Wall clock time and date at job start Sun Mar 7 2021 09:02:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.39283 * 121.03408 * 2 1 4 4 C 1.46490 * 134.20202 * 359.90067 * 3 2 1 5 5 C 1.50707 * 126.59548 * 0.37538 * 4 3 2 6 6 O 1.42900 * 109.47219 * 285.00398 * 5 4 3 7 7 Si 1.86309 * 109.46774 * 165.00336 * 5 4 3 8 8 H 1.48501 * 109.47109 * 299.99875 * 7 5 4 9 9 H 1.48493 * 109.47100 * 60.00487 * 7 5 4 10 10 H 1.48502 * 109.46657 * 180.02562 * 7 5 4 11 11 C 1.34180 * 106.80512 * 180.35961 * 4 3 2 12 12 N 1.36939 * 109.95253 * 359.97438 * 11 4 3 13 13 C 1.37156 * 110.11469 * 0.02562 * 12 11 4 14 14 N 1.32826 * 132.96888 * 179.97438 * 13 12 11 15 15 C 1.31308 * 121.89060 * 179.97438 * 14 13 12 16 16 C 1.39754 * 121.02922 * 179.73081 * 2 1 3 17 17 C 1.47663 * 120.45356 * 0.02562 * 16 2 1 18 18 O 1.21576 * 120.00143 * 3.52578 * 17 16 2 19 19 N 1.34777 * 120.00004 * 183.25796 * 17 16 2 20 20 N 1.36606 * 120.00036 * 175.29258 * 19 17 16 21 21 C 1.46358 * 110.99812 * 235.31781 * 20 19 17 22 22 C 1.52628 * 111.88765 * 156.80608 * 21 20 19 23 23 C 1.53930 * 109.31248 * 76.52155 * 22 21 20 24 24 Si 1.87527 * 106.84813 * 302.79445 * 23 22 21 25 25 C 1.86300 * 109.99930 * 163.10028 * 24 23 22 26 26 C 1.86292 * 110.00080 * 284.40239 * 24 23 22 27 27 C 1.47721 * 110.99665 * 110.96716 * 20 19 17 28 28 H 1.09001 * 109.47818 * 263.77189 * 1 2 3 29 29 H 1.09006 * 109.46807 * 23.77156 * 1 2 3 30 30 H 1.08999 * 109.47527 * 143.76210 * 1 2 3 31 31 H 1.09001 * 109.47170 * 45.01025 * 5 4 3 32 32 H 0.96701 * 113.99538 * 180.02562 * 6 5 4 33 33 H 1.08006 * 125.02266 * 179.97438 * 11 4 3 34 34 H 0.97000 * 124.94497 * 180.02562 * 12 11 4 35 35 H 1.07993 * 119.31061 * 180.02562 * 15 14 13 36 36 H 0.96999 * 119.99882 * 355.28866 * 19 17 16 37 37 H 1.09001 * 108.99683 * 277.42578 * 21 20 19 38 38 H 1.09003 * 108.99620 * 36.26596 * 21 20 19 39 39 H 1.09002 * 109.49272 * 196.47607 * 22 21 20 40 40 H 1.08999 * 109.49578 * 316.57016 * 22 21 20 41 41 H 1.08994 * 109.97363 * 62.12828 * 23 22 21 42 42 H 1.08990 * 109.97447 * 183.36888 * 23 22 21 43 43 H 1.08997 * 109.47549 * 60.00114 * 25 24 23 44 44 H 1.09005 * 109.46669 * 180.02562 * 25 24 23 45 45 H 1.09005 * 109.47111 * 299.99581 * 25 24 23 46 46 H 1.09000 * 109.47284 * 60.00276 * 26 24 23 47 47 H 1.09009 * 109.47234 * 180.02562 * 26 24 23 48 48 H 1.09003 * 109.47524 * 299.99634 * 26 24 23 49 49 H 1.08995 * 109.95388 * 303.85583 * 27 20 19 50 50 H 1.09003 * 109.94710 * 65.11749 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6100 -0.0018 5 6 0.4527 3.1705 0.0035 6 8 -0.1255 3.0205 -1.2946 7 14 0.5095 4.9776 0.4532 8 1 1.1104 5.1334 1.8022 9 1 1.3322 5.7098 -0.5428 10 1 -0.8691 5.5297 0.4590 11 6 2.9949 3.3125 -0.0088 12 7 4.0669 2.4604 -0.0110 13 6 3.6348 1.1587 -0.0060 14 7 4.2720 -0.0068 -0.0061 15 6 3.6266 -1.1503 0.0001 16 6 2.2273 -1.1975 0.0056 17 6 1.5224 -2.4950 0.0112 18 8 0.3088 -2.5277 -0.0539 19 7 2.2245 -3.6432 0.0829 20 7 1.5709 -4.8383 0.1850 21 6 2.0247 -5.5857 1.3587 22 6 0.9826 -6.5979 1.8266 23 6 1.0003 -7.8177 0.8879 24 14 0.6789 -7.1753 -0.8443 25 6 1.1771 -8.4564 -2.1017 26 6 -1.1251 -6.7553 -1.0436 27 6 1.7253 -5.6334 -1.0504 28 1 -0.3635 -0.1115 1.0216 29 1 -0.3633 0.9405 -0.4143 30 1 -0.3634 -0.8289 -0.6075 31 1 -0.1512 2.6330 0.7346 32 1 -1.0279 3.3608 -1.3649 33 1 3.0600 4.3905 -0.0122 34 1 4.9966 2.7371 -0.0155 35 1 4.1868 -2.0735 0.0001 36 1 3.1940 -3.6209 0.0619 37 1 2.9451 -6.1136 1.1092 38 1 2.2263 -4.8852 2.1692 39 1 1.2159 -6.9170 2.8424 40 1 -0.0055 -6.1382 1.8071 41 1 1.9742 -8.3054 0.9295 42 1 0.2194 -8.5211 1.1766 43 1 0.5975 -9.3658 -1.9433 44 1 0.9872 -8.0742 -3.1047 45 1 2.2388 -8.6787 -1.9930 46 1 -1.4019 -5.9888 -0.3198 47 1 -1.3023 -6.3835 -2.0528 48 1 -1.7269 -7.6484 -0.8751 49 1 1.3762 -5.0591 -1.9084 50 1 2.7710 -5.9092 -1.1868 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_12890568.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:03 Heat of formation + Delta-G solvation = 5.699589 kcal Electronic energy + Delta-G solvation = -30837.278643 eV Core-core repulsion = 26796.859010 eV Total energy + Delta-G solvation = -4040.419633 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 362.169 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.76754 -40.95029 -39.09938 -38.14972 -37.67437 -35.13187 -34.65924 -32.32233 -31.91724 -30.30644 -29.37200 -28.66369 -28.36467 -27.56463 -26.47342 -25.18799 -24.28508 -23.56744 -21.87402 -21.65597 -20.32694 -19.18484 -18.88424 -18.45259 -18.12225 -17.37974 -16.74135 -16.70711 -16.20277 -15.86964 -15.49890 -15.28706 -15.14029 -14.92053 -14.85600 -14.73079 -14.43082 -14.34852 -14.05691 -13.82851 -13.78955 -13.65824 -13.53363 -13.44767 -13.23759 -13.17387 -13.10138 -12.96320 -12.77281 -12.59449 -12.22065 -12.05601 -12.00132 -11.93459 -11.16664 -10.97919 -10.83382 -10.78145 -10.41851 -10.25355 -10.11456 -9.99569 -9.66492 -9.51982 -9.06436 -0.15058 0.01381 1.09898 1.35717 1.38416 1.43197 1.51927 1.66897 1.78159 1.85323 1.85692 2.06187 2.13888 2.58159 2.94471 3.31633 3.37823 3.43621 3.61104 3.76164 3.82677 3.88425 3.97820 4.10220 4.15670 4.18700 4.34715 4.43313 4.51519 4.54543 4.63653 4.68458 4.69657 4.73072 4.74613 4.82719 4.85978 4.93231 4.97974 5.01069 5.04822 5.12865 5.25655 5.27798 5.39353 5.45513 5.47230 5.61337 5.73106 5.82400 5.84033 6.15894 6.42874 6.53349 6.62733 6.91639 7.67618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.088 3.912 3 C -0.147 4.147 4 C -0.135 4.135 5 C -0.051 4.051 6 O -0.542 6.542 7 Si 0.941 3.059 8 H -0.248 1.248 9 H -0.247 1.247 10 H -0.250 1.250 11 C 0.065 3.935 12 N -0.570 5.570 13 C 0.308 3.692 14 N -0.504 5.504 15 C 0.179 3.821 16 C -0.230 4.230 17 C 0.589 3.411 18 O -0.504 6.504 19 N -0.585 5.585 20 N -0.273 5.273 21 C 0.025 3.975 22 C -0.100 4.100 23 C -0.410 4.410 24 Si 1.031 2.969 25 C -0.451 4.451 26 C -0.442 4.442 27 C -0.261 4.261 28 H 0.080 0.920 29 H 0.080 0.920 30 H 0.107 0.893 31 H 0.077 0.923 32 H 0.379 0.621 33 H 0.181 0.819 34 H 0.426 0.574 35 H 0.160 0.840 36 H 0.375 0.625 37 H 0.045 0.955 38 H 0.081 0.919 39 H 0.073 0.927 40 H 0.079 0.921 41 H 0.074 0.926 42 H 0.080 0.920 43 H 0.073 0.927 44 H 0.070 0.930 45 H 0.068 0.932 46 H 0.078 0.922 47 H 0.067 0.933 48 H 0.066 0.934 49 H 0.091 0.909 50 H 0.052 0.948 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.350 0.644 1.272 1.964 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C 0.080 3.920 3 C -0.154 4.154 4 C -0.142 4.142 5 C -0.162 4.162 6 O -0.348 6.348 7 Si 0.763 3.237 8 H -0.172 1.172 9 H -0.171 1.171 10 H -0.174 1.174 11 C -0.061 4.061 12 N -0.175 5.175 13 C 0.075 3.925 14 N -0.217 5.217 15 C 0.010 3.990 16 C -0.239 4.239 17 C 0.376 3.624 18 O -0.378 6.378 19 N -0.330 5.330 20 N -0.089 5.089 21 C -0.103 4.103 22 C -0.138 4.138 23 C -0.496 4.496 24 Si 1.224 2.776 25 C -0.559 4.559 26 C -0.551 4.551 27 C -0.434 4.434 28 H 0.098 0.902 29 H 0.099 0.901 30 H 0.125 0.875 31 H 0.095 0.905 32 H 0.227 0.773 33 H 0.197 0.803 34 H 0.264 0.736 35 H 0.177 0.823 36 H 0.214 0.786 37 H 0.064 0.936 38 H 0.100 0.900 39 H 0.091 0.909 40 H 0.098 0.902 41 H 0.093 0.907 42 H 0.099 0.901 43 H 0.092 0.908 44 H 0.089 0.911 45 H 0.087 0.913 46 H 0.097 0.903 47 H 0.086 0.914 48 H 0.085 0.915 49 H 0.110 0.890 50 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 1.653 1.572 1.397 2.675 hybrid contribution 0.850 -0.281 -0.154 0.909 sum 2.503 1.291 1.242 3.079 Atomic orbital electron populations 1.21355 0.88854 1.05347 1.03905 1.19874 0.97202 0.88953 0.85998 1.19447 0.92791 0.93449 1.09675 1.19454 0.93169 0.90716 1.10889 1.24072 0.92102 1.10958 0.89027 1.86561 1.33541 1.85511 1.29210 0.85856 0.82209 0.74826 0.80850 1.17157 1.17073 1.17362 1.21680 0.85191 0.95872 1.03408 1.41457 1.09510 1.02704 1.63840 1.18467 0.89324 0.85836 0.98899 1.66425 1.40570 0.95988 1.18731 1.22481 0.90137 0.94346 0.92027 1.20386 0.94653 0.93573 1.15273 1.17652 0.86899 0.81784 0.76035 1.90700 1.13149 1.86378 1.47611 1.45501 1.07495 1.02768 1.77249 1.62959 1.47956 0.95633 1.02355 1.22569 0.97867 0.96859 0.92956 1.21182 0.99797 0.93843 0.99021 1.26382 1.05086 1.01703 1.16445 0.79210 0.67457 0.64031 0.66891 1.26128 1.05611 1.12166 1.11977 1.26018 1.18683 1.05344 1.05041 1.28079 1.08030 1.12321 0.94964 0.90169 0.90112 0.87465 0.90472 0.77350 0.80250 0.73580 0.82334 0.78551 0.93634 0.90038 0.90866 0.90217 0.90730 0.90128 0.90758 0.91068 0.91270 0.90270 0.91366 0.91459 0.89042 0.92920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -0.41 8.61 36.00 0.31 -0.10 16 2 C 0.09 0.33 5.98 -103.67 -0.62 -0.29 16 3 C -0.15 -0.52 6.16 -105.13 -0.65 -1.17 16 4 C -0.13 -0.22 5.61 -102.73 -0.58 -0.80 16 5 C -0.05 0.02 1.87 36.01 0.07 0.09 16 6 O -0.54 -0.04 11.62 -35.23 -0.41 -0.45 16 7 Si 0.94 -1.53 26.09 -169.99 -4.44 -5.96 16 8 H -0.25 0.24 7.11 56.52 0.40 0.64 16 9 H -0.25 0.25 7.03 56.52 0.40 0.64 16 10 H -0.25 0.31 7.11 56.52 0.40 0.72 16 11 C 0.06 -0.01 10.44 -16.70 -0.17 -0.18 16 12 N -0.57 -0.24 6.04 -12.11 -0.07 -0.31 16 13 C 0.31 1.00 8.42 -155.70 -1.31 -0.31 16 14 N -0.50 -1.70 10.37 -11.96 -0.12 -1.82 16 15 C 0.18 0.32 10.69 -17.11 -0.18 0.13 16 16 C -0.23 -0.69 5.89 -104.82 -0.62 -1.31 16 17 C 0.59 2.10 7.85 -12.41 -0.10 2.00 16 18 O -0.50 -3.24 13.71 5.30 0.07 -3.16 16 19 N -0.59 -0.67 4.66 30.49 0.14 -0.53 16 20 N -0.27 -0.32 4.15 -56.96 -0.24 -0.56 16 21 C 0.03 -0.01 5.38 -4.31 -0.02 -0.03 16 22 C -0.10 0.07 5.74 -26.44 -0.15 -0.08 16 23 C -0.41 0.68 5.03 37.64 0.19 0.87 16 24 Si 1.03 -1.98 11.99 -169.99 -2.04 -4.02 16 25 C -0.45 0.71 8.65 101.05 0.87 1.59 16 26 C -0.44 -0.04 8.65 101.05 0.87 0.84 16 27 C -0.26 0.06 4.86 60.52 0.29 0.35 16 28 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 29 H 0.08 0.16 4.78 -51.93 -0.25 -0.09 16 30 H 0.11 0.49 5.69 -51.93 -0.30 0.19 16 31 H 0.08 -0.11 7.15 -51.93 -0.37 -0.48 16 32 H 0.38 -1.64 8.74 45.56 0.40 -1.24 16 33 H 0.18 -0.57 6.31 -52.48 -0.33 -0.90 16 34 H 0.43 -1.00 8.96 -40.82 -0.37 -1.37 16 35 H 0.16 -0.27 6.39 -52.49 -0.34 -0.61 16 36 H 0.38 -0.54 6.88 -185.15 -1.27 -1.81 16 37 H 0.05 -0.07 7.78 -51.93 -0.40 -0.48 16 38 H 0.08 -0.02 8.03 -51.93 -0.42 -0.44 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.08 0.01 7.96 -51.93 -0.41 -0.40 16 41 H 0.07 -0.15 7.99 -51.93 -0.42 -0.57 16 42 H 0.08 -0.15 7.99 -51.93 -0.42 -0.56 16 43 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 44 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 45 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 46 H 0.08 0.12 7.96 -51.93 -0.41 -0.29 16 47 H 0.07 0.03 7.96 -51.92 -0.41 -0.39 16 48 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 49 H 0.09 0.08 7.99 -51.93 -0.41 -0.34 16 50 H 0.05 -0.07 7.92 -51.93 -0.41 -0.48 16 LS Contribution 394.32 15.07 5.94 5.94 Total: 0.00 -9.49 394.32 -10.79 -20.28 By element: Atomic # 1 Polarization: -3.17 SS G_CDS: -7.84 Total: -11.01 kcal Atomic # 6 Polarization: 3.40 SS G_CDS: -1.79 Total: 1.60 kcal Atomic # 7 Polarization: -2.93 SS G_CDS: -0.29 Total: -3.22 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -0.34 Total: -3.62 kcal Atomic # 14 Polarization: -3.51 SS G_CDS: -6.47 Total: -9.98 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.49 -10.79 -20.28 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_12890568.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.981 kcal (2) G-P(sol) polarization free energy of solvation -9.492 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.282 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds