Wall clock time and date at job start Sun Mar 7 2021 09:00:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86292 * 110.06409 * 2 1 4 4 C 1.87522 * 109.99896 * 238.63390 * 2 1 3 5 5 C 1.53933 * 106.84716 * 196.90341 * 4 2 1 6 6 C 1.52623 * 109.31098 * 57.20651 * 5 4 2 7 7 N 1.46358 * 111.89218 * 283.47495 * 6 5 4 8 8 N 1.36594 * 111.00256 * 203.19883 * 7 6 5 9 9 C 1.34774 * 120.00299 * 111.12359 * 8 7 6 10 10 O 1.21570 * 120.00125 * 354.97487 * 9 8 7 11 11 C 1.47723 * 120.00229 * 174.97550 * 9 8 7 12 12 C 1.39630 * 120.11787 * 359.97438 * 11 9 8 13 13 C 1.37861 * 119.87831 * 179.72903 * 12 11 9 14 14 C 1.38634 * 120.12150 * 0.22786 * 13 12 11 15 15 F 1.35092 * 119.88359 * 180.02562 * 14 13 12 16 16 C 1.38684 * 120.23672 * 0.04972 * 14 13 12 17 17 C 1.50698 * 119.93800 * 179.97438 * 16 14 13 18 18 O 1.42892 * 109.47508 * 75.00003 * 17 16 14 19 19 Si 1.86302 * 109.47039 * 314.99373 * 17 16 14 20 20 H 1.48497 * 109.46652 * 60.00451 * 19 17 16 21 21 H 1.48500 * 109.47053 * 180.02562 * 19 17 16 22 22 H 1.48496 * 109.47042 * 300.00407 * 19 17 16 23 23 C 1.37816 * 120.11983 * 359.97438 * 16 14 13 24 24 C 1.47726 * 111.30251 * 79.01917 * 7 6 5 25 25 H 1.09012 * 109.47148 * 298.63734 * 1 2 3 26 26 H 1.08995 * 109.47021 * 58.63372 * 1 2 3 27 27 H 1.09002 * 109.47521 * 178.64100 * 1 2 3 28 28 H 1.08998 * 109.47087 * 181.36699 * 3 2 1 29 29 H 1.09007 * 109.46982 * 301.36283 * 3 2 1 30 30 H 1.09005 * 109.47463 * 61.36177 * 3 2 1 31 31 H 1.08996 * 109.97931 * 316.23500 * 4 2 1 32 32 H 1.08996 * 109.97749 * 77.48376 * 4 2 1 33 33 H 1.08995 * 109.49807 * 177.15753 * 5 4 2 34 34 H 1.09002 * 109.49613 * 297.22028 * 5 4 2 35 35 H 1.09004 * 108.99396 * 162.85941 * 6 5 4 36 36 H 1.08991 * 108.99720 * 44.09869 * 6 5 4 37 37 H 0.96999 * 120.00300 * 291.12135 * 8 7 6 38 38 H 1.07999 * 120.05884 * 359.97438 * 12 11 9 39 39 H 1.08001 * 119.93676 * 180.25588 * 13 12 11 40 40 H 1.09009 * 109.46907 * 195.00047 * 17 16 14 41 41 H 0.96708 * 114.00035 * 299.99626 * 18 17 16 42 42 H 1.07999 * 120.05995 * 179.97438 * 23 16 14 43 43 H 1.08997 * 109.94413 * 59.07154 * 24 7 6 44 44 H 1.09005 * 109.94685 * 180.23071 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5021 1.7499 0.0000 4 6 2.5043 -0.9172 -1.5046 5 6 3.9815 -1.2502 -1.2280 6 6 4.0830 -2.0637 0.0594 7 7 3.9262 -1.2251 1.2486 8 7 4.5042 -1.8096 2.3395 9 6 5.6119 -1.2699 2.8855 10 8 6.1493 -0.3175 2.3545 11 6 6.1732 -1.8357 4.1293 12 6 5.5578 -2.9293 4.7417 13 6 6.0891 -3.4569 5.8993 14 6 7.2294 -2.9008 6.4580 15 9 7.7462 -3.4219 7.5922 16 6 7.8413 -1.8109 5.8571 17 6 9.0803 -1.2113 6.4705 18 8 10.1988 -2.0627 6.2140 19 14 8.8409 -1.0377 8.3099 20 1 8.5916 -2.3752 8.9049 21 1 10.0615 -0.4462 8.9143 22 1 7.6785 -0.1528 8.5764 23 6 7.3184 -1.2753 4.6999 24 6 2.5042 -0.9169 1.5043 25 1 -0.3634 0.4926 0.9020 26 1 -0.3633 0.5349 -0.8774 27 1 -0.3634 -1.0274 -0.0244 28 1 3.5918 1.7387 -0.0245 29 1 2.1243 2.2746 -0.8776 30 1 2.1641 2.2602 0.9020 31 1 1.9365 -1.8361 -1.6507 32 1 2.4231 -0.2850 -2.3888 33 1 4.3852 -1.8304 -2.0577 34 1 4.5489 -0.3258 -1.1205 35 1 5.0572 -2.5514 0.0951 36 1 3.3054 -2.8274 0.0587 37 1 4.1175 -2.6131 2.7213 38 1 4.6696 -3.3636 4.3071 39 1 5.6162 -4.3054 6.3714 40 1 9.2633 -0.2294 6.0337 41 1 10.1050 -2.9549 6.5749 42 1 7.7954 -0.4263 4.2330 43 1 1.9429 -1.8407 1.6441 44 1 2.4133 -0.2892 2.3908 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_12496548.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:53 Heat of formation + Delta-G solvation = -80.510498 kcal Electronic energy + Delta-G solvation = -25759.488284 eV Core-core repulsion = 21944.255667 eV Total energy + Delta-G solvation = -3815.232617 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 326.137 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -50.47601 -41.44278 -40.01515 -38.37763 -37.61438 -35.02669 -33.18739 -32.34278 -31.02527 -29.45031 -28.44801 -27.65114 -27.03437 -25.73361 -23.98389 -23.54997 -21.93458 -21.46430 -19.41330 -18.93648 -18.57618 -17.84545 -17.62331 -17.11445 -16.73318 -16.33096 -15.81459 -15.56824 -15.42839 -15.15837 -15.02277 -14.88986 -14.74052 -14.43708 -14.40659 -14.12940 -14.04240 -13.88552 -13.62997 -13.43214 -13.29933 -13.18852 -13.05861 -12.90682 -12.37936 -12.11285 -12.09876 -12.05716 -11.37697 -11.23990 -10.92299 -10.83277 -10.65387 -10.47010 -10.26567 -10.18326 -9.91150 -9.70877 -0.55513 -0.07797 1.09274 1.29789 1.47266 1.50925 1.66495 1.69520 1.76785 1.95644 2.01059 2.48626 2.57902 2.89656 3.21967 3.25852 3.45114 3.51297 3.55038 3.81158 3.92330 4.03116 4.08862 4.25357 4.31286 4.47061 4.52225 4.57527 4.61165 4.62254 4.66362 4.69098 4.74881 4.76664 4.83014 4.88945 4.92671 4.99432 5.02473 5.22053 5.34432 5.38613 5.49774 5.65021 5.71740 6.23653 6.34913 6.42642 7.48258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 1.034 2.966 3 C -0.444 4.444 4 C -0.411 4.411 5 C -0.100 4.100 6 C 0.025 3.975 7 N -0.275 5.275 8 N -0.583 5.583 9 C 0.576 3.424 10 O -0.503 6.503 11 C -0.139 4.139 12 C -0.057 4.057 13 C -0.152 4.152 14 C 0.117 3.883 15 F -0.123 7.123 16 C -0.155 4.155 17 C -0.080 4.080 18 O -0.531 6.531 19 Si 0.936 3.064 20 H -0.229 1.229 21 H -0.251 1.251 22 H -0.251 1.251 23 C -0.008 4.008 24 C -0.260 4.260 25 H 0.070 0.930 26 H 0.074 0.926 27 H 0.069 0.931 28 H 0.078 0.922 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.074 0.926 32 H 0.081 0.919 33 H 0.073 0.927 34 H 0.080 0.920 35 H 0.080 0.920 36 H 0.044 0.956 37 H 0.377 0.623 38 H 0.136 0.864 39 H 0.147 0.853 40 H 0.125 0.875 41 H 0.376 0.624 42 H 0.153 0.847 43 H 0.054 0.946 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.644 -3.050 -0.205 5.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.226 2.774 3 C -0.552 4.552 4 C -0.497 4.497 5 C -0.139 4.139 6 C -0.103 4.103 7 N -0.091 5.091 8 N -0.328 5.328 9 C 0.363 3.637 10 O -0.377 6.377 11 C -0.144 4.144 12 C -0.076 4.076 13 C -0.171 4.171 14 C 0.097 3.903 15 F -0.101 7.101 16 C -0.157 4.157 17 C -0.190 4.190 18 O -0.336 6.336 19 Si 0.757 3.243 20 H -0.152 1.152 21 H -0.175 1.175 22 H -0.174 1.174 23 C -0.027 4.027 24 C -0.433 4.433 25 H 0.089 0.911 26 H 0.093 0.907 27 H 0.088 0.912 28 H 0.097 0.903 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.093 0.907 32 H 0.100 0.900 33 H 0.092 0.908 34 H 0.099 0.901 35 H 0.098 0.902 36 H 0.062 0.938 37 H 0.216 0.784 38 H 0.154 0.846 39 H 0.165 0.835 40 H 0.143 0.857 41 H 0.223 0.777 42 H 0.170 0.830 43 H 0.073 0.927 44 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -3.858 -1.350 0.019 4.087 hybrid contribution -0.913 -2.015 0.317 2.234 sum -4.771 -3.364 0.336 5.847 Atomic orbital electron populations 1.26124 1.20319 1.04573 1.04854 0.79180 0.65802 0.67660 0.64709 1.26034 1.07332 1.17692 1.04174 1.26386 1.00763 1.08086 1.14437 1.21182 0.96534 1.01205 0.94983 1.22605 1.02179 0.95202 0.90315 1.62989 1.13936 1.38171 0.93977 1.45489 1.29092 1.29306 1.28895 1.17897 0.79364 0.83172 0.83304 1.90803 1.58577 1.26538 1.61742 1.19993 0.98473 0.98840 0.97074 1.21189 0.98504 0.93912 0.93981 1.21100 0.96134 1.02319 0.97561 1.17911 0.94144 0.94195 0.84042 1.91593 1.85795 1.85699 1.47043 1.20341 0.99986 0.97429 0.97926 1.24989 0.84567 0.97206 1.12232 1.86572 1.39017 1.26809 1.81233 0.86130 0.81551 0.82288 0.74358 1.15173 1.17528 1.17424 1.21051 0.92308 0.97876 0.91497 1.28093 0.90499 1.07121 1.17617 0.91052 0.90663 0.91215 0.90311 0.91304 0.91349 0.90716 0.90048 0.90843 0.90148 0.90177 0.93765 0.78353 0.84599 0.83533 0.85691 0.77709 0.82979 0.92718 0.88923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.08 8.65 101.05 0.87 1.95 16 2 Si 1.03 -2.75 11.99 -169.99 -2.04 -4.79 16 3 C -0.44 0.26 8.65 101.05 0.87 1.14 16 4 C -0.41 0.83 5.04 37.64 0.19 1.02 16 5 C -0.10 0.08 5.74 -26.44 -0.15 -0.08 16 6 C 0.02 -0.01 5.38 -4.31 -0.02 -0.04 16 7 N -0.27 -0.16 4.15 -56.97 -0.24 -0.40 16 8 N -0.58 -0.09 4.65 30.50 0.14 0.06 16 9 C 0.58 1.39 7.87 -12.39 -0.10 1.29 16 10 O -0.50 -3.19 16.67 5.30 0.09 -3.10 16 11 C -0.14 -0.06 5.87 -104.96 -0.62 -0.68 16 12 C -0.06 0.11 9.53 -39.20 -0.37 -0.26 16 13 C -0.15 0.25 10.01 -39.57 -0.40 -0.14 16 14 C 0.12 -0.01 6.63 -39.27 -0.26 -0.27 16 15 F -0.12 -0.04 12.58 2.25 0.03 -0.01 16 16 C -0.16 -0.05 4.78 -104.61 -0.50 -0.55 16 17 C -0.08 0.00 2.80 36.00 0.10 0.10 16 18 O -0.53 -0.50 12.88 -35.23 -0.45 -0.95 16 19 Si 0.94 0.20 26.09 -169.99 -4.43 -4.23 16 20 H -0.23 -0.12 5.28 56.52 0.30 0.17 16 21 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 22 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 23 C -0.01 -0.01 9.21 -39.20 -0.36 -0.37 16 24 C -0.26 0.36 4.85 60.52 0.29 0.66 16 25 H 0.07 -0.16 7.96 -51.92 -0.41 -0.58 16 26 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 28 H 0.08 0.07 7.96 -51.93 -0.41 -0.34 16 29 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 30 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 31 H 0.07 -0.18 7.99 -51.93 -0.42 -0.60 16 32 H 0.08 -0.18 7.99 -51.93 -0.42 -0.59 16 33 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.08 0.03 7.96 -51.93 -0.41 -0.39 16 35 H 0.08 0.02 8.03 -51.93 -0.42 -0.40 16 36 H 0.04 -0.08 7.78 -51.93 -0.40 -0.48 16 37 H 0.38 -1.03 6.87 -185.16 -1.27 -2.30 16 38 H 0.14 -0.66 6.41 -52.49 -0.34 -1.00 16 39 H 0.15 -0.54 8.06 -52.49 -0.42 -0.96 16 40 H 0.13 -0.14 7.77 -51.92 -0.40 -0.54 16 41 H 0.38 -0.72 8.41 45.56 0.38 -0.34 16 42 H 0.15 0.13 7.59 -52.49 -0.40 -0.26 16 43 H 0.05 -0.14 7.92 -51.93 -0.41 -0.56 16 44 H 0.09 -0.09 7.99 -51.93 -0.42 -0.50 16 LS Contribution 360.22 15.07 5.43 5.43 Total: 0.00 -7.30 360.22 -9.07 -16.36 By element: Atomic # 1 Polarization: -4.99 SS G_CDS: -7.14 Total: -12.13 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: -0.45 Total: 3.77 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -0.09 Total: -0.34 kcal Atomic # 8 Polarization: -3.69 SS G_CDS: -0.37 Total: -4.05 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.03 Total: -0.01 kcal Atomic # 14 Polarization: -2.55 SS G_CDS: -6.47 Total: -9.02 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -7.30 -9.07 -16.36 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_12496548.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.146 kcal (2) G-P(sol) polarization free energy of solvation -7.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds