Wall clock time and date at job start Sun Mar 7 2021 08:34:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86297 * 109.98382 * 2 1 4 4 C 1.87517 * 110.00164 * 121.31521 * 2 1 3 5 5 C 1.53937 * 106.84944 * 163.09566 * 4 2 1 6 6 C 1.52628 * 109.31108 * 302.79789 * 5 4 2 7 7 N 1.46362 * 111.88952 * 76.51737 * 6 5 4 8 8 N 1.36603 * 110.99348 * 156.80133 * 7 6 5 9 9 C 1.34774 * 119.99902 * 235.44914 * 8 7 6 10 10 O 1.21576 * 120.00241 * 354.98576 * 9 8 7 11 11 C 1.47696 * 119.99913 * 174.97816 * 9 8 7 12 12 C 1.39618 * 120.16608 * 0.02562 * 11 9 8 13 13 C 1.37898 * 119.87730 * 180.02562 * 12 11 9 14 14 C 1.50702 * 119.88954 * 180.02562 * 13 12 11 15 15 O 1.42897 * 109.47458 * 64.98127 * 14 13 12 16 16 Si 1.86305 * 109.46785 * 184.98281 * 14 13 12 17 17 H 1.48506 * 109.46811 * 179.97438 * 16 14 13 18 18 H 1.48494 * 109.47083 * 299.99341 * 16 14 13 19 19 H 1.48498 * 109.47314 * 60.00119 * 16 14 13 20 20 C 1.38416 * 120.21762 * 359.97438 * 13 12 11 21 21 C 1.38241 * 120.34072 * 0.02562 * 20 13 12 22 22 C 1.38277 * 120.11996 * 0.27527 * 21 20 13 23 23 F 1.35093 * 120.11387 * 179.72420 * 22 21 20 24 24 C 1.47723 * 111.30812 * 280.98145 * 7 6 5 25 25 H 1.09005 * 109.46731 * 298.68797 * 1 2 3 26 26 H 1.09001 * 109.47069 * 58.67995 * 1 2 3 27 27 H 1.08997 * 109.47585 * 178.68650 * 1 2 3 28 28 H 1.09000 * 109.47169 * 181.31433 * 3 2 1 29 29 H 1.08996 * 109.47665 * 301.31513 * 3 2 1 30 30 H 1.08999 * 109.47380 * 61.31801 * 3 2 1 31 31 H 1.09005 * 109.97769 * 43.76552 * 4 2 1 32 32 H 1.08997 * 110.05444 * 282.47366 * 4 2 1 33 33 H 1.08994 * 109.49875 * 182.84539 * 5 4 2 34 34 H 1.09002 * 109.49312 * 62.74552 * 5 4 2 35 35 H 1.08998 * 108.99652 * 315.90291 * 6 5 4 36 36 H 1.09000 * 108.93180 * 197.09784 * 6 5 4 37 37 H 0.96997 * 119.99945 * 55.46508 * 8 7 6 38 38 H 1.07998 * 120.06107 * 0.04831 * 12 11 9 39 39 H 1.09001 * 109.46718 * 304.97410 * 14 13 12 40 40 H 0.96696 * 114.00019 * 180.02562 * 15 14 13 41 41 H 1.08001 * 119.82987 * 179.97438 * 20 13 12 42 42 H 1.08003 * 119.94500 * 180.02562 * 21 20 13 43 43 H 1.09002 * 109.94708 * 179.68692 * 24 7 6 44 44 H 1.09003 * 109.94200 * 300.93789 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4997 1.7508 0.0000 4 6 2.5044 -0.9158 1.5054 5 6 3.9816 -1.2491 1.2290 6 6 4.0831 -2.0637 -0.0577 7 7 3.9261 -1.2261 -1.2477 8 7 4.5042 -1.8116 -2.3381 9 6 5.4351 -1.1433 -3.0475 10 8 5.6946 0.0124 -2.7734 11 6 6.1401 -1.8150 -4.1580 12 6 5.8446 -3.1419 -4.4762 13 6 6.5068 -3.7634 -5.5139 14 6 6.1876 -5.1955 -5.8578 15 8 4.8397 -5.2845 -6.3238 16 14 7.3462 -5.7867 -7.1917 17 1 7.0321 -7.1981 -7.5303 18 1 7.1832 -4.9393 -8.4002 19 1 8.7469 -5.6943 -6.7075 20 6 7.4629 -3.0758 -6.2412 21 6 7.7626 -1.7617 -5.9340 22 6 7.1115 -1.1268 -4.8923 23 9 7.4085 0.1556 -4.5886 24 6 2.5042 -0.9181 -1.5035 25 1 -0.3633 0.4934 0.9016 26 1 -0.3633 0.5342 -0.8779 27 1 -0.3634 -1.0273 -0.0236 28 1 3.5894 1.7412 -0.0236 29 1 2.1220 2.2749 -0.8779 30 1 2.1604 2.2609 0.9015 31 1 1.9366 -1.8346 1.6522 32 1 2.4245 -0.2836 2.3896 33 1 4.3853 -1.8286 2.0592 34 1 4.5489 -0.3247 1.1201 35 1 3.3054 -2.8274 -0.0564 36 1 5.0578 -2.5503 -0.0923 37 1 4.2447 -2.7082 -2.6018 38 1 5.0985 -3.6805 -3.9108 39 1 6.3074 -5.8175 -4.9708 40 1 4.5648 -6.1800 -6.5637 41 1 7.9780 -3.5688 -7.0524 42 1 8.5094 -1.2312 -6.5060 43 1 2.4134 -0.2899 -2.3897 44 1 1.9428 -1.8421 -1.6424 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_12335834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:34:37 Heat of formation + Delta-G solvation = -84.700894 kcal Electronic energy + Delta-G solvation = -26016.205743 eV Core-core repulsion = 22200.791416 eV Total energy + Delta-G solvation = -3815.414327 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 326.137 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -49.78543 -41.29696 -40.10402 -38.37002 -37.58448 -34.94905 -33.13643 -32.49143 -31.03840 -29.38919 -28.37542 -27.60736 -26.69757 -25.85978 -24.51207 -22.86236 -21.85558 -21.39747 -19.26291 -18.75475 -18.31839 -18.20156 -17.42722 -16.87988 -16.46614 -16.40623 -16.10689 -15.69883 -15.32225 -15.07318 -14.88015 -14.80406 -14.58416 -14.41369 -14.27973 -14.07482 -13.89147 -13.81818 -13.55809 -13.32311 -13.23099 -13.11828 -12.99581 -12.75665 -12.53527 -12.19662 -12.09121 -12.03420 -11.89482 -11.28679 -10.84488 -10.75087 -10.52845 -10.37943 -10.33639 -10.08037 -9.78561 -9.70725 -0.44792 -0.05229 0.95607 1.28461 1.35201 1.37332 1.72305 1.75213 1.79374 1.83053 2.05944 2.54442 2.57778 3.06445 3.13210 3.29687 3.46321 3.53622 3.63689 3.91129 3.94369 4.03503 4.12003 4.16462 4.39020 4.47029 4.49134 4.60133 4.66288 4.68036 4.69488 4.71400 4.81185 4.84018 4.89278 4.91701 4.96982 5.01804 5.09973 5.23478 5.37001 5.44013 5.57656 5.72802 5.78171 6.29424 6.37793 6.42132 7.56327 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.031 2.969 3 C -0.443 4.443 4 C -0.410 4.410 5 C -0.100 4.100 6 C 0.026 3.974 7 N -0.275 5.275 8 N -0.582 5.582 9 C 0.574 3.426 10 O -0.494 6.494 11 C -0.170 4.170 12 C -0.029 4.029 13 C -0.095 4.095 14 C -0.081 4.081 15 O -0.544 6.544 16 Si 0.942 3.058 17 H -0.253 1.253 18 H -0.245 1.245 19 H -0.246 1.246 20 C -0.067 4.067 21 C -0.154 4.154 22 C 0.168 3.832 23 F -0.110 7.110 24 C -0.261 4.261 25 H 0.074 0.926 26 H 0.070 0.930 27 H 0.068 0.932 28 H 0.078 0.922 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.074 0.926 32 H 0.081 0.919 33 H 0.074 0.926 34 H 0.079 0.921 35 H 0.046 0.954 36 H 0.081 0.919 37 H 0.377 0.623 38 H 0.137 0.863 39 H 0.081 0.919 40 H 0.383 0.617 41 H 0.136 0.864 42 H 0.150 0.850 43 H 0.091 0.909 44 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.383 -6.822 -0.093 6.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.224 2.776 3 C -0.552 4.552 4 C -0.496 4.496 5 C -0.139 4.139 6 C -0.102 4.102 7 N -0.090 5.090 8 N -0.327 5.327 9 C 0.361 3.639 10 O -0.366 6.366 11 C -0.175 4.175 12 C -0.048 4.048 13 C -0.096 4.096 14 C -0.191 4.191 15 O -0.351 6.351 16 Si 0.764 3.236 17 H -0.177 1.177 18 H -0.168 1.168 19 H -0.170 1.170 20 C -0.085 4.085 21 C -0.173 4.173 22 C 0.148 3.852 23 F -0.088 7.088 24 C -0.434 4.434 25 H 0.093 0.907 26 H 0.090 0.910 27 H 0.088 0.912 28 H 0.097 0.903 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.093 0.907 32 H 0.099 0.901 33 H 0.092 0.908 34 H 0.098 0.902 35 H 0.064 0.936 36 H 0.099 0.901 37 H 0.217 0.783 38 H 0.155 0.845 39 H 0.098 0.902 40 H 0.231 0.769 41 H 0.153 0.847 42 H 0.168 0.832 43 H 0.110 0.890 44 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -0.309 -5.161 -0.365 5.183 hybrid contribution -0.906 -1.616 -0.089 1.855 sum -1.214 -6.777 -0.454 6.900 Atomic orbital electron populations 1.26116 1.20340 1.04520 1.04832 0.79215 0.65855 0.67764 0.64750 1.26024 1.07371 1.17690 1.04080 1.26379 1.00690 1.08094 1.14412 1.21189 0.96660 1.01140 0.94901 1.22571 1.02243 0.95243 0.90140 1.62961 1.13956 1.38325 0.93808 1.45421 1.41748 1.17793 1.27775 1.17724 0.78933 0.86100 0.81159 1.90852 1.63149 1.15626 1.66993 1.20032 1.01446 0.95743 1.00327 1.20989 0.96582 0.91919 0.95301 1.19202 0.98047 0.95339 0.96982 1.24701 0.91820 0.96301 1.06322 1.86501 1.26925 1.34388 1.87258 0.85785 0.78598 0.80397 0.78821 1.17684 1.16816 1.16980 1.21071 0.95983 0.93667 0.97739 1.21115 1.02497 0.95585 0.98124 1.17690 0.94030 0.79559 0.93966 1.91633 1.91331 1.33920 1.91869 1.28099 0.90845 1.06986 1.17485 0.90710 0.91042 0.91247 0.90296 0.91347 0.91394 0.90689 0.90052 0.90772 0.90198 0.93580 0.90064 0.78338 0.84505 0.90154 0.76909 0.84676 0.83183 0.89046 0.92854 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.67 8.65 101.05 0.87 1.55 16 2 Si 1.03 -1.70 11.99 -169.99 -2.04 -3.74 16 3 C -0.44 -0.25 8.65 101.05 0.87 0.62 16 4 C -0.41 0.64 5.03 37.65 0.19 0.83 16 5 C -0.10 0.06 5.74 -26.43 -0.15 -0.10 16 6 C 0.03 -0.01 5.38 -4.31 -0.02 -0.03 16 7 N -0.27 -0.47 4.15 -56.96 -0.24 -0.70 16 8 N -0.58 -0.95 4.66 30.49 0.14 -0.81 16 9 C 0.57 2.53 7.87 -12.40 -0.10 2.43 16 10 O -0.49 -4.22 15.67 5.30 0.08 -4.14 16 11 C -0.17 -0.42 5.88 -104.91 -0.62 -1.04 16 12 C -0.03 0.00 9.16 -39.19 -0.36 -0.36 16 13 C -0.10 0.04 5.38 -104.68 -0.56 -0.52 16 14 C -0.08 0.20 2.79 36.01 0.10 0.30 16 15 O -0.54 1.06 12.81 -35.23 -0.45 0.61 16 16 Si 0.94 -2.29 25.13 -169.99 -4.27 -6.56 16 17 H -0.25 0.52 7.11 56.52 0.40 0.93 16 18 H -0.24 0.27 7.04 56.52 0.40 0.66 16 19 H -0.25 0.46 7.11 56.52 0.40 0.86 16 20 C -0.07 0.03 8.66 -39.51 -0.34 -0.31 16 21 C -0.15 -0.07 10.01 -39.57 -0.40 -0.46 16 22 C 0.17 0.52 7.29 -38.96 -0.28 0.23 16 23 F -0.11 -0.62 15.55 2.25 0.04 -0.58 16 24 C -0.26 -0.05 4.86 60.52 0.29 0.25 16 25 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 26 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 27 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 28 H 0.08 0.17 7.96 -51.93 -0.41 -0.24 16 29 H 0.07 0.06 7.96 -51.93 -0.41 -0.35 16 30 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 31 H 0.07 -0.16 7.99 -51.93 -0.42 -0.57 16 32 H 0.08 -0.14 7.99 -51.93 -0.42 -0.56 16 33 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 34 H 0.08 0.04 7.96 -51.93 -0.41 -0.37 16 35 H 0.05 -0.07 7.78 -51.93 -0.40 -0.48 16 36 H 0.08 -0.02 8.03 -51.93 -0.42 -0.44 16 37 H 0.38 -0.45 6.87 -185.16 -1.27 -1.72 16 38 H 0.14 -0.33 6.42 -52.49 -0.34 -0.67 16 39 H 0.08 -0.36 7.96 -51.93 -0.41 -0.78 16 40 H 0.38 -2.35 8.74 45.56 0.40 -1.96 16 41 H 0.14 -0.31 4.84 -52.49 -0.25 -0.56 16 42 H 0.15 -0.25 8.06 -52.48 -0.42 -0.68 16 43 H 0.09 0.13 7.99 -51.93 -0.41 -0.29 16 44 H 0.05 -0.06 7.92 -51.93 -0.41 -0.47 16 LS Contribution 361.04 15.07 5.44 5.44 Total: 0.00 -8.56 361.04 -8.69 -17.25 By element: Atomic # 1 Polarization: -3.28 SS G_CDS: -6.90 Total: -10.17 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: -0.50 Total: 3.40 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: -0.09 Total: -1.51 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.37 Total: -3.53 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.04 Total: -0.58 kcal Atomic # 14 Polarization: -3.99 SS G_CDS: -6.31 Total: -10.30 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -8.56 -8.69 -17.25 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_12335834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.451 kcal (2) G-P(sol) polarization free energy of solvation -8.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.008 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.249 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds