Wall clock time and date at job start Sun Mar 7 2021 09:15:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.46900 * 110.99898 * 2 1 4 4 C 1.39047 * 111.00158 * 236.04776 * 2 1 3 5 5 C 1.39199 * 119.92959 * 59.72258 * 4 2 1 6 6 C 1.37628 * 120.06345 * 179.72449 * 5 4 2 7 7 C 1.39774 * 119.92988 * 0.55143 * 6 5 4 8 8 C 1.47528 * 120.06546 * 179.70349 * 7 6 5 9 9 O 1.21590 * 119.99979 * 180.02562 * 8 7 6 10 10 N 1.34777 * 120.00043 * 0.02562 * 8 7 6 11 11 N 1.36601 * 119.99970 * 174.98164 * 10 8 7 12 12 C 1.46358 * 111.00289 * 111.12086 * 11 10 8 13 13 C 1.52626 * 111.88792 * 203.19220 * 12 11 10 14 14 C 1.53927 * 109.31480 * 283.47950 * 13 12 11 15 15 Si 1.87523 * 106.84914 * 57.20245 * 14 13 12 16 16 C 1.86298 * 110.00227 * 196.90206 * 15 14 13 17 17 C 1.86305 * 110.00064 * 75.50718 * 15 14 13 18 18 C 1.47724 * 110.99336 * 235.47263 * 11 10 8 19 19 C 1.39814 * 119.86600 * 359.72495 * 7 6 5 20 20 C 1.37577 * 119.92882 * 359.97438 * 19 7 6 21 21 C 1.50707 * 119.96793 * 180.02562 * 20 19 7 22 22 O 1.42901 * 109.47296 * 104.97330 * 21 20 19 23 23 Si 1.86305 * 109.46614 * 344.97514 * 21 20 19 24 24 H 1.48501 * 109.47070 * 60.00111 * 23 21 20 25 25 H 1.48503 * 109.46957 * 180.02562 * 23 21 20 26 26 H 1.48497 * 109.47189 * 300.00249 * 23 21 20 27 27 H 1.09004 * 109.47208 * 183.95364 * 1 2 3 28 28 H 1.08997 * 109.47306 * 63.95614 * 1 2 3 29 29 H 1.09000 * 109.46977 * 303.95106 * 1 2 3 30 30 H 1.09000 * 109.46951 * 56.04985 * 3 2 1 31 31 H 1.09010 * 109.46994 * 176.04513 * 3 2 1 32 32 H 1.08998 * 109.47381 * 296.04231 * 3 2 1 33 33 H 1.07995 * 119.96375 * 359.97438 * 5 4 2 34 34 H 1.07997 * 120.03019 * 180.27812 * 6 5 4 35 35 H 0.96999 * 119.99846 * 354.97665 * 10 8 7 36 36 H 1.08997 * 108.99409 * 323.80995 * 12 11 10 37 37 H 1.08996 * 108.99369 * 82.57174 * 12 11 10 38 38 H 1.09000 * 109.49437 * 163.52612 * 13 12 11 39 39 H 1.09005 * 109.52040 * 43.44600 * 13 12 11 40 40 H 1.08998 * 109.97225 * 297.87153 * 14 13 12 41 41 H 1.08997 * 110.05237 * 176.58402 * 14 13 12 42 42 H 1.09006 * 109.47081 * 177.27500 * 16 15 14 43 43 H 1.08996 * 109.47471 * 297.27354 * 16 15 14 44 44 H 1.08993 * 109.47029 * 57.27626 * 16 15 14 45 45 H 1.09003 * 109.46691 * 302.72097 * 17 15 14 46 46 H 1.09000 * 109.47482 * 62.72370 * 17 15 14 47 47 H 1.09000 * 109.47268 * 182.72899 * 17 15 14 48 48 H 1.08996 * 109.94981 * 294.87926 * 18 11 10 49 49 H 1.08994 * 109.95506 * 56.05379 * 18 11 10 50 50 H 1.08006 * 120.03343 * 180.02562 * 19 7 6 51 51 H 1.09000 * 109.46886 * 224.97955 * 21 20 19 52 52 H 0.96697 * 113.99456 * 60.00741 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 1.6484 -0.3447 -2.3773 6 6 2.1447 -1.0569 -3.4452 7 6 2.9604 -2.1699 -3.2226 8 6 3.4887 -2.9394 -4.3651 9 8 4.1978 -3.9077 -4.1700 10 7 3.1854 -2.5691 -5.6250 11 7 3.7559 -3.2173 -6.6834 12 6 2.7621 -4.0063 -7.4128 13 6 3.4057 -5.1440 -8.2008 14 6 4.0673 -4.5746 -9.4686 15 14 5.2998 -3.2792 -8.9035 16 6 5.7757 -2.1853 -10.3344 17 6 6.8142 -4.1048 -8.1991 18 6 4.4467 -2.2654 -7.5772 19 6 3.2742 -2.5528 -1.9150 20 6 2.7800 -1.8331 -0.8518 21 6 3.1181 -2.2446 0.5580 22 8 4.0879 -1.3443 1.0975 23 14 3.8121 -3.9735 0.5506 24 1 5.0400 -4.0104 -0.2839 25 1 4.1448 -4.3794 1.9398 26 1 2.8044 -4.9091 -0.0101 27 1 -0.3634 -1.0252 0.0709 28 1 -0.3634 0.4512 -0.9233 29 1 -0.3633 0.5739 0.8525 30 1 1.5898 1.9163 0.8525 31 1 3.0828 1.3432 0.0709 32 1 1.7044 1.8724 -0.9233 33 1 1.0142 0.5125 -2.5484 34 1 1.9006 -0.7587 -4.4541 35 1 2.5621 -1.8423 -5.7801 36 1 2.0504 -4.4255 -6.7016 37 1 2.2285 -3.3536 -8.1037 38 1 2.6418 -5.8685 -8.4831 39 1 4.1605 -5.6325 -7.5845 40 1 3.3131 -4.1168 -10.1087 41 1 4.5827 -5.3681 -10.0097 42 1 6.4543 -1.4064 -9.9864 43 1 6.2707 -2.7829 -11.0998 44 1 4.8806 -1.7263 -10.7542 45 1 6.5220 -4.7605 -7.3789 46 1 7.3031 -4.6915 -8.9769 47 1 7.5032 -3.3455 -7.8294 48 1 3.7222 -1.5908 -8.0333 49 1 5.1833 -1.6933 -7.0132 50 1 3.9045 -3.4122 -1.7399 51 1 2.2168 -2.2176 1.1705 52 1 3.7937 -0.4238 1.1318 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_13422196.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:15:48 Heat of formation + Delta-G solvation = -31.512249 kcal Electronic energy + Delta-G solvation = -29835.741104 eV Core-core repulsion = 25960.048418 eV Total energy + Delta-G solvation = -3875.692686 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 351.189 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.72455 -40.65265 -38.59174 -37.61240 -37.16844 -34.97400 -33.04139 -31.90582 -30.78092 -29.42968 -28.76617 -28.42551 -27.62594 -26.90628 -26.37144 -24.61497 -23.18941 -22.90793 -21.88418 -21.10858 -19.30843 -18.45009 -17.87677 -17.70701 -17.01919 -16.70580 -16.45289 -16.12855 -15.78812 -15.45173 -15.31074 -15.14184 -14.97140 -14.91175 -14.68413 -14.43184 -14.26188 -14.10847 -13.93930 -13.86357 -13.65172 -13.60480 -13.29532 -13.18327 -13.16693 -13.09709 -12.96754 -12.84902 -12.74913 -12.08914 -12.07144 -12.03571 -11.63573 -11.32999 -11.25402 -10.94858 -10.89304 -10.67652 -10.43913 -10.21587 -10.09275 -9.83418 -9.76053 -9.64934 -0.36881 0.14332 1.32924 1.34896 1.64535 1.70711 1.71840 1.79063 1.81998 2.04668 2.13457 2.51285 2.61682 2.71327 3.32040 3.49735 3.62648 3.69533 3.89403 3.94951 3.99414 4.07770 4.11144 4.16433 4.17810 4.31333 4.36034 4.37468 4.43871 4.49260 4.59381 4.61872 4.63216 4.63960 4.69175 4.73188 4.75939 4.77643 4.78730 4.85736 4.91602 5.00896 5.02822 5.11622 5.21164 5.23856 5.36448 5.40239 5.50619 5.60044 5.67722 5.75595 6.12318 6.29539 6.42240 6.70010 7.55193 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.516 5.516 3 C 0.023 3.977 4 C 0.126 3.874 5 C -0.153 4.153 6 C -0.073 4.073 7 C -0.127 4.127 8 C 0.574 3.426 9 O -0.505 6.505 10 N -0.583 5.583 11 N -0.275 5.275 12 C 0.025 3.975 13 C -0.100 4.100 14 C -0.410 4.410 15 Si 1.033 2.967 16 C -0.450 4.450 17 C -0.444 4.444 18 C -0.260 4.260 19 C -0.055 4.055 20 C -0.097 4.097 21 C -0.075 4.075 22 O -0.535 6.535 23 Si 0.998 3.002 24 H -0.247 1.247 25 H -0.253 1.253 26 H -0.247 1.247 27 H 0.073 0.927 28 H 0.034 0.966 29 H 0.078 0.922 30 H 0.080 0.920 31 H 0.074 0.926 32 H 0.035 0.965 33 H 0.129 0.871 34 H 0.126 0.874 35 H 0.377 0.623 36 H 0.079 0.921 37 H 0.043 0.957 38 H 0.073 0.927 39 H 0.080 0.920 40 H 0.074 0.926 41 H 0.081 0.919 42 H 0.070 0.930 43 H 0.074 0.926 44 H 0.068 0.932 45 H 0.078 0.922 46 H 0.068 0.932 47 H 0.067 0.933 48 H 0.054 0.946 49 H 0.092 0.908 50 H 0.144 0.856 51 H 0.084 0.916 52 H 0.367 0.633 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.340 4.461 -2.651 6.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.237 5.237 3 C -0.124 4.124 4 C 0.032 3.968 5 C -0.173 4.173 6 C -0.093 4.093 7 C -0.131 4.131 8 C 0.361 3.639 9 O -0.379 6.379 10 N -0.328 5.328 11 N -0.091 5.091 12 C -0.103 4.103 13 C -0.139 4.139 14 C -0.496 4.496 15 Si 1.226 2.774 16 C -0.558 4.558 17 C -0.552 4.552 18 C -0.433 4.433 19 C -0.074 4.074 20 C -0.099 4.099 21 C -0.184 4.184 22 O -0.341 6.341 23 Si 0.818 3.182 24 H -0.171 1.171 25 H -0.177 1.177 26 H -0.170 1.170 27 H 0.092 0.908 28 H 0.053 0.947 29 H 0.097 0.903 30 H 0.099 0.901 31 H 0.093 0.907 32 H 0.054 0.946 33 H 0.147 0.853 34 H 0.144 0.856 35 H 0.216 0.784 36 H 0.098 0.902 37 H 0.062 0.938 38 H 0.091 0.909 39 H 0.099 0.901 40 H 0.093 0.907 41 H 0.099 0.901 42 H 0.090 0.910 43 H 0.093 0.907 44 H 0.088 0.912 45 H 0.097 0.903 46 H 0.087 0.913 47 H 0.087 0.913 48 H 0.072 0.928 49 H 0.111 0.889 50 H 0.161 0.839 51 H 0.102 0.898 52 H 0.215 0.785 Dipole moment (debyes) X Y Z Total from point charges -2.685 1.897 -1.766 3.731 hybrid contribution -2.022 2.739 -1.391 3.678 sum -4.707 4.636 -3.157 7.322 Atomic orbital electron populations 1.22506 0.84995 1.03188 1.01427 1.59460 1.09236 1.14537 1.40482 1.22555 1.01244 0.86917 1.01635 1.18808 0.95165 0.93923 0.88946 1.21570 1.01852 1.01059 0.92802 1.21145 0.95359 0.93699 0.99062 1.19853 1.01991 0.97833 0.93472 1.17963 0.80546 0.84073 0.81314 1.90798 1.36192 1.26242 1.84623 1.45501 1.47294 1.36664 1.03357 1.62979 1.23459 1.18411 1.04230 1.22600 0.94287 0.96143 0.97247 1.21182 1.00910 0.96548 0.95261 1.26380 1.10407 1.11919 1.00916 0.79193 0.67539 0.66191 0.64504 1.26117 1.05643 1.10165 1.13907 1.26031 1.14287 1.07857 1.07041 1.28089 1.04393 1.03354 1.07483 1.21202 0.96600 0.99005 0.90631 1.20201 0.97816 0.95326 0.96523 1.25167 0.97522 1.05276 0.90411 1.86701 1.41433 1.21194 1.84746 0.84693 0.80691 0.71748 0.81100 1.17084 1.17721 1.17038 0.90781 0.94715 0.90283 0.90147 0.90703 0.94641 0.85277 0.85584 0.78372 0.90211 0.93826 0.90868 0.90142 0.90735 0.90053 0.91050 0.90663 0.91231 0.90303 0.91312 0.91342 0.92792 0.88948 0.83896 0.89836 0.78507 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.33 60.06 0.56 0.51 16 2 N -0.52 0.56 3.71 -186.86 -0.69 -0.13 16 3 C 0.02 -0.06 9.10 60.06 0.55 0.49 16 4 C 0.13 0.03 4.67 -83.86 -0.39 -0.36 16 5 C -0.15 0.12 8.53 -39.45 -0.34 -0.22 16 6 C -0.07 0.04 9.52 -39.23 -0.37 -0.33 16 7 C -0.13 -0.27 5.88 -104.95 -0.62 -0.88 16 8 C 0.57 2.20 7.86 -12.47 -0.10 2.10 16 9 O -0.51 -3.93 16.67 5.29 0.09 -3.84 16 10 N -0.58 -0.72 4.65 30.46 0.14 -0.58 16 11 N -0.27 -0.39 4.15 -56.97 -0.24 -0.62 16 12 C 0.03 0.00 5.38 -4.31 -0.02 -0.02 16 13 C -0.10 0.03 5.74 -26.44 -0.15 -0.12 16 14 C -0.41 0.65 5.04 37.64 0.19 0.84 16 15 Si 1.03 -2.20 11.99 -169.99 -2.04 -4.24 16 16 C -0.45 0.89 8.65 101.05 0.87 1.77 16 17 C -0.44 0.02 8.65 101.05 0.87 0.89 16 18 C -0.26 0.17 4.85 60.52 0.29 0.47 16 19 C -0.06 -0.16 8.19 -39.23 -0.32 -0.48 16 20 C -0.10 -0.17 5.28 -104.49 -0.55 -0.72 16 21 C -0.08 -0.11 2.30 36.01 0.08 -0.03 16 22 O -0.53 -1.20 12.65 -35.23 -0.45 -1.65 16 23 Si 1.00 2.23 25.74 -169.99 -4.38 -2.15 16 24 H -0.25 -0.91 6.73 56.52 0.38 -0.53 16 25 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 26 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.03 -0.09 7.08 -51.93 -0.37 -0.46 16 29 H 0.08 -0.24 8.12 -51.93 -0.42 -0.66 16 30 H 0.08 -0.27 8.12 -51.93 -0.42 -0.69 16 31 H 0.07 -0.18 7.41 -51.92 -0.38 -0.57 16 32 H 0.03 -0.09 7.33 -51.93 -0.38 -0.47 16 33 H 0.13 -0.31 6.98 -52.49 -0.37 -0.68 16 34 H 0.13 -0.41 6.40 -52.49 -0.34 -0.74 16 35 H 0.38 -0.60 6.86 -185.16 -1.27 -1.87 16 36 H 0.08 0.06 8.03 -51.93 -0.42 -0.35 16 37 H 0.04 -0.05 7.78 -51.93 -0.40 -0.46 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.08 0.07 7.96 -51.93 -0.41 -0.35 16 40 H 0.07 -0.15 7.99 -51.93 -0.42 -0.57 16 41 H 0.08 -0.15 7.99 -51.93 -0.42 -0.56 16 42 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 43 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 44 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 45 H 0.08 0.12 7.96 -51.93 -0.41 -0.29 16 46 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 47 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 48 H 0.05 -0.11 7.92 -51.93 -0.41 -0.52 16 49 H 0.09 -0.01 7.99 -51.93 -0.42 -0.42 16 50 H 0.14 0.55 4.46 -52.48 -0.23 0.31 16 51 H 0.08 0.03 7.77 -51.93 -0.40 -0.37 16 52 H 0.37 -0.01 7.49 45.56 0.34 0.33 16 LS Contribution 407.23 15.07 6.14 6.14 Total: 0.00 -6.93 407.23 -10.15 -17.07 By element: Atomic # 1 Polarization: -4.63 SS G_CDS: -9.28 Total: -13.91 kcal Atomic # 6 Polarization: 3.34 SS G_CDS: 0.56 Total: 3.90 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.79 Total: -1.33 kcal Atomic # 8 Polarization: -5.13 SS G_CDS: -0.36 Total: -5.48 kcal Atomic # 14 Polarization: 0.02 SS G_CDS: -6.41 Total: -6.39 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -6.93 -10.15 -17.07 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_13422196.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.438 kcal (2) G-P(sol) polarization free energy of solvation -6.929 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.075 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds