.62 8.65 101.05 0.87 1.49 16 19 C -0.26 -0.11 4.86 60.51 0.29 0.18 16 20 C -0.02 -0.01 8.13 -39.23 -0.32 -0.33 16 21 C -0.20 -0.18 5.27 -104.52 -0.55 -0.73 16 22 C -0.06 0.00 2.37 36.01 0.09 0.09 16 23 O -0.53 -0.38 12.88 -35.23 -0.45 -0.84 16 24 Si 0.94 -0.91 25.50 -169.99 -4.33 -5.24 16 25 H -0.25 0.13 7.11 56.52 0.40 0.53 16 26 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 27 H -0.25 0.47 6.72 56.52 0.38 0.85 16 28 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 29 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 30 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 31 H 0.15 -0.20 4.50 -52.49 -0.24 -0.43 16 32 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 33 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 34 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 35 H 0.37 -0.06 6.86 -185.15 -1.27 -1.33 16 36 H 0.04 -0.05 7.78 -51.93 -0.40 -0.45 16 37 H 0.08 0.04 8.03 -51.93 -0.42 -0.38 16 38 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.08 0.06 7.96 -51.93 -0.41 -0.35 16 40 H 0.07 -0.13 7.99 -51.93 -0.42 -0.55 16 41 H 0.08 -0.13 7.99 -51.93 -0.42 -0.54 16 42 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 43 H 0.08 0.17 7.96 -51.93 -0.41 -0.24 16 44 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 45 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 46 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 47 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 48 H 0.09 0.14 7.99 -51.93 -0.41 -0.28 16 49 H 0.05 -0.04 7.92 -51.93 -0.41 -0.45 16 50 H 0.13 -0.17 3.21 -52.48 -0.17 -0.34 16 51 H 0.12 -0.01 7.82 -51.93 -0.41 -0.41 16 52 H 0.37 -0.99 8.70 45.56 0.40 -0.60 16 LS Contribution 412.32 15.07 6.21 6.21 Total: 0.00 -9.29 412.32 -8.52 -17.81 By element: Atomic # 1 Polarization: -2.38 SS G_CDS: -8.73 Total: -11.11 kcal Atomic # 6 Polarization: 3.47 SS G_CDS: 1.70 Total: 5.18 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: -0.09 Total: -2.07 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -1.24 Total: -7.23 kcal Atomic # 14 Polarization: -2.43 SS G_CDS: -6.37 Total: -8.80 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -9.29 -8.52 -17.81 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_12297780.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.639 kcal (2) G-P(sol) polarization free energy of solvation -9.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.524 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds