Wall clock time and date at job start Sun Mar 7 2021 09:29:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37644 * 125.67320 * 2 1 4 4 C 1.46680 * 126.22340 * 0.02562 * 3 2 1 5 5 O 1.21698 * 119.99757 * 186.94452 * 4 3 2 6 6 N 1.34775 * 119.99882 * 6.94181 * 4 3 2 7 7 N 1.36604 * 119.99515 * 175.35337 * 6 4 3 8 8 C 1.46352 * 111.00126 * 113.47010 * 7 6 4 9 9 C 1.52624 * 111.89427 * 156.80180 * 8 7 6 10 10 C 1.53928 * 109.31107 * 76.52008 * 9 8 7 11 11 Si 1.87527 * 106.85044 * 302.80147 * 10 9 8 12 12 C 1.86293 * 110.00184 * 163.09778 * 11 10 9 13 13 C 1.86295 * 109.99932 * 284.39805 * 11 10 9 14 14 C 1.47721 * 111.00052 * 349.12074 * 7 6 4 15 15 C 1.37875 * 107.54944 * 180.02562 * 3 2 1 16 16 C 1.39882 * 107.09431 * 0.02562 * 15 3 2 17 17 Br 1.89103 * 126.07433 * 179.97438 * 16 15 3 18 18 C 1.35506 * 107.85139 * 359.97438 * 16 15 3 19 19 C 1.50700 * 125.57183 * 180.25964 * 18 16 15 20 20 O 1.42894 * 109.47216 * 303.11902 * 19 18 16 21 21 Si 1.86301 * 109.46511 * 63.11445 * 19 18 16 22 22 H 1.48501 * 109.47348 * 63.67204 * 21 19 18 23 23 H 1.48502 * 109.47098 * 183.66817 * 21 19 18 24 24 H 1.48503 * 109.47641 * 303.66788 * 21 19 18 25 25 H 1.08998 * 109.47469 * 278.00727 * 1 2 3 26 26 H 1.08999 * 109.47270 * 38.01097 * 1 2 3 27 27 H 1.09006 * 109.47021 * 158.00656 * 1 2 3 28 28 H 0.96998 * 120.00260 * 355.35643 * 6 4 3 29 29 H 1.08998 * 108.99915 * 277.42349 * 8 7 6 30 30 H 1.09003 * 108.99562 * 36.26123 * 8 7 6 31 31 H 1.09003 * 109.49929 * 196.47557 * 9 8 7 32 32 H 1.09005 * 109.49532 * 316.57392 * 9 8 7 33 33 H 1.08999 * 109.97381 * 62.13221 * 10 9 8 34 34 H 1.08997 * 109.97622 * 183.36902 * 10 9 8 35 35 H 1.09003 * 109.47289 * 59.99799 * 12 11 10 36 36 H 1.09000 * 109.47421 * 179.97438 * 12 11 10 37 37 H 1.09006 * 109.47385 * 300.00051 * 12 11 10 38 38 H 1.09009 * 109.47045 * 60.00277 * 13 11 10 39 39 H 1.09003 * 109.47111 * 180.02562 * 13 11 10 40 40 H 1.08999 * 109.47800 * 300.00125 * 13 11 10 41 41 H 1.09003 * 109.94805 * 303.86097 * 14 7 6 42 42 H 1.08998 * 109.94939 * 65.11365 * 14 7 6 43 43 H 1.08002 * 126.45437 * 180.02562 * 15 3 2 44 44 H 1.08994 * 109.46911 * 183.11332 * 19 18 16 45 45 H 0.96700 * 114.00771 * 59.99684 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8119 2.5123 0.0005 5 8 2.6173 3.4158 -0.1270 6 7 0.5013 2.7928 0.1421 7 7 0.0872 4.0910 0.2380 8 6 -0.7110 4.4743 -0.9273 9 6 -1.6347 5.6505 -0.6225 10 6 -0.8123 6.9515 -0.6016 11 14 0.5367 6.7213 0.6805 12 6 1.8734 7.9955 0.4349 13 6 -0.1798 6.8723 2.3935 14 6 1.2360 5.0007 0.4245 15 6 3.5781 0.6893 -0.0006 16 6 3.5529 -0.7093 -0.0015 17 35 5.0611 -1.8501 -0.0033 18 6 2.2559 -1.1015 -0.0009 19 6 1.7714 -2.5285 0.0039 20 8 2.3161 -3.2203 -1.1215 21 14 2.3231 -3.3660 1.5740 22 1 1.6861 -2.7017 2.7395 23 1 1.9227 -4.7956 1.5395 24 1 3.7999 -3.2683 1.6948 25 1 -0.3634 0.1431 1.0176 26 1 -0.3634 0.8097 -0.6328 27 1 -0.3633 -0.9529 -0.3849 28 1 -0.1478 2.0728 0.1761 29 1 -0.0407 4.7512 -1.7410 30 1 -1.3147 3.6222 -1.2397 31 1 -2.4035 5.7183 -1.3922 32 1 -2.1046 5.5015 0.3497 33 1 -0.3686 7.1273 -1.5815 34 1 -1.4505 7.7910 -0.3261 35 1 1.4474 8.9935 0.5378 36 1 2.6522 7.8542 1.1842 37 1 2.3025 7.8846 -0.5610 38 1 -0.9442 6.1084 2.5362 39 1 0.6112 6.7376 3.1314 40 1 -0.6255 7.8595 2.5153 41 1 1.8110 4.6990 1.2999 42 1 1.8703 4.9852 -0.4617 43 1 4.4582 1.3152 -0.0004 44 1 0.6831 -2.5429 -0.0525 45 1 3.2826 -3.2471 -1.1368 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:29:44 Heat of formation + Delta-G solvation = 14.141342 kcal Electronic energy + Delta-G solvation = -26877.266639 eV Core-core repulsion = 23103.037017 eV Total energy + Delta-G solvation = -3774.229622 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 389.068 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -43.01902 -41.32507 -38.18134 -37.85145 -35.46899 -34.41790 -32.52892 -31.92558 -30.52661 -29.37473 -28.40279 -27.85616 -27.57987 -27.00398 -25.08892 -23.08410 -21.88352 -21.64330 -20.84412 -19.17203 -18.71766 -17.98465 -17.35237 -16.82001 -16.39589 -16.28599 -15.96521 -15.75277 -15.14842 -15.08297 -14.71063 -14.67885 -14.45348 -14.30782 -14.12154 -14.08593 -14.01239 -13.83646 -13.56637 -13.44068 -13.25308 -13.11701 -12.92901 -12.82155 -12.73982 -12.33322 -12.24774 -12.10615 -11.82154 -11.74386 -11.50585 -10.94582 -10.83216 -10.73568 -10.47701 -9.84386 -9.79030 -9.31971 -8.87652 0.10042 0.51372 0.83133 1.14507 1.37028 1.39437 1.46043 1.60626 1.81779 1.84954 1.90843 2.04869 2.16996 2.60845 3.05442 3.12324 3.24883 3.30742 3.57004 3.62918 3.76169 3.87706 4.03558 4.07603 4.18141 4.40772 4.47401 4.56634 4.62692 4.66729 4.73576 4.75209 4.77184 4.80666 4.84485 4.93988 5.15828 5.22110 5.30879 5.34877 5.44083 5.50761 5.56410 5.60770 5.69044 6.15929 6.24804 6.30034 7.26076 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 N -0.411 5.411 3 C -0.045 4.045 4 C 0.577 3.423 5 O -0.515 6.515 6 N -0.583 5.583 7 N -0.275 5.275 8 C 0.008 3.992 9 C -0.096 4.096 10 C -0.408 4.408 11 Si 0.998 3.002 12 C -0.446 4.446 13 C -0.439 4.439 14 C -0.238 4.238 15 C -0.067 4.067 16 C -0.181 4.181 17 Br -0.014 7.014 18 C 0.062 3.938 19 C -0.063 4.063 20 O -0.528 6.528 21 Si 0.921 3.079 22 H -0.246 1.246 23 H -0.238 1.238 24 H -0.212 1.212 25 H 0.096 0.904 26 H 0.091 0.909 27 H 0.107 0.893 28 H 0.413 0.587 29 H 0.047 0.953 30 H 0.074 0.926 31 H 0.072 0.928 32 H 0.077 0.923 33 H 0.074 0.926 34 H 0.079 0.921 35 H 0.071 0.929 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.073 0.927 39 H 0.067 0.933 40 H 0.066 0.934 41 H 0.093 0.907 42 H 0.095 0.905 43 H 0.162 0.838 44 H 0.120 0.880 45 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.866 -0.904 0.777 5.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 N -0.088 5.088 3 C -0.158 4.158 4 C 0.364 3.636 5 O -0.392 6.392 6 N -0.331 5.331 7 N -0.089 5.089 8 C -0.121 4.121 9 C -0.135 4.135 10 C -0.494 4.494 11 Si 1.192 2.808 12 C -0.554 4.554 13 C -0.547 4.547 14 C -0.411 4.411 15 C -0.094 4.094 16 C -0.267 4.267 17 Br 0.070 6.930 18 C -0.059 4.059 19 C -0.173 4.173 20 O -0.335 6.335 21 Si 0.738 3.262 22 H -0.169 1.169 23 H -0.160 1.160 24 H -0.133 1.133 25 H 0.114 0.886 26 H 0.109 0.891 27 H 0.125 0.875 28 H 0.258 0.742 29 H 0.065 0.935 30 H 0.093 0.907 31 H 0.091 0.909 32 H 0.095 0.905 33 H 0.093 0.907 34 H 0.098 0.902 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.088 0.912 38 H 0.092 0.908 39 H 0.087 0.913 40 H 0.085 0.915 41 H 0.111 0.889 42 H 0.113 0.887 43 H 0.180 0.820 44 H 0.138 0.862 45 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges -4.813 -1.120 1.712 5.229 hybrid contribution 0.164 0.236 -1.178 1.212 sum -4.649 -0.884 0.534 4.762 Atomic orbital electron populations 1.22526 0.76328 1.06008 1.04732 1.43901 1.06399 1.04772 1.53711 1.20647 0.90593 0.86363 1.18187 1.17539 0.82780 0.86349 0.76949 1.90928 1.54879 1.43534 1.49810 1.46147 1.07147 1.05149 1.74632 1.64542 1.19252 0.89702 1.35437 1.22789 0.97167 0.99498 0.92602 1.21140 0.97146 0.92214 1.03007 1.26350 1.11562 0.99727 1.11810 0.79765 0.66772 0.66247 0.68056 1.26058 1.12755 1.11719 1.04915 1.25994 1.06927 1.04362 1.17444 1.28159 0.96133 1.09784 1.07034 1.21154 0.95547 0.92153 1.00579 1.20743 0.91019 0.94775 1.20138 1.96658 1.36627 1.61731 1.97999 1.20858 0.89521 0.89955 1.05570 1.24747 1.03010 0.87545 1.01980 1.86537 1.26810 1.75493 1.44646 0.86012 0.84930 0.80918 0.74377 1.16878 1.16028 1.13305 0.88594 0.89052 0.87457 0.74163 0.93488 0.90738 0.90934 0.90460 0.90708 0.90241 0.91016 0.91047 0.91190 0.90768 0.91350 0.91452 0.88892 0.88721 0.82027 0.86219 0.77162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.21 9.32 59.85 0.56 0.34 16 2 N -0.41 0.21 3.16 -115.58 -0.37 -0.15 16 3 C -0.04 -0.08 6.88 -81.98 -0.56 -0.64 16 4 C 0.58 1.42 7.51 -12.85 -0.10 1.33 16 5 O -0.52 -2.67 12.35 5.19 0.06 -2.61 16 6 N -0.58 0.00 5.41 30.26 0.16 0.16 16 7 N -0.28 -0.07 5.00 -56.97 -0.29 -0.35 16 8 C 0.01 -0.01 5.38 -4.31 -0.02 -0.03 16 9 C -0.10 0.16 5.74 -26.44 -0.15 0.01 16 10 C -0.41 0.62 5.03 37.64 0.19 0.81 16 11 Si 1.00 -1.48 11.99 -169.99 -2.04 -3.52 16 12 C -0.45 0.18 8.65 101.05 0.87 1.05 16 13 C -0.44 0.33 8.65 101.05 0.87 1.20 16 14 C -0.24 -0.30 2.87 60.52 0.17 -0.12 16 15 C -0.07 -0.16 10.64 -39.10 -0.42 -0.58 16 16 C -0.18 -0.30 6.07 -39.94 -0.24 -0.54 16 17 Br -0.01 -0.01 28.71 -68.01 -1.95 -1.97 16 18 C 0.06 0.03 5.34 -81.90 -0.44 -0.41 16 19 C -0.06 0.06 2.82 36.01 0.10 0.16 16 20 O -0.53 -0.37 12.88 -35.23 -0.45 -0.83 16 21 Si 0.92 -0.73 26.79 -169.99 -4.55 -5.29 16 22 H -0.25 0.04 7.11 56.52 0.40 0.45 16 23 H -0.24 0.02 7.11 56.52 0.40 0.42 16 24 H -0.21 0.06 5.42 56.52 0.31 0.37 16 25 H 0.10 -0.61 8.08 -51.93 -0.42 -1.03 16 26 H 0.09 -0.52 6.06 -51.93 -0.31 -0.83 16 27 H 0.11 -0.68 6.60 -51.93 -0.34 -1.02 16 28 H 0.41 -1.15 4.50 -185.15 -0.83 -1.99 16 29 H 0.05 0.01 7.78 -51.93 -0.40 -0.39 16 30 H 0.07 -0.17 8.03 -51.93 -0.42 -0.58 16 31 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 33 H 0.07 -0.09 7.99 -51.93 -0.42 -0.51 16 34 H 0.08 -0.15 8.00 -51.93 -0.42 -0.56 16 35 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 36 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 37 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 38 H 0.07 -0.04 7.96 -51.92 -0.41 -0.45 16 39 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 40 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 41 H 0.09 0.25 7.09 -51.93 -0.37 -0.12 16 42 H 0.09 0.29 5.84 -52.29 -0.31 -0.01 16 43 H 0.16 0.35 8.06 -52.49 -0.42 -0.07 16 44 H 0.12 -0.40 6.29 -51.93 -0.33 -0.73 16 45 H 0.38 -0.15 6.30 45.56 0.29 0.14 16 LS Contribution 365.35 15.07 5.51 5.51 Total: 0.00 -6.79 365.35 -9.98 -16.77 By element: Atomic # 1 Polarization: -3.40 SS G_CDS: -6.91 Total: -10.31 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: 0.84 Total: 2.58 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -0.49 Total: -0.34 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.39 Total: -3.44 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: -6.59 Total: -8.80 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -1.95 Total: -1.97 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -6.79 -9.98 -16.77 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.909 kcal (2) G-P(sol) polarization free energy of solvation -6.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.124 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.768 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.141 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds