Wall clock time and date at job start Sun Mar 7 2021 09:29:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.36000 * 117.00131 * 2 1 4 4 C 1.38526 * 120.06786 * 359.97225 * 3 2 1 5 5 C 1.38289 * 119.99318 * 180.02562 * 4 3 2 6 6 C 1.50699 * 119.92396 * 180.02562 * 5 4 3 7 7 O 1.42898 * 109.47203 * 299.99820 * 6 5 4 8 8 Si 1.86300 * 109.47140 * 179.97438 * 6 5 4 9 9 H 1.48493 * 109.47094 * 59.99732 * 8 6 5 10 10 H 1.48504 * 109.47424 * 180.02562 * 8 6 5 11 11 H 1.48503 * 109.46877 * 299.99878 * 8 6 5 12 12 C 1.38211 * 120.14727 * 359.97438 * 5 4 3 13 13 C 1.38282 * 120.14855 * 359.77017 * 12 5 4 14 14 C 1.38530 * 119.99510 * 0.50701 * 13 12 5 15 15 O 1.35996 * 120.06732 * 179.74399 * 14 13 12 16 16 C 1.42901 * 117.00512 * 359.72329 * 15 14 13 17 17 C 1.50693 * 109.47147 * 180.02562 * 16 15 14 18 18 O 1.21277 * 120.00234 * 359.97438 * 17 16 15 19 19 N 1.34780 * 119.99760 * 180.02562 * 17 16 15 20 20 N 1.36601 * 119.99800 * 184.73330 * 19 17 16 21 21 C 1.46361 * 110.99934 * 111.06887 * 20 19 17 22 22 C 1.52625 * 111.88927 * 203.19515 * 21 20 19 23 23 C 1.53926 * 109.31315 * 283.47733 * 22 21 20 24 24 Si 1.87528 * 106.84964 * 57.20569 * 23 22 21 25 25 C 1.86305 * 110.00262 * 196.90363 * 24 23 22 26 26 C 1.86299 * 110.00030 * 75.50348 * 24 23 22 27 27 C 1.47731 * 111.00216 * 235.41915 * 20 19 17 28 28 H 1.09004 * 109.47295 * 300.00407 * 1 2 3 29 29 H 1.09007 * 109.46957 * 60.00321 * 1 2 3 30 30 H 1.08995 * 109.47170 * 179.97438 * 1 2 3 31 31 H 1.07988 * 120.00477 * 0.02562 * 4 3 2 32 32 H 1.09000 * 109.47435 * 59.99971 * 6 5 4 33 33 H 0.96700 * 114.00016 * 300.00183 * 7 6 5 34 34 H 1.08001 * 119.92304 * 180.02562 * 12 5 4 35 35 H 1.08000 * 120.00297 * 180.27552 * 13 12 5 36 36 H 1.09002 * 109.46784 * 60.00075 * 16 15 14 37 37 H 1.08997 * 109.47005 * 300.00676 * 16 15 14 38 38 H 0.97000 * 120.00294 * 5.01012 * 19 17 16 39 39 H 1.08994 * 108.99647 * 323.81752 * 21 20 19 40 40 H 1.09001 * 108.99634 * 82.57412 * 21 20 19 41 41 H 1.09002 * 109.49312 * 163.52884 * 22 21 20 42 42 H 1.08996 * 109.52398 * 43.44441 * 22 21 20 43 43 H 1.09001 * 109.97654 * 297.87248 * 23 22 21 44 44 H 1.08996 * 110.05486 * 176.58254 * 23 22 21 45 45 H 1.08997 * 109.46610 * 177.27529 * 25 24 23 46 46 H 1.09004 * 109.46830 * 297.27200 * 25 24 23 47 47 H 1.08998 * 109.47002 * 57.27167 * 25 24 23 48 48 H 1.08995 * 109.46985 * 302.72449 * 26 24 23 49 49 H 1.09000 * 109.47050 * 62.72805 * 26 24 23 50 50 H 1.09003 * 109.46966 * 182.72940 * 26 24 23 51 51 H 1.09006 * 109.94180 * 294.88792 * 27 20 19 52 52 H 1.08994 * 109.94603 * 56.14261 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2118 0.0000 4 6 1.2934 2.3744 -0.0006 5 6 1.9229 3.6058 -0.0011 6 6 1.1021 4.8696 -0.0012 7 8 0.2773 4.9020 -1.1677 8 14 2.2370 6.3471 -0.0011 9 1 3.0937 6.3132 -1.2135 10 1 1.4282 7.5926 -0.0006 11 1 3.0936 6.3132 1.2114 12 6 3.3030 3.6798 -0.0005 13 6 4.0606 2.5230 0.0054 14 6 3.4363 1.2863 0.0001 15 8 4.1800 0.1477 0.0007 16 6 5.6008 0.3007 0.0006 17 6 6.2523 -1.0582 0.0007 18 8 5.5674 -2.0591 0.0011 19 7 7.5961 -1.1612 0.0012 20 7 8.1871 -2.3889 -0.0965 21 6 8.8653 -2.5436 -1.3841 22 6 9.0327 -4.0117 -1.7663 23 6 10.1825 -4.6234 -0.9458 24 14 9.7512 -4.3765 0.8624 25 6 11.2697 -4.6067 1.9169 26 6 8.4292 -5.5857 1.3730 27 6 9.1142 -2.6213 1.0300 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0276 -0.0005 31 1 0.2149 2.3193 -0.0006 32 1 0.4736 4.8948 0.8890 33 1 0.7709 4.8822 -1.9990 34 1 3.7908 4.6434 -0.0005 35 1 5.1389 2.5836 0.0103 36 1 5.9070 0.8508 0.8904 37 1 5.9070 0.8501 -0.8895 38 1 8.1437 -0.3639 0.0749 39 1 8.2819 -2.0405 -2.1552 40 1 9.8491 -2.0779 -1.3252 41 1 9.2639 -4.0869 -2.8289 42 1 8.1089 -4.5505 -1.5559 43 1 11.1178 -4.1144 -1.1784 44 1 10.2733 -5.6873 -1.1651 45 1 11.0201 -4.4139 2.9602 46 1 11.6326 -5.6293 1.8131 47 1 12.0449 -3.9116 1.5943 48 1 7.5548 -5.4591 0.7347 49 1 8.8085 -6.6026 1.2723 50 1 8.1508 -5.4028 2.4109 51 1 9.9451 -1.9176 0.9788 52 1 8.5858 -2.5062 1.9763 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608516_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:29:55 Heat of formation + Delta-G solvation = -108.757935 kcal Electronic energy + Delta-G solvation = -31299.056867 eV Core-core repulsion = 27003.613702 eV Total energy + Delta-G solvation = -4295.443165 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 368.177 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.76188 -40.92150 -39.50617 -38.89033 -38.17348 -36.90092 -34.94191 -32.36074 -31.75412 -31.36673 -29.46335 -29.19637 -28.42179 -28.37971 -27.61758 -26.21562 -24.82217 -23.46266 -22.53444 -21.91040 -21.59062 -19.76640 -18.90760 -18.36894 -18.18196 -17.75024 -17.51594 -17.03415 -16.71766 -16.35125 -16.11950 -16.07407 -15.89000 -15.53947 -15.23155 -15.04926 -14.84238 -14.79645 -14.50090 -14.37456 -14.11419 -13.86412 -13.71295 -13.61795 -13.60934 -13.47124 -13.28032 -13.16456 -13.01177 -12.63541 -12.53126 -12.24265 -12.15619 -12.10653 -12.07146 -12.04867 -11.97646 -11.61366 -11.28034 -10.89668 -10.65997 -10.47406 -10.42874 -10.24380 -9.75939 -9.69856 -8.83100 0.19286 0.30887 1.11513 1.12333 1.39898 1.47444 1.58673 1.69746 1.77313 1.87228 1.87710 2.34458 2.42838 2.52555 2.58990 3.30215 3.40975 3.52626 3.64871 3.77872 3.81028 3.90697 3.94185 3.95123 4.09638 4.14964 4.26779 4.31042 4.32657 4.37063 4.47106 4.54724 4.58102 4.59167 4.62747 4.63850 4.67931 4.68763 4.76834 4.86022 4.92144 5.00622 5.01219 5.10935 5.22707 5.35302 5.37531 5.40147 5.56952 5.68508 5.73073 5.97630 6.23739 6.37741 6.51342 6.58026 7.51206 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.108 3.892 4 C -0.144 4.144 5 C -0.116 4.116 6 C -0.078 4.078 7 O -0.539 6.539 8 Si 0.952 3.048 9 H -0.251 1.251 10 H -0.254 1.254 11 H -0.251 1.251 12 C -0.122 4.122 13 C -0.169 4.169 14 C 0.105 3.895 15 O -0.275 6.275 16 C 0.043 3.957 17 C 0.529 3.471 18 O -0.482 6.482 19 N -0.586 5.586 20 N -0.274 5.274 21 C 0.025 3.975 22 C -0.101 4.101 23 C -0.410 4.410 24 Si 1.034 2.966 25 C -0.450 4.450 26 C -0.444 4.444 27 C -0.260 4.260 28 H 0.056 0.944 29 H 0.057 0.943 30 H 0.103 0.897 31 H 0.143 0.857 32 H 0.118 0.882 33 H 0.377 0.623 34 H 0.125 0.875 35 H 0.138 0.862 36 H 0.093 0.907 37 H 0.094 0.906 38 H 0.379 0.621 39 H 0.079 0.921 40 H 0.045 0.955 41 H 0.073 0.927 42 H 0.080 0.920 43 H 0.074 0.926 44 H 0.081 0.919 45 H 0.070 0.930 46 H 0.074 0.926 47 H 0.069 0.931 48 H 0.078 0.922 49 H 0.068 0.932 50 H 0.067 0.933 51 H 0.055 0.945 52 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.581 3.169 -0.152 5.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.062 3.938 4 C -0.163 4.163 5 C -0.116 4.116 6 C -0.189 4.189 7 O -0.344 6.344 8 Si 0.775 3.225 9 H -0.175 1.175 10 H -0.178 1.178 11 H -0.174 1.174 12 C -0.140 4.140 13 C -0.188 4.188 14 C 0.059 3.941 15 O -0.188 6.188 16 C -0.038 4.038 17 C 0.313 3.687 18 O -0.352 6.352 19 N -0.333 5.333 20 N -0.090 5.090 21 C -0.103 4.103 22 C -0.140 4.140 23 C -0.496 4.496 24 Si 1.226 2.774 25 C -0.558 4.558 26 C -0.553 4.553 27 C -0.432 4.432 28 H 0.075 0.925 29 H 0.076 0.924 30 H 0.121 0.879 31 H 0.161 0.839 32 H 0.136 0.864 33 H 0.224 0.776 34 H 0.143 0.857 35 H 0.156 0.844 36 H 0.111 0.889 37 H 0.112 0.888 38 H 0.217 0.783 39 H 0.098 0.902 40 H 0.063 0.937 41 H 0.092 0.908 42 H 0.098 0.902 43 H 0.093 0.907 44 H 0.100 0.900 45 H 0.090 0.910 46 H 0.093 0.907 47 H 0.088 0.912 48 H 0.097 0.903 49 H 0.087 0.913 50 H 0.087 0.913 51 H 0.073 0.927 52 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 3.727 2.482 0.303 4.488 hybrid contribution 1.179 1.042 -0.334 1.608 sum 4.906 3.524 -0.031 6.040 Atomic orbital electron populations 1.23137 0.78093 1.04416 1.01393 1.86258 1.21354 1.25282 1.88512 1.18283 0.88971 0.85620 1.00938 1.20928 1.00476 0.90260 1.04612 1.20009 0.93529 0.95364 1.02736 1.24955 1.00424 1.01525 0.91969 1.86509 1.35621 1.96914 1.15347 0.85653 0.77942 0.77194 0.81724 1.17479 1.17835 1.17434 1.20706 0.93068 0.98038 1.02227 1.20964 1.00389 0.90730 1.06723 1.18270 0.88338 0.85692 1.01775 1.86274 1.15920 1.27722 1.88836 1.22398 0.81351 0.96084 1.03926 1.19824 0.81242 0.90362 0.77288 1.90778 1.61892 1.37824 1.44657 1.45376 1.05750 1.04612 1.77531 1.62960 1.32129 1.11771 1.02144 1.22609 0.97636 0.99001 0.91012 1.21188 0.99259 0.93501 1.00018 1.26383 1.01097 1.04137 1.18033 0.79186 0.66347 0.64628 0.67201 1.26119 1.14884 1.05073 1.09764 1.26038 1.12915 1.10457 1.05866 1.28070 0.98870 1.19677 0.96630 0.92526 0.92439 0.87883 0.83945 0.86387 0.77590 0.85714 0.84423 0.88874 0.88829 0.78313 0.90230 0.93707 0.90823 0.90169 0.90710 0.90045 0.91047 0.90668 0.91222 0.90304 0.91331 0.91338 0.92696 0.88917 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.36 10.28 -34.22 -0.35 -1.71 16 3 C 0.11 0.38 6.70 -39.12 -0.26 0.12 16 4 C -0.14 -0.22 8.60 -39.46 -0.34 -0.56 16 5 C -0.12 -0.06 5.39 -104.61 -0.56 -0.63 16 6 C -0.08 0.05 2.82 36.01 0.10 0.15 16 7 O -0.54 0.01 12.77 -35.23 -0.45 -0.44 16 8 Si 0.95 -1.01 25.07 -169.99 -4.26 -5.27 16 9 H -0.25 0.25 7.11 56.52 0.40 0.65 16 10 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 11 H -0.25 0.16 7.11 56.52 0.40 0.56 16 12 C -0.12 -0.01 8.66 -39.58 -0.34 -0.35 16 13 C -0.17 -0.05 9.04 -39.46 -0.36 -0.41 16 14 C 0.11 0.32 6.70 -39.12 -0.26 0.06 16 15 O -0.28 -1.19 9.46 -47.35 -0.45 -1.64 16 16 C 0.04 0.00 5.22 36.00 0.19 0.19 16 17 C 0.53 1.49 8.01 -10.99 -0.09 1.40 16 18 O -0.48 -3.95 16.83 -14.35 -0.24 -4.19 16 19 N -0.59 -0.04 4.71 31.22 0.15 0.11 16 20 N -0.27 -0.24 4.15 -56.96 -0.24 -0.47 16 21 C 0.03 -0.01 5.38 -4.31 -0.02 -0.03 16 22 C -0.10 0.06 5.74 -26.44 -0.15 -0.09 16 23 C -0.41 0.73 5.04 37.64 0.19 0.92 16 24 Si 1.03 -2.39 11.99 -169.99 -2.04 -4.42 16 25 C -0.45 0.96 8.65 101.05 0.87 1.83 16 26 C -0.44 0.00 8.65 101.05 0.87 0.88 16 27 C -0.26 0.27 4.85 60.52 0.29 0.57 16 28 H 0.06 -0.05 7.66 -51.93 -0.40 -0.44 16 29 H 0.06 -0.04 7.66 -51.92 -0.40 -0.44 16 30 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.14 0.04 6.30 -52.49 -0.33 -0.29 16 32 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 33 H 0.38 -1.16 8.70 45.56 0.40 -0.77 16 34 H 0.13 -0.20 4.87 -52.49 -0.26 -0.45 16 35 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 36 H 0.09 -0.27 7.65 -51.93 -0.40 -0.67 16 37 H 0.09 -0.27 7.68 -51.93 -0.40 -0.67 16 38 H 0.38 -1.25 8.83 -185.15 -1.63 -2.89 16 39 H 0.08 0.00 8.03 -51.93 -0.42 -0.42 16 40 H 0.04 -0.08 7.78 -51.93 -0.40 -0.49 16 41 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 42 H 0.08 0.05 7.96 -51.93 -0.41 -0.36 16 43 H 0.07 -0.17 7.99 -51.93 -0.42 -0.59 16 44 H 0.08 -0.16 7.99 -51.93 -0.42 -0.57 16 45 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 46 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 47 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 48 H 0.08 0.13 7.96 -51.93 -0.41 -0.28 16 49 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16 50 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 51 H 0.05 -0.13 7.92 -51.93 -0.41 -0.55 16 52 H 0.09 -0.04 7.99 -51.93 -0.41 -0.45 16 LS Contribution 419.17 15.07 6.32 6.32 Total: 0.00 -10.76 419.17 -9.61 -20.37 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -9.17 Total: -13.70 kcal Atomic # 6 Polarization: 3.92 SS G_CDS: 1.12 Total: 5.05 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.09 Total: -0.37 kcal Atomic # 8 Polarization: -6.49 SS G_CDS: -1.49 Total: -7.98 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: -6.30 Total: -9.69 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -10.76 -9.61 -20.37 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608516_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.384 kcal (2) G-P(sol) polarization free energy of solvation -10.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.147 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.611 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds