Wall clock time and date at job start Sun Mar 7 2021 09:25:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35900 * 117.00090 * 2 1 4 4 C 1.38746 * 120.03036 * 0.02562 * 3 2 1 5 5 C 1.38196 * 120.05890 * 179.72197 * 4 3 2 6 6 C 1.38155 * 120.10490 * 0.51759 * 5 4 3 7 7 C 1.50701 * 119.96977 * 179.76352 * 6 5 4 8 8 O 1.42894 * 109.47221 * 254.71988 * 7 6 5 9 9 Si 1.86305 * 109.47205 * 14.72187 * 7 6 5 10 10 H 1.48493 * 109.47315 * 59.99984 * 9 7 6 11 11 H 1.48503 * 109.47100 * 179.97438 * 9 7 6 12 12 H 1.48504 * 109.46648 * 299.99718 * 9 7 6 13 13 C 1.38788 * 120.05563 * 359.48244 * 6 5 4 14 14 O 1.35902 * 120.02556 * 180.28044 * 13 6 5 15 15 C 1.42905 * 116.99540 * 180.02562 * 14 13 6 16 16 C 1.50707 * 109.46748 * 179.97438 * 15 14 13 17 17 O 1.21276 * 119.99681 * 0.02562 * 16 15 14 18 18 N 1.34773 * 119.99822 * 179.97438 * 16 15 14 19 19 N 1.36597 * 119.99784 * 174.99075 * 18 16 15 20 20 C 1.46362 * 110.99588 * 111.10642 * 19 18 16 21 21 C 1.52629 * 111.88710 * 203.19272 * 20 19 18 22 22 C 1.53920 * 109.31675 * 283.47592 * 21 20 19 23 23 Si 1.87526 * 106.84633 * 57.20651 * 22 21 20 24 24 C 1.86304 * 110.00231 * 196.90122 * 23 22 21 25 25 C 1.86300 * 110.00295 * 75.50396 * 23 22 21 26 26 C 1.47728 * 111.00375 * 235.45050 * 19 18 16 27 27 C 1.38610 * 119.94691 * 0.26003 * 13 6 5 28 28 H 1.08999 * 109.47152 * 300.00418 * 1 2 3 29 29 H 1.09005 * 109.47175 * 60.00191 * 1 2 3 30 30 H 1.08998 * 109.47129 * 180.02562 * 1 2 3 31 31 H 1.08007 * 119.96908 * 359.97438 * 4 3 2 32 32 H 1.07995 * 119.94800 * 180.27439 * 5 4 3 33 33 H 1.08999 * 109.47248 * 134.72196 * 7 6 5 34 34 H 0.96702 * 113.99888 * 59.99993 * 8 7 6 35 35 H 1.08995 * 109.47505 * 299.99697 * 15 14 13 36 36 H 1.09002 * 109.47154 * 60.00247 * 15 14 13 37 37 H 0.96997 * 120.00220 * 354.99761 * 18 16 15 38 38 H 1.08990 * 108.99722 * 323.81691 * 20 19 18 39 39 H 1.08998 * 108.99653 * 82.57973 * 20 19 18 40 40 H 1.09004 * 109.49580 * 163.52340 * 21 20 19 41 41 H 1.08999 * 109.52440 * 43.44901 * 21 20 19 42 42 H 1.08997 * 109.98021 * 297.87372 * 22 21 20 43 43 H 1.08997 * 110.05936 * 176.58112 * 22 21 20 44 44 H 1.08999 * 109.46898 * 177.27208 * 24 23 22 45 45 H 1.08994 * 109.47336 * 297.27477 * 24 23 22 46 46 H 1.09003 * 109.46779 * 57.27285 * 24 23 22 47 47 H 1.08996 * 109.46929 * 302.72924 * 25 23 22 48 48 H 1.09000 * 109.47108 * 62.72604 * 25 23 22 49 49 H 1.09006 * 109.47096 * 182.72612 * 25 23 22 50 50 H 1.08997 * 109.94653 * 294.89541 * 26 19 18 51 51 H 1.09007 * 109.94272 * 56.14486 * 26 19 18 52 52 H 1.08003 * 120.05434 * 179.97438 * 27 13 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 1.2909 2.3749 0.0005 5 6 1.9177 3.6065 0.0063 6 6 3.2972 3.6821 0.0008 7 6 3.9775 5.0268 0.0018 8 8 4.5039 5.2952 -1.2992 9 14 2.7438 6.3466 0.4570 10 1 2.1968 6.0677 1.8090 11 1 3.4144 7.6716 0.4586 12 1 1.6372 6.3524 -0.5333 13 6 4.0569 2.5206 0.0003 14 8 5.4139 2.5956 0.0006 15 6 6.1318 1.3600 -0.0005 16 6 7.6127 1.6397 -0.0006 17 8 8.0137 2.7842 0.0007 18 7 8.4914 0.6178 -0.0011 19 7 9.8302 0.8683 -0.1045 20 6 10.5208 0.5537 1.1471 21 6 11.8362 1.3165 1.2785 22 6 12.8989 0.6574 0.3810 23 14 12.2146 0.6623 -1.3649 24 6 13.1626 -0.5419 -2.4243 25 6 12.3263 2.3754 -2.0884 26 6 10.4201 0.1336 -1.2423 27 6 3.4306 1.2841 -0.0002 28 1 -0.3633 0.5139 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 0.2123 2.3184 0.0005 32 1 1.3282 4.5114 0.0112 33 1 4.7898 5.0225 0.7286 34 1 3.8355 5.3141 -1.9978 35 1 5.8700 0.7868 0.8888 36 1 5.8703 0.7887 -0.8912 37 1 8.1732 -0.2956 0.0718 38 1 9.8740 0.8148 1.9845 39 1 10.7264 -0.5162 1.1796 40 1 12.1695 1.2909 2.3160 41 1 11.6897 2.3513 0.9689 42 1 13.0788 -0.3668 0.7076 43 1 13.8266 1.2284 0.4189 44 1 12.7274 -0.5678 -3.4233 45 1 14.2039 -0.2266 -2.4897 46 1 13.1112 -1.5357 -1.9796 47 1 11.7892 3.0756 -1.4487 48 1 13.3725 2.6739 -2.1558 49 1 11.8826 2.3790 -3.0840 50 1 10.3600 -0.9398 -1.0631 51 1 9.8937 0.3881 -2.1622 52 1 4.0201 0.3791 -0.0010 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:25:38 Heat of formation + Delta-G solvation = -109.778543 kcal Electronic energy + Delta-G solvation = -31675.000619 eV Core-core repulsion = 27379.513197 eV Total energy + Delta-G solvation = -4295.487421 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 368.177 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.77782 -40.92080 -39.96631 -38.62436 -37.87627 -36.80243 -34.91838 -32.33766 -32.11674 -31.16212 -29.44040 -29.08128 -28.48149 -28.40483 -27.58554 -26.03515 -24.89530 -23.51251 -22.43609 -21.91270 -21.56683 -19.94964 -18.87793 -18.21670 -17.87278 -17.60382 -17.49104 -17.13496 -16.78609 -16.52946 -16.45806 -15.86790 -15.73425 -15.27455 -15.16510 -14.96983 -14.80108 -14.78798 -14.56670 -14.31257 -14.09377 -13.84588 -13.83751 -13.59370 -13.49905 -13.40224 -13.26783 -13.15074 -13.14590 -12.99728 -12.52871 -12.29897 -12.08444 -12.07406 -12.02181 -11.91562 -11.64023 -11.50672 -11.26774 -10.87750 -10.61976 -10.41436 -10.21233 -10.18023 -9.68552 -9.67247 -9.05341 0.22501 0.35300 1.13214 1.27628 1.48538 1.61031 1.61883 1.71351 1.79156 1.88353 2.01675 2.15662 2.46192 2.54522 2.60943 3.33256 3.57799 3.65755 3.71357 3.83578 3.90973 3.94995 3.97484 4.03339 4.04770 4.12326 4.14220 4.26978 4.32737 4.39294 4.41609 4.50416 4.52597 4.60966 4.64579 4.65437 4.70178 4.78723 4.80365 4.87696 4.93873 5.03934 5.06103 5.24796 5.25487 5.29569 5.37894 5.41757 5.46685 5.70232 5.75574 6.12452 6.26589 6.32295 6.45299 6.81084 7.53632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.239 4.239 5 C -0.048 4.048 6 C -0.184 4.184 7 C -0.065 4.065 8 O -0.530 6.530 9 Si 0.948 3.052 10 H -0.250 1.250 11 H -0.252 1.252 12 H -0.253 1.253 13 C 0.196 3.804 14 O -0.269 6.269 15 C 0.041 3.959 16 C 0.529 3.471 17 O -0.481 6.481 18 N -0.586 5.586 19 N -0.273 5.273 20 C 0.025 3.975 21 C -0.101 4.101 22 C -0.410 4.410 23 Si 1.034 2.966 24 C -0.450 4.450 25 C -0.444 4.444 26 C -0.260 4.260 27 C -0.247 4.247 28 H 0.059 0.941 29 H 0.059 0.941 30 H 0.103 0.897 31 H 0.134 0.866 32 H 0.134 0.866 33 H 0.118 0.882 34 H 0.369 0.631 35 H 0.094 0.906 36 H 0.096 0.904 37 H 0.379 0.621 38 H 0.079 0.921 39 H 0.044 0.956 40 H 0.073 0.927 41 H 0.080 0.920 42 H 0.074 0.926 43 H 0.081 0.919 44 H 0.070 0.930 45 H 0.074 0.926 46 H 0.069 0.931 47 H 0.078 0.922 48 H 0.068 0.932 49 H 0.067 0.933 50 H 0.055 0.945 51 H 0.092 0.908 52 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.101 -5.583 0.112 5.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.258 4.258 5 C -0.066 4.066 6 C -0.185 4.185 7 C -0.176 4.176 8 O -0.334 6.334 9 Si 0.771 3.229 10 H -0.174 1.174 11 H -0.176 1.176 12 H -0.178 1.178 13 C 0.149 3.851 14 O -0.180 6.180 15 C -0.039 4.039 16 C 0.313 3.687 17 O -0.350 6.350 18 N -0.333 5.333 19 N -0.089 5.089 20 C -0.102 4.102 21 C -0.139 4.139 22 C -0.497 4.497 23 Si 1.226 2.774 24 C -0.558 4.558 25 C -0.553 4.553 26 C -0.433 4.433 27 C -0.267 4.267 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.121 0.879 31 H 0.152 0.848 32 H 0.151 0.849 33 H 0.135 0.865 34 H 0.216 0.784 35 H 0.112 0.888 36 H 0.114 0.886 37 H 0.217 0.783 38 H 0.098 0.902 39 H 0.062 0.938 40 H 0.091 0.909 41 H 0.099 0.901 42 H 0.093 0.907 43 H 0.099 0.901 44 H 0.090 0.910 45 H 0.093 0.907 46 H 0.088 0.912 47 H 0.097 0.903 48 H 0.087 0.913 49 H 0.087 0.913 50 H 0.073 0.927 51 H 0.111 0.889 52 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -1.664 -3.587 0.590 3.998 hybrid contribution -0.911 -2.212 -0.189 2.399 sum -2.575 -5.798 0.401 6.357 Atomic orbital electron populations 1.23141 0.77645 1.04393 1.01758 1.86073 1.21984 1.26688 1.88035 1.18680 0.91474 0.84345 0.92743 1.21099 1.00412 0.91785 1.12474 1.20742 0.92779 0.97858 0.95187 1.19550 0.92639 0.94680 1.11648 1.24775 1.05929 0.97315 0.89576 1.86622 1.37284 1.93562 1.15952 0.85792 0.77385 0.78813 0.80947 1.17358 1.17577 1.17758 1.18363 0.81986 0.92335 0.92437 1.86264 1.14629 1.29470 1.87649 1.22444 0.90195 0.87091 1.04196 1.19796 0.86179 0.85390 0.77316 1.90783 1.79230 1.20371 1.44665 1.45369 1.02004 1.08350 1.77534 1.62981 0.88570 1.53842 1.03541 1.22600 0.96850 0.98956 0.91835 1.21184 0.91938 1.00441 1.00376 1.26382 1.03269 1.03340 1.16659 0.79189 0.63304 0.67532 0.67358 1.26120 1.08919 1.11015 1.09788 1.26037 1.04310 1.17955 1.06962 1.28085 1.19241 0.99890 0.96061 1.20401 0.92890 0.97389 1.15971 0.92259 0.92256 0.87893 0.84823 0.84886 0.86450 0.78445 0.88766 0.88592 0.78307 0.90205 0.93765 0.90863 0.90138 0.90731 0.90060 0.91048 0.90673 0.91226 0.90287 0.91325 0.91335 0.92686 0.88920 0.84379 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.37 10.49 -19.42 -0.20 -0.57 16 3 C 0.17 0.27 6.68 -39.24 -0.26 0.01 16 4 C -0.24 -0.15 9.04 -39.41 -0.36 -0.51 16 5 C -0.05 -0.04 8.65 -39.63 -0.34 -0.38 16 6 C -0.18 -0.41 5.28 -104.45 -0.55 -0.96 16 7 C -0.07 -0.15 2.37 36.01 0.09 -0.06 16 8 O -0.53 -1.75 12.88 -35.23 -0.45 -2.20 16 9 Si 0.95 0.69 25.48 -169.99 -4.33 -3.64 16 10 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 11 H -0.25 -0.59 7.11 56.52 0.40 -0.18 16 12 H -0.25 0.01 6.74 56.52 0.38 0.39 16 13 C 0.20 0.52 6.66 -39.24 -0.26 0.26 16 14 O -0.27 -0.99 9.00 -39.34 -0.35 -1.35 16 15 C 0.04 0.01 5.22 36.01 0.19 0.20 16 16 C 0.53 1.51 8.01 -10.98 -0.09 1.42 16 17 O -0.48 -3.84 16.83 -14.35 -0.24 -4.08 16 18 N -0.59 -0.16 4.71 31.22 0.15 -0.01 16 19 N -0.27 -0.28 4.15 -56.96 -0.24 -0.51 16 20 C 0.03 0.00 5.38 -4.31 -0.02 -0.03 16 21 C -0.10 0.03 5.74 -26.44 -0.15 -0.12 16 22 C -0.41 0.66 5.04 37.64 0.19 0.85 16 23 Si 1.03 -2.26 11.99 -169.99 -2.04 -4.30 16 24 C -0.45 0.90 8.65 101.05 0.87 1.78 16 25 C -0.44 -0.02 8.65 101.05 0.87 0.86 16 26 C -0.26 0.25 4.85 60.52 0.29 0.54 16 27 C -0.25 -0.37 8.97 -39.29 -0.35 -0.72 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 31 H 0.13 -0.20 6.29 -52.48 -0.33 -0.53 16 32 H 0.13 -0.11 4.87 -52.49 -0.26 -0.36 16 33 H 0.12 0.36 7.82 -51.93 -0.41 -0.05 16 34 H 0.37 -0.22 8.70 45.56 0.40 0.18 16 35 H 0.09 -0.24 7.66 -51.93 -0.40 -0.63 16 36 H 0.10 -0.20 7.66 -51.93 -0.40 -0.60 16 37 H 0.38 -1.11 8.83 -185.16 -1.63 -2.75 16 38 H 0.08 0.04 8.03 -51.93 -0.42 -0.38 16 39 H 0.04 -0.07 7.78 -51.93 -0.40 -0.47 16 40 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.08 0.07 7.96 -51.93 -0.41 -0.34 16 42 H 0.07 -0.16 7.99 -51.93 -0.42 -0.57 16 43 H 0.08 -0.14 7.99 -51.93 -0.42 -0.56 16 44 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 45 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 46 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 47 H 0.08 0.13 7.96 -51.93 -0.41 -0.28 16 48 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 49 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 50 H 0.05 -0.12 7.92 -51.93 -0.41 -0.54 16 51 H 0.09 -0.04 7.99 -51.92 -0.41 -0.46 16 52 H 0.14 -0.07 6.30 -52.48 -0.33 -0.40 16 LS Contribution 418.67 15.07 6.31 6.31 Total: 0.00 -10.15 418.67 -9.48 -19.63 By element: Atomic # 1 Polarization: -4.16 SS G_CDS: -9.19 Total: -13.35 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: 1.11 Total: 4.08 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: -0.09 Total: -0.53 kcal Atomic # 8 Polarization: -6.95 SS G_CDS: -1.25 Total: -8.20 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -6.37 Total: -7.95 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -10.15 -9.48 -19.63 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.146 kcal (2) G-P(sol) polarization free energy of solvation -10.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.632 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.779 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds