Wall clock time and date at job start Sun Mar 7 2021 09:25:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35978 * 117.00181 * 2 1 4 4 C 1.38682 * 119.99994 * 0.02562 * 3 2 1 5 5 C 1.38155 * 119.99791 * 179.75219 * 4 3 2 6 6 C 1.38672 * 119.99804 * 0.50233 * 5 4 3 7 7 O 1.35986 * 119.99521 * 179.74737 * 6 5 4 8 8 C 1.42901 * 117.00347 * 359.72630 * 7 6 5 9 9 C 1.50693 * 109.47147 * 180.02562 * 8 7 6 10 10 O 1.21277 * 120.00234 * 359.97438 * 9 8 7 11 11 N 1.34780 * 119.99760 * 180.02562 * 9 8 7 12 12 N 1.36601 * 119.99800 * 184.73330 * 11 9 8 13 13 C 1.46361 * 110.99934 * 111.06887 * 12 11 9 14 14 C 1.52625 * 111.88927 * 203.19515 * 13 12 11 15 15 C 1.53926 * 109.31315 * 283.47733 * 14 13 12 16 16 Si 1.87528 * 106.84964 * 57.20569 * 15 14 13 17 17 C 1.86305 * 110.00262 * 196.90363 * 16 15 14 18 18 C 1.86299 * 110.00030 * 75.50348 * 16 15 14 19 19 C 1.47731 * 111.00216 * 235.41915 * 12 11 9 20 20 C 1.38714 * 120.00563 * 359.48022 * 6 5 4 21 21 C 1.50702 * 120.00365 * 180.29828 * 20 6 5 22 22 O 1.42904 * 109.46514 * 284.99207 * 21 20 6 23 23 Si 1.86301 * 109.46961 * 164.99788 * 21 20 6 24 24 H 1.48499 * 109.47483 * 59.99770 * 23 21 20 25 25 H 1.48500 * 109.46715 * 179.97438 * 23 21 20 26 26 H 1.48499 * 109.47174 * 299.99173 * 23 21 20 27 27 C 1.38118 * 119.99768 * 0.26453 * 20 6 5 28 28 H 1.09002 * 109.47005 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47008 * 300.00004 * 1 2 3 30 30 H 1.09000 * 109.47110 * 60.00711 * 1 2 3 31 31 H 1.07997 * 119.99670 * 0.02562 * 4 3 2 32 32 H 1.08001 * 119.99658 * 180.25516 * 5 4 3 33 33 H 1.09002 * 109.46784 * 60.00075 * 8 7 6 34 34 H 1.08997 * 109.47005 * 300.00676 * 8 7 6 35 35 H 0.97000 * 120.00294 * 5.01012 * 11 9 8 36 36 H 1.08994 * 108.99647 * 323.81752 * 13 12 11 37 37 H 1.09001 * 108.99634 * 82.57412 * 13 12 11 38 38 H 1.09002 * 109.49312 * 163.52884 * 14 13 12 39 39 H 1.08996 * 109.52398 * 43.44441 * 14 13 12 40 40 H 1.09001 * 109.97654 * 297.87248 * 15 14 13 41 41 H 1.08996 * 110.05486 * 176.58254 * 15 14 13 42 42 H 1.08997 * 109.46610 * 177.27529 * 17 16 15 43 43 H 1.09004 * 109.46830 * 297.27200 * 17 16 15 44 44 H 1.08998 * 109.47002 * 57.27167 * 17 16 15 45 45 H 1.08995 * 109.46985 * 302.72449 * 18 16 15 46 46 H 1.09000 * 109.47050 * 62.72805 * 18 16 15 47 47 H 1.09003 * 109.46966 * 182.72940 * 18 16 15 48 48 H 1.09006 * 109.94180 * 294.88792 * 19 12 11 49 49 H 1.08994 * 109.94603 * 56.14261 * 19 12 11 50 50 H 1.08996 * 109.47306 * 44.99357 * 21 20 6 51 51 H 0.96699 * 113.99561 * 59.99987 * 22 21 20 52 52 H 1.07996 * 120.00235 * 179.97438 * 27 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 1.2911 2.3747 0.0005 5 6 1.9184 3.6056 0.0057 6 6 3.3032 3.6781 -0.0002 7 8 3.9206 4.8897 -0.0003 8 6 3.0807 6.0458 -0.0002 9 6 3.9349 7.2873 -0.0010 10 8 5.1439 7.1915 -0.0010 11 7 3.3553 8.5041 -0.0005 12 7 4.1259 9.6277 -0.0989 13 6 3.9218 10.2926 -1.3866 14 6 5.1116 11.1685 -1.7696 15 6 5.0703 12.4704 -0.9495 16 14 5.0716 11.9740 0.8589 17 6 4.5159 13.4059 1.9132 18 6 6.7787 11.4294 1.3689 19 6 3.8665 10.5478 1.0274 20 6 4.0587 2.5147 -0.0003 21 6 5.5637 2.5936 0.0001 22 8 6.0214 2.9669 -1.3012 23 14 6.2724 0.9316 0.4544 24 1 5.8301 -0.0827 -0.5359 25 1 7.7554 1.0092 0.4542 26 1 5.7968 0.5436 1.8066 27 6 3.4317 1.2841 -0.0002 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 0.2126 2.3181 0.0014 32 1 1.3302 4.5113 0.0103 33 1 2.4515 6.0378 0.8899 34 1 2.4513 6.0377 -0.8901 35 1 2.3913 8.5821 0.0736 36 1 3.7756 9.5359 -2.1574 37 1 3.0283 10.9140 -1.3274 38 1 5.0612 11.4061 -2.8322 39 1 6.0389 10.6355 -1.5595 40 1 4.1631 13.0282 -1.1818 41 1 5.9476 13.0786 -1.1693 42 1 4.4734 13.0937 2.9567 43 1 5.2221 14.2296 1.8088 44 1 3.5270 13.7320 1.5910 45 1 7.1038 10.6079 0.7306 46 1 7.4718 12.2645 1.2676 47 1 6.7591 11.0973 2.4069 48 1 2.8425 10.9182 0.9766 49 1 4.0301 10.0325 1.9738 50 1 5.8884 3.3380 0.7269 51 1 5.6907 3.8239 -1.6034 52 1 4.0198 0.3783 -0.0007 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:25:24 Heat of formation + Delta-G solvation = -113.442732 kcal Electronic energy + Delta-G solvation = -31620.255120 eV Core-core repulsion = 27324.608807 eV Total energy + Delta-G solvation = -4295.646313 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 368.177 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.80479 -40.99020 -39.99773 -38.59120 -37.79406 -36.79292 -34.99046 -32.79572 -32.20688 -30.85759 -29.48094 -29.15737 -28.44726 -28.06476 -27.64939 -26.47101 -24.95554 -23.58113 -22.37126 -21.97083 -21.65492 -19.53243 -18.93272 -18.79267 -18.01589 -17.81516 -17.57269 -17.34902 -16.73787 -16.53939 -16.15032 -15.86292 -15.55299 -15.44948 -15.17741 -15.04795 -14.88860 -14.63100 -14.48022 -14.15779 -14.13295 -14.01365 -13.88874 -13.65052 -13.63567 -13.45860 -13.30960 -13.19277 -13.06732 -13.04359 -12.62259 -12.28686 -12.14318 -12.07906 -12.06166 -11.60459 -11.49822 -11.34003 -11.06197 -10.92513 -10.86184 -10.71599 -10.47298 -10.29602 -10.04863 -9.74948 -8.79652 0.09554 0.37433 1.06403 1.37028 1.52652 1.63653 1.67383 1.72535 1.74410 1.84098 2.14190 2.26640 2.39938 2.49453 2.58662 3.24709 3.45814 3.57478 3.66892 3.76838 3.84197 3.90185 3.98371 4.05908 4.09167 4.14642 4.15182 4.17849 4.26985 4.35573 4.43718 4.49648 4.54956 4.55286 4.59902 4.61478 4.64823 4.67226 4.73386 4.83265 4.89448 4.97661 5.06774 5.13811 5.20104 5.20929 5.32530 5.37920 5.42317 5.65757 5.68494 6.07465 6.17792 6.32117 6.41355 6.79297 7.43569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.104 3.896 4 C -0.165 4.165 5 C -0.165 4.165 6 C 0.103 3.897 7 O -0.288 6.288 8 C 0.045 3.955 9 C 0.529 3.471 10 O -0.484 6.484 11 N -0.585 5.585 12 N -0.273 5.273 13 C 0.025 3.975 14 C -0.101 4.101 15 C -0.411 4.411 16 Si 1.034 2.966 17 C -0.451 4.451 18 C -0.444 4.444 19 C -0.260 4.260 20 C -0.097 4.097 21 C -0.085 4.085 22 O -0.535 6.535 23 Si 1.014 2.986 24 H -0.251 1.251 25 H -0.255 1.255 26 H -0.248 1.248 27 C -0.116 4.116 28 H 0.102 0.898 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.135 0.865 32 H 0.133 0.867 33 H 0.093 0.907 34 H 0.094 0.906 35 H 0.379 0.621 36 H 0.079 0.921 37 H 0.045 0.955 38 H 0.073 0.927 39 H 0.080 0.920 40 H 0.074 0.926 41 H 0.081 0.919 42 H 0.070 0.930 43 H 0.074 0.926 44 H 0.069 0.931 45 H 0.078 0.922 46 H 0.068 0.932 47 H 0.067 0.933 48 H 0.055 0.945 49 H 0.092 0.908 50 H 0.082 0.918 51 H 0.371 0.629 52 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.206 4.084 0.859 8.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.058 3.942 4 C -0.184 4.184 5 C -0.184 4.184 6 C 0.058 3.942 7 O -0.200 6.200 8 C -0.035 4.035 9 C 0.313 3.687 10 O -0.354 6.354 11 N -0.332 5.332 12 N -0.090 5.090 13 C -0.103 4.103 14 C -0.139 4.139 15 C -0.497 4.497 16 Si 1.227 2.773 17 C -0.559 4.559 18 C -0.553 4.553 19 C -0.433 4.433 20 C -0.098 4.098 21 C -0.193 4.193 22 O -0.341 6.341 23 Si 0.834 3.166 24 H -0.175 1.175 25 H -0.179 1.179 26 H -0.172 1.172 27 C -0.134 4.134 28 H 0.121 0.879 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.153 0.847 32 H 0.151 0.849 33 H 0.111 0.889 34 H 0.112 0.888 35 H 0.217 0.783 36 H 0.098 0.902 37 H 0.063 0.937 38 H 0.092 0.908 39 H 0.098 0.902 40 H 0.093 0.907 41 H 0.100 0.900 42 H 0.090 0.910 43 H 0.093 0.907 44 H 0.088 0.912 45 H 0.097 0.903 46 H 0.087 0.913 47 H 0.087 0.913 48 H 0.073 0.927 49 H 0.111 0.889 50 H 0.100 0.900 51 H 0.219 0.781 52 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -4.931 2.269 1.122 5.543 hybrid contribution -2.856 1.725 -0.170 3.341 sum -7.787 3.994 0.952 8.803 Atomic orbital electron populations 1.23098 0.78073 1.04358 1.01332 1.86112 1.21553 1.26322 1.88915 1.18799 0.91898 0.84545 0.98913 1.21073 1.00283 0.91512 1.05524 1.21017 0.92877 0.98631 1.05882 1.18613 0.90737 0.84529 1.00299 1.86108 1.33757 1.10955 1.89220 1.22372 0.93057 0.84096 1.03992 1.19823 0.88935 0.82669 0.77248 1.90771 1.13879 1.85834 1.44903 1.45377 1.07623 1.02831 1.77343 1.62978 1.44186 0.99627 1.02172 1.22611 0.98767 0.97926 0.90954 1.21187 0.98324 0.94397 1.00041 1.26386 1.04834 1.00435 1.18026 0.79182 0.66805 0.64141 0.67203 1.26123 1.06009 1.13984 1.09764 1.26036 1.17257 1.06117 1.05849 1.28072 1.09957 1.08625 0.96602 1.19437 0.96736 0.89898 1.03772 1.25241 0.91314 1.13439 0.89276 1.86667 1.73766 1.42131 1.31551 0.84482 0.79720 0.72823 0.79602 1.17504 1.17859 1.17153 1.20231 0.92009 0.97403 1.03787 0.87924 0.92564 0.92557 0.84745 0.84888 0.88918 0.88821 0.78319 0.90221 0.93707 0.90802 0.90152 0.90710 0.90019 0.91048 0.90651 0.91224 0.90303 0.91309 0.91343 0.92689 0.88918 0.89969 0.78052 0.84082 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.68 10.50 -19.67 -0.21 -0.89 16 3 C 0.10 0.24 6.69 -39.24 -0.26 -0.03 16 4 C -0.17 -0.06 9.03 -39.45 -0.36 -0.41 16 5 C -0.17 0.01 9.03 -39.45 -0.36 -0.34 16 6 C 0.10 0.19 6.62 -39.25 -0.26 -0.07 16 7 O -0.29 -0.56 8.56 -39.61 -0.34 -0.89 16 8 C 0.05 -0.06 5.22 36.00 0.19 0.12 16 9 C 0.53 0.75 8.01 -10.99 -0.09 0.67 16 10 O -0.48 -3.08 16.83 -14.35 -0.24 -3.32 16 11 N -0.59 0.49 4.71 31.22 0.15 0.63 16 12 N -0.27 -0.03 4.15 -56.96 -0.24 -0.27 16 13 C 0.03 -0.03 5.38 -4.31 -0.02 -0.05 16 14 C -0.10 0.11 5.74 -26.44 -0.15 -0.05 16 15 C -0.41 0.89 5.04 37.64 0.19 1.08 16 16 Si 1.03 -2.82 11.99 -169.99 -2.04 -4.86 16 17 C -0.45 1.09 8.65 101.05 0.87 1.96 16 18 C -0.44 0.20 8.65 101.05 0.87 1.08 16 19 C -0.26 0.42 4.85 60.52 0.29 0.71 16 20 C -0.10 -0.28 5.28 -104.49 -0.55 -0.83 16 21 C -0.08 -0.25 2.33 36.01 0.08 -0.16 16 22 O -0.54 -2.14 12.65 -35.23 -0.45 -2.58 16 23 Si 1.01 2.32 25.74 -169.99 -4.38 -2.06 16 24 H -0.25 -0.69 6.73 56.52 0.38 -0.31 16 25 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 26 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 27 C -0.12 -0.34 8.59 -39.45 -0.34 -0.68 16 28 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 29 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 31 H 0.13 -0.27 6.29 -52.49 -0.33 -0.60 16 32 H 0.13 -0.41 6.29 -52.49 -0.33 -0.74 16 33 H 0.09 -0.35 7.65 -51.93 -0.40 -0.75 16 34 H 0.09 -0.37 7.67 -51.93 -0.40 -0.77 16 35 H 0.38 -1.51 8.83 -185.15 -1.63 -3.15 16 36 H 0.08 -0.05 8.03 -51.93 -0.42 -0.47 16 37 H 0.04 -0.10 7.78 -51.93 -0.40 -0.51 16 38 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.08 0.01 7.96 -51.93 -0.41 -0.40 16 40 H 0.07 -0.20 7.99 -51.93 -0.42 -0.61 16 41 H 0.08 -0.18 7.99 -51.93 -0.42 -0.60 16 42 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 43 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 44 H 0.07 -0.18 7.96 -51.93 -0.41 -0.60 16 45 H 0.08 0.09 7.96 -51.93 -0.41 -0.32 16 46 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 47 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 48 H 0.05 -0.16 7.92 -51.93 -0.41 -0.57 16 49 H 0.09 -0.09 7.99 -51.93 -0.41 -0.51 16 50 H 0.08 0.21 7.82 -51.93 -0.41 -0.19 16 51 H 0.37 0.89 8.60 45.56 0.39 1.28 16 52 H 0.14 0.33 4.89 -52.49 -0.26 0.08 16 LS Contribution 418.09 15.07 6.30 6.30 Total: 0.00 -9.08 418.09 -9.52 -18.60 By element: Atomic # 1 Polarization: -5.43 SS G_CDS: -9.19 Total: -14.62 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: 1.11 Total: 3.95 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -0.09 Total: 0.37 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -1.23 Total: -7.69 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -6.41 Total: -6.92 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -9.08 -9.52 -18.60 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.839 kcal (2) G-P(sol) polarization free energy of solvation -9.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds