Wall clock time and date at job start Sun Mar 7 2021 08:56:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86298 * 110.06253 * 2 1 4 4 C 1.87519 * 110.00460 * 238.63602 * 2 1 3 5 5 C 1.53932 * 106.85037 * 196.90512 * 4 2 1 6 6 C 1.52615 * 109.31339 * 57.20278 * 5 4 2 7 7 N 1.46357 * 111.89052 * 283.47597 * 6 5 4 8 8 N 1.36604 * 111.00312 * 203.19380 * 7 6 5 9 9 C 1.34777 * 119.99536 * 111.11944 * 8 7 6 10 10 O 1.21553 * 120.00347 * 354.98362 * 9 8 7 11 11 C 1.47847 * 119.99899 * 174.97688 * 9 8 7 12 12 C 1.39556 * 120.14266 * 180.24934 * 11 9 8 13 13 C 1.37982 * 119.87742 * 180.27328 * 12 11 9 14 14 C 1.50693 * 119.92866 * 179.73332 * 13 12 11 15 15 O 1.42899 * 109.47467 * 64.72477 * 14 13 12 16 16 Si 1.86302 * 109.47580 * 184.72881 * 14 13 12 17 17 H 1.48499 * 109.46690 * 299.99672 * 16 14 13 18 18 H 1.48501 * 109.46738 * 59.99639 * 16 14 13 19 19 H 1.48500 * 109.47198 * 179.97438 * 16 14 13 20 20 C 1.38322 * 120.15291 * 359.45632 * 13 12 11 21 21 C 1.38472 * 120.28473 * 0.30012 * 20 13 12 22 22 Br 1.89091 * 119.93978 * 179.97438 * 21 20 13 23 23 C 1.38033 * 120.12041 * 359.97099 * 21 20 13 24 24 C 1.47724 * 111.30390 * 79.02413 * 7 6 5 25 25 H 1.09001 * 109.47036 * 298.64035 * 1 2 3 26 26 H 1.08999 * 109.47120 * 58.63741 * 1 2 3 27 27 H 1.08997 * 109.46686 * 178.63705 * 1 2 3 28 28 H 1.09006 * 109.47434 * 181.36078 * 3 2 1 29 29 H 1.09001 * 109.46991 * 301.36029 * 3 2 1 30 30 H 1.09000 * 109.47294 * 61.36050 * 3 2 1 31 31 H 1.09005 * 109.97354 * 316.23277 * 4 2 1 32 32 H 1.08996 * 109.98168 * 77.47572 * 4 2 1 33 33 H 1.09003 * 109.49788 * 177.15625 * 5 4 2 34 34 H 1.09005 * 109.49672 * 297.21440 * 5 4 2 35 35 H 1.09001 * 108.99799 * 162.85866 * 6 5 4 36 36 H 1.08995 * 109.00109 * 44.09615 * 6 5 4 37 37 H 0.97000 * 120.00344 * 291.12596 * 8 7 6 38 38 H 1.08005 * 120.06273 * 0.02562 * 12 11 9 39 39 H 1.09004 * 109.46923 * 304.73014 * 14 13 12 40 40 H 0.96701 * 114.00048 * 59.99909 * 15 14 13 41 41 H 1.07998 * 119.86109 * 180.27235 * 20 13 12 42 42 H 1.08001 * 120.07872 * 179.97438 * 23 21 20 43 43 H 1.08999 * 109.95341 * 59.06116 * 24 7 6 44 44 H 1.09004 * 109.95008 * 180.32145 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5021 1.7499 0.0000 4 6 2.5045 -0.9171 -1.5046 5 6 3.9817 -1.2502 -1.2279 6 6 4.0831 -2.0636 0.0594 7 7 3.9263 -1.2250 1.2486 8 7 4.5043 -1.8095 2.3396 9 6 5.6121 -1.2698 2.8855 10 8 6.1492 -0.3174 2.3546 11 6 6.1738 -1.8360 4.1304 12 6 7.3177 -1.2762 4.7011 13 6 7.8406 -1.8125 5.8600 14 6 9.0792 -1.2127 6.4739 15 8 8.7990 0.1200 6.9066 16 14 9.6092 -2.2412 7.9341 17 1 8.5196 -2.2671 8.9427 18 1 9.9004 -3.6262 7.4843 19 1 10.8301 -1.6504 8.5387 20 6 7.2272 -2.8959 6.4626 21 6 6.0890 -3.4534 5.9048 22 35 5.2587 -4.9348 6.7364 23 6 5.5593 -2.9295 4.7427 24 6 2.5043 -0.9169 1.5043 25 1 -0.3633 0.4926 0.9019 26 1 -0.3633 0.5348 -0.8775 27 1 -0.3632 -1.0274 -0.0244 28 1 3.5918 1.7388 -0.0244 29 1 2.1244 2.2747 -0.8776 30 1 2.1641 2.2602 0.9019 31 1 1.9367 -1.8360 -1.6506 32 1 2.4232 -0.2850 -2.3888 33 1 4.3854 -1.8303 -2.0577 34 1 4.5491 -0.3257 -1.1204 35 1 5.0573 -2.5512 0.0952 36 1 3.3055 -2.8273 0.0588 37 1 4.1176 -2.6130 2.7213 38 1 7.7952 -0.4272 4.2344 39 1 9.8790 -1.1937 5.7335 40 1 8.0956 0.1793 7.5675 41 1 7.6379 -3.3092 7.3719 42 1 4.6717 -3.3651 4.3080 43 1 1.9429 -1.8407 1.6440 44 1 2.4135 -0.2878 2.3899 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_12335870.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:34 Heat of formation + Delta-G solvation = -40.908608 kcal Electronic energy + Delta-G solvation = -25332.965305 eV Core-core repulsion = 21649.085928 eV Total energy + Delta-G solvation = -3683.879378 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 386.057 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -41.58609 -40.29521 -38.43049 -37.68425 -35.03655 -33.65899 -33.38073 -31.31366 -30.51704 -29.44173 -28.43778 -27.64773 -27.08784 -25.96134 -24.05730 -22.85671 -21.92388 -21.46552 -19.34627 -18.56764 -17.81048 -17.61070 -16.97147 -16.76413 -16.38201 -15.80038 -15.54857 -15.39535 -15.13806 -14.93829 -14.81499 -14.77023 -14.46195 -14.12126 -14.07099 -13.87397 -13.61917 -13.38302 -13.29952 -13.18048 -13.04650 -13.00957 -12.34808 -12.23213 -12.10876 -12.05261 -11.99396 -11.81536 -11.52846 -11.34312 -10.91449 -10.82610 -10.58985 -10.45682 -10.32703 -10.23040 -9.96251 -9.71605 -0.52244 -0.20873 0.35593 0.99077 1.29771 1.31408 1.39601 1.63500 1.69341 1.77625 1.81106 2.00823 2.49233 2.53808 3.18413 3.21734 3.36534 3.42445 3.73360 3.80397 3.92369 3.93582 4.08824 4.17636 4.22479 4.31170 4.47617 4.49480 4.58306 4.62232 4.63399 4.66929 4.70048 4.75929 4.84086 4.89898 4.90478 5.00685 5.03865 5.22565 5.35063 5.35964 5.39761 5.65983 5.72124 6.22327 6.33004 6.42407 7.46438 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.034 2.966 3 C -0.444 4.444 4 C -0.410 4.410 5 C -0.100 4.100 6 C 0.025 3.975 7 N -0.274 5.274 8 N -0.582 5.582 9 C 0.576 3.424 10 O -0.500 6.500 11 C -0.122 4.122 12 C -0.013 4.013 13 C -0.118 4.118 14 C -0.079 4.079 15 O -0.533 6.533 16 Si 0.939 3.061 17 H -0.247 1.247 18 H -0.246 1.246 19 H -0.246 1.246 20 C -0.073 4.073 21 C -0.093 4.093 22 Br -0.035 7.035 23 C -0.055 4.055 24 C -0.261 4.261 25 H 0.070 0.930 26 H 0.074 0.926 27 H 0.069 0.931 28 H 0.078 0.922 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.074 0.926 32 H 0.081 0.919 33 H 0.073 0.927 34 H 0.080 0.920 35 H 0.080 0.920 36 H 0.044 0.956 37 H 0.377 0.623 38 H 0.152 0.848 39 H 0.126 0.874 40 H 0.378 0.622 41 H 0.136 0.864 42 H 0.137 0.863 43 H 0.055 0.945 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.662 -2.556 0.273 3.700 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.226 2.774 3 C -0.552 4.552 4 C -0.497 4.497 5 C -0.139 4.139 6 C -0.103 4.103 7 N -0.090 5.090 8 N -0.327 5.327 9 C 0.362 3.638 10 O -0.373 6.373 11 C -0.128 4.128 12 C -0.032 4.032 13 C -0.120 4.120 14 C -0.190 4.190 15 O -0.338 6.338 16 Si 0.761 3.239 17 H -0.171 1.171 18 H -0.169 1.169 19 H -0.170 1.170 20 C -0.093 4.093 21 C -0.173 4.173 22 Br 0.051 6.949 23 C -0.076 4.076 24 C -0.434 4.434 25 H 0.090 0.910 26 H 0.093 0.907 27 H 0.088 0.912 28 H 0.097 0.903 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.093 0.907 32 H 0.100 0.900 33 H 0.092 0.908 34 H 0.099 0.901 35 H 0.098 0.902 36 H 0.063 0.937 37 H 0.217 0.783 38 H 0.170 0.830 39 H 0.143 0.857 40 H 0.225 0.775 41 H 0.154 0.846 42 H 0.154 0.846 43 H 0.073 0.927 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -1.584 -2.377 0.459 2.893 hybrid contribution -1.225 -1.030 0.211 1.614 sum -2.809 -3.407 0.670 4.466 Atomic orbital electron populations 1.26120 1.20300 1.04583 1.04859 0.79186 0.65830 0.67663 0.64685 1.26032 1.07328 1.17677 1.04181 1.26386 1.00757 1.08093 1.14430 1.21180 0.96546 1.01194 0.94959 1.22606 1.02198 0.95220 0.90304 1.63006 1.13976 1.38114 0.93922 1.45503 1.29041 1.29281 1.28903 1.17877 0.79455 0.83201 0.83232 1.90808 1.58542 1.26361 1.61568 1.19958 0.98204 0.97883 0.96737 1.21299 0.92197 0.97339 0.92409 1.20351 0.98638 0.96433 0.96552 1.25009 0.96764 0.90049 1.07171 1.86568 1.59863 1.24468 1.62858 0.85821 0.81699 0.79008 0.77398 1.17098 1.16902 1.16975 1.21267 0.93684 0.95042 0.99298 1.21622 0.99013 0.98081 0.98570 1.96837 1.79752 1.38424 1.79906 1.21286 0.98683 0.94332 0.93263 1.28097 0.90465 1.07145 1.17675 0.91041 0.90659 0.91207 0.90312 0.91299 0.91341 0.90706 0.90039 0.90837 0.90145 0.90183 0.93728 0.78345 0.83043 0.85668 0.77484 0.84626 0.84564 0.92665 0.88904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.99 8.65 101.05 0.87 1.87 16 2 Si 1.03 -2.55 11.99 -169.99 -2.04 -4.59 16 3 C -0.44 0.19 8.65 101.05 0.87 1.07 16 4 C -0.41 0.77 5.04 37.64 0.19 0.96 16 5 C -0.10 0.06 5.74 -26.44 -0.15 -0.09 16 6 C 0.02 -0.01 5.38 -4.32 -0.02 -0.03 16 7 N -0.27 -0.23 4.15 -56.97 -0.24 -0.47 16 8 N -0.58 -0.34 4.65 30.53 0.14 -0.20 16 9 C 0.58 1.55 7.88 -12.33 -0.10 1.46 16 10 O -0.50 -3.26 16.68 5.32 0.09 -3.17 16 11 C -0.12 -0.10 5.87 -104.97 -0.62 -0.71 16 12 C -0.01 -0.01 9.22 -39.18 -0.36 -0.37 16 13 C -0.12 0.05 5.35 -104.69 -0.56 -0.51 16 14 C -0.08 0.10 2.80 36.00 0.10 0.20 16 15 O -0.53 0.21 12.83 -35.23 -0.45 -0.24 16 16 Si 0.94 -1.32 25.13 -169.99 -4.27 -5.59 16 17 H -0.25 0.35 7.04 56.52 0.40 0.74 16 18 H -0.25 0.21 7.11 56.52 0.40 0.62 16 19 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 20 C -0.07 0.03 8.41 -39.46 -0.33 -0.30 16 21 C -0.09 0.02 6.22 -39.57 -0.25 -0.23 16 22 Br -0.03 0.01 33.69 -68.01 -2.29 -2.29 16 23 C -0.06 0.04 9.27 -39.15 -0.36 -0.32 16 24 C -0.26 0.28 4.85 60.52 0.29 0.58 16 25 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 26 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 27 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 28 H 0.08 0.08 7.96 -51.93 -0.41 -0.33 16 29 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 30 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 31 H 0.07 -0.17 7.99 -51.93 -0.42 -0.59 16 32 H 0.08 -0.17 7.99 -51.93 -0.42 -0.58 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.08 0.03 7.96 -51.93 -0.41 -0.38 16 35 H 0.08 0.03 8.03 -51.93 -0.42 -0.39 16 36 H 0.04 -0.07 7.78 -51.93 -0.40 -0.47 16 37 H 0.38 -0.74 6.88 -185.15 -1.27 -2.02 16 38 H 0.15 0.22 7.65 -52.48 -0.40 -0.18 16 39 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 40 H 0.38 -1.38 8.70 45.56 0.40 -0.98 16 41 H 0.14 -0.19 4.84 -52.49 -0.25 -0.44 16 42 H 0.14 -0.38 6.42 -52.49 -0.34 -0.72 16 43 H 0.05 -0.13 7.92 -51.93 -0.41 -0.54 16 44 H 0.09 -0.06 7.99 -51.93 -0.41 -0.47 16 LS Contribution 377.74 15.07 5.69 5.69 Total: 0.00 -6.77 377.74 -10.66 -17.43 By element: Atomic # 1 Polarization: -3.28 SS G_CDS: -6.88 Total: -10.16 kcal Atomic # 6 Polarization: 3.99 SS G_CDS: -0.42 Total: 3.57 kcal Atomic # 7 Polarization: -0.57 SS G_CDS: -0.09 Total: -0.66 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.36 Total: -3.41 kcal Atomic # 14 Polarization: -3.87 SS G_CDS: -6.31 Total: -10.18 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -6.77 -10.66 -17.43 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_12335870.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.476 kcal (2) G-P(sol) polarization free energy of solvation -6.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.661 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.432 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.909 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds