Wall clock time and date at job start Sun Mar 7 2021 09:39:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53009 * 1 3 3 O 1.42898 * 109.47179 * 2 1 4 4 C 1.35902 * 117.00259 * 84.94553 * 3 2 1 5 5 C 1.38736 * 120.05205 * 174.27520 * 4 3 2 6 6 C 1.38144 * 119.93796 * 179.74650 * 5 4 3 7 7 C 1.38269 * 120.05757 * 0.50897 * 6 5 4 8 8 C 1.50700 * 119.94456 * 179.74463 * 7 6 5 9 9 O 1.42898 * 109.47136 * 245.02177 * 8 7 6 10 10 Si 1.86302 * 109.47075 * 5.02431 * 8 7 6 11 11 H 1.48500 * 109.47163 * 59.99834 * 10 8 7 12 12 H 1.48496 * 109.47158 * 179.97438 * 10 8 7 13 13 H 1.48504 * 109.46933 * 299.99729 * 10 8 7 14 14 C 1.38265 * 120.10961 * 359.76630 * 7 6 5 15 15 C 1.38144 * 120.05545 * 359.97438 * 14 7 6 16 16 C 1.50693 * 109.47140 * 239.99736 * 2 1 3 17 17 O 1.21304 * 120.00372 * 120.00048 * 16 2 1 18 18 N 1.34787 * 120.00015 * 300.00024 * 16 2 1 19 19 C 1.40762 * 119.99869 * 179.97438 * 18 16 2 20 20 C 1.35750 * 126.07641 * 179.97438 * 19 18 16 21 21 N 1.35813 * 107.56171 * 179.97438 * 20 19 18 22 22 C 1.46501 * 126.05652 * 179.97438 * 21 20 19 23 23 Si 1.86297 * 109.47143 * 90.00109 * 22 21 20 24 24 C 1.86293 * 109.46953 * 60.00371 * 23 22 21 25 25 C 1.86298 * 109.47145 * 300.00184 * 23 22 21 26 26 C 1.86302 * 109.47035 * 180.02562 * 23 22 21 27 27 N 1.40067 * 107.89360 * 0.23386 * 21 20 19 28 28 C 1.30832 * 108.36697 * 359.60867 * 27 21 20 29 29 H 1.09000 * 109.46974 * 300.00419 * 1 2 3 30 30 H 1.09001 * 109.46605 * 60.00348 * 1 2 3 31 31 H 1.08992 * 109.46520 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.46605 * 119.99652 * 2 1 3 33 33 H 1.07995 * 120.03264 * 0.02562 * 5 4 3 34 34 H 1.07999 * 119.97105 * 180.23681 * 6 5 4 35 35 H 1.09000 * 109.46983 * 125.01742 * 8 7 6 36 36 H 0.96698 * 113.99971 * 60.00077 * 9 8 7 37 37 H 1.08004 * 119.96780 * 179.97438 * 14 7 6 38 38 H 1.08001 * 120.02525 * 179.97438 * 15 14 7 39 39 H 0.96999 * 119.99586 * 0.02562 * 18 16 2 40 40 H 1.07996 * 126.22327 * 0.02562 * 20 19 18 41 41 H 1.09002 * 109.47014 * 330.00155 * 22 21 20 42 42 H 1.09001 * 109.47312 * 210.00749 * 22 21 20 43 43 H 1.09007 * 109.47383 * 299.99531 * 24 23 22 44 44 H 1.08997 * 109.47653 * 60.00219 * 24 23 22 45 45 H 1.09008 * 109.46995 * 180.02562 * 24 23 22 46 46 H 1.09003 * 109.46947 * 180.02562 * 25 23 22 47 47 H 1.09000 * 109.47569 * 300.00010 * 25 23 22 48 48 H 1.08998 * 109.47163 * 59.99836 * 25 23 22 49 49 H 1.09006 * 109.47226 * 299.99698 * 26 23 22 50 50 H 1.09002 * 109.47378 * 59.99889 * 26 23 22 51 51 H 1.09003 * 109.47200 * 180.02562 * 26 23 22 52 52 H 1.08002 * 125.83078 * 180.17394 * 28 27 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.1115 1.9646 1.2062 5 6 2.6777 3.2282 1.2929 6 6 2.7786 3.8557 2.5195 7 6 2.3255 3.2211 3.6614 8 6 2.4421 3.9057 4.9989 9 8 3.3412 3.1719 5.8327 10 14 3.0909 5.6352 4.7569 11 1 2.1565 6.3976 3.8903 12 1 3.2052 6.3100 6.0747 13 1 4.4276 5.5768 4.1125 14 6 1.7661 1.9595 3.5782 15 6 1.6580 1.3299 2.3533 16 6 2.0324 -0.7104 -1.2304 17 8 2.7298 -0.1210 -2.0289 18 7 1.7068 -2.0009 -1.4436 19 6 2.1756 -2.6643 -2.5932 20 6 1.9252 -3.9556 -2.9289 21 7 2.5567 -4.2029 -4.1056 22 6 2.5546 -5.4735 -4.8349 23 14 1.1182 -5.5065 -6.0207 24 6 1.2778 -4.0975 -7.2288 25 6 -0.4752 -5.3330 -5.0711 26 6 1.1151 -7.1227 -6.9476 27 7 3.2152 -3.0298 -4.4955 28 6 2.9840 -2.1087 -3.5956 29 1 -0.3633 0.5139 0.8900 30 1 -0.3632 0.5138 -0.8901 31 1 -0.3632 -1.0276 0.0005 32 1 1.8933 -0.5138 0.8901 33 1 3.0351 3.7227 0.4019 34 1 3.2158 4.8409 2.5871 35 1 1.4610 3.9486 5.4718 36 1 4.2355 3.0935 5.4734 37 1 1.4133 1.4657 4.4717 38 1 1.2214 0.3442 2.2890 39 1 1.1488 -2.4721 -0.8053 40 1 1.3311 -4.6583 -2.3636 41 1 2.4613 -6.2980 -4.1280 42 1 3.4869 -5.5751 -5.3904 43 1 1.2793 -3.1520 -6.6863 44 1 2.2100 -4.1990 -7.7845 45 1 0.4370 -4.1165 -7.9224 46 1 -1.3156 -5.3528 -5.7649 47 1 -0.5686 -6.1574 -4.3642 48 1 -0.4736 -4.3876 -4.5285 49 1 2.0474 -7.2246 -7.5032 50 1 1.0216 -7.9469 -6.2404 51 1 0.2749 -7.1418 -7.6417 52 1 3.3552 -1.0947 -3.6188 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:39:00 Heat of formation + Delta-G solvation = -29.833825 kcal Electronic energy + Delta-G solvation = -31392.073605 eV Core-core repulsion = 27096.856847 eV Total energy + Delta-G solvation = -4295.216758 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 377.173 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.36227 -41.62628 -40.41280 -39.02665 -37.17491 -35.93127 -33.96422 -33.15979 -32.08245 -31.48039 -30.26105 -29.69577 -28.59946 -28.46207 -27.23444 -26.64245 -25.45910 -24.21581 -22.97949 -22.37066 -21.89239 -20.85867 -19.54564 -18.72092 -18.36390 -17.95152 -17.08778 -16.92873 -16.66665 -16.42783 -16.35582 -16.15964 -15.66540 -15.48449 -15.26104 -15.04073 -14.93417 -14.52084 -14.39168 -14.36277 -14.33198 -14.13274 -13.96930 -13.86146 -13.72563 -13.58749 -13.52334 -13.43325 -13.34945 -13.26997 -13.18625 -12.96580 -12.26863 -12.22312 -12.16826 -12.06666 -12.06242 -11.67119 -11.53417 -11.37966 -11.06096 -10.95399 -10.77910 -10.40691 -10.04800 -10.03799 -9.20601 -8.62358 0.23540 0.34221 0.71026 1.14894 1.16729 1.31929 1.43901 1.50115 1.52041 1.55538 1.66659 1.92380 1.93055 2.13540 2.39269 2.45291 2.65410 3.33224 3.47668 3.51845 3.66101 3.67362 3.70673 3.82843 3.84933 3.85731 4.17409 4.22659 4.25971 4.39104 4.43668 4.46447 4.54238 4.56510 4.57299 4.59092 4.60410 4.61952 4.66184 4.72336 4.75510 4.78772 4.86977 4.98054 5.10186 5.18288 5.28812 5.30794 5.37776 5.47235 5.56014 5.64879 5.89269 6.00096 6.21777 6.35242 6.55012 6.78788 7.06396 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.071 3.929 3 O -0.282 6.282 4 C 0.136 3.864 5 C -0.140 4.140 6 C -0.084 4.084 7 C -0.158 4.158 8 C -0.075 4.075 9 O -0.540 6.540 10 Si 0.946 3.054 11 H -0.249 1.249 12 H -0.254 1.254 13 H -0.251 1.251 14 C -0.048 4.048 15 C -0.212 4.212 16 C 0.519 3.481 17 O -0.500 6.500 18 N -0.637 5.637 19 C -0.005 4.005 20 C 0.017 3.983 21 N -0.343 5.343 22 C -0.169 4.169 23 Si 1.019 2.981 24 C -0.447 4.447 25 C -0.450 4.450 26 C -0.450 4.450 27 N -0.280 5.280 28 C 0.047 3.953 29 H 0.080 0.920 30 H 0.078 0.922 31 H 0.080 0.920 32 H 0.104 0.896 33 H 0.137 0.863 34 H 0.128 0.872 35 H 0.117 0.883 36 H 0.376 0.624 37 H 0.131 0.869 38 H 0.132 0.868 39 H 0.410 0.590 40 H 0.177 0.823 41 H 0.099 0.901 42 H 0.105 0.895 43 H 0.071 0.929 44 H 0.071 0.929 45 H 0.069 0.931 46 H 0.074 0.926 47 H 0.070 0.930 48 H 0.070 0.930 49 H 0.072 0.928 50 H 0.071 0.929 51 H 0.075 0.925 52 H 0.204 0.796 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.233 -5.239 2.189 7.082 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.011 3.989 3 O -0.195 6.195 4 C 0.090 3.910 5 C -0.159 4.159 6 C -0.102 4.102 7 C -0.159 4.159 8 C -0.186 4.186 9 O -0.345 6.345 10 Si 0.769 3.231 11 H -0.173 1.173 12 H -0.178 1.178 13 H -0.175 1.175 14 C -0.066 4.066 15 C -0.230 4.230 16 C 0.304 3.696 17 O -0.373 6.373 18 N -0.285 5.285 19 C -0.110 4.110 20 C -0.132 4.132 21 N -0.126 5.126 22 C -0.335 4.335 23 Si 1.213 2.787 24 C -0.555 4.555 25 C -0.558 4.558 26 C -0.558 4.558 27 N -0.103 5.103 28 C -0.139 4.139 29 H 0.099 0.901 30 H 0.097 0.903 31 H 0.098 0.902 32 H 0.121 0.879 33 H 0.155 0.845 34 H 0.145 0.855 35 H 0.135 0.865 36 H 0.224 0.776 37 H 0.149 0.851 38 H 0.150 0.850 39 H 0.246 0.754 40 H 0.194 0.806 41 H 0.117 0.883 42 H 0.124 0.876 43 H 0.090 0.910 44 H 0.090 0.910 45 H 0.088 0.912 46 H 0.093 0.907 47 H 0.089 0.911 48 H 0.089 0.911 49 H 0.092 0.908 50 H 0.090 0.910 51 H 0.094 0.906 52 H 0.221 0.779 Dipole moment (debyes) X Y Z Total from point charges -3.266 -4.291 0.565 5.423 hybrid contribution -0.451 -0.746 1.033 1.352 sum -3.718 -5.038 1.598 6.461 Atomic orbital electron populations 1.22393 0.92159 1.03999 1.05121 1.22096 0.95908 0.83384 0.97498 1.86215 1.80938 1.25236 1.27082 1.19058 0.95138 0.92827 0.83966 1.20393 1.03112 0.93677 0.98706 1.20887 0.98231 0.99282 0.91772 1.20215 1.03625 0.96719 0.95293 1.24885 0.98382 1.05287 0.90013 1.86509 1.24082 1.76998 1.46926 0.85740 0.81004 0.75550 0.80835 1.17313 1.17811 1.17503 1.20795 0.95300 0.93571 0.96931 1.21332 1.07223 1.01820 0.92651 1.20072 0.80888 0.81277 0.87337 1.90663 1.35883 1.65302 1.45469 1.42548 1.52094 1.11155 1.22662 1.17602 1.08153 0.92423 0.92786 1.21858 1.03550 0.96476 0.91268 1.47998 1.38110 1.09896 1.16577 1.26971 1.17726 0.82482 1.06318 0.79383 0.65064 0.67890 0.66349 1.26074 1.04586 1.13817 1.11005 1.26124 1.16191 1.04668 1.08771 1.26098 1.05099 1.15949 1.08659 1.77480 1.17967 0.91390 1.23485 1.24480 0.98080 1.00521 0.90813 0.90092 0.90259 0.90166 0.87882 0.84520 0.85492 0.86548 0.77647 0.85084 0.85013 0.75442 0.80619 0.88273 0.87643 0.90996 0.91010 0.91205 0.90716 0.91114 0.91118 0.90845 0.90963 0.90554 0.77923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.52 9.07 37.16 0.34 0.86 16 2 C 0.07 -0.05 2.64 -27.88 -0.07 -0.12 16 3 O -0.28 -0.71 9.33 -39.34 -0.37 -1.08 16 4 C 0.14 0.22 6.60 -39.22 -0.26 -0.04 16 5 C -0.14 -0.22 9.99 -39.43 -0.39 -0.61 16 6 C -0.08 -0.05 8.66 -39.60 -0.34 -0.39 16 7 C -0.16 -0.03 5.35 -104.60 -0.56 -0.59 16 8 C -0.07 0.05 2.80 36.01 0.10 0.15 16 9 O -0.54 -0.06 12.83 -35.23 -0.45 -0.52 16 10 Si 0.95 -0.53 25.14 -169.99 -4.27 -4.81 16 11 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 12 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 13 H -0.25 0.08 7.04 56.52 0.40 0.48 16 14 C -0.05 0.00 9.68 -39.61 -0.38 -0.38 16 15 C -0.21 0.05 8.24 -39.44 -0.33 -0.28 16 16 C 0.52 0.81 7.20 -10.98 -0.08 0.73 16 17 O -0.50 -2.90 13.66 -14.37 -0.20 -3.10 16 18 N -0.64 0.56 5.37 -10.04 -0.05 0.50 16 19 C -0.01 -0.01 6.90 -83.89 -0.58 -0.59 16 20 C 0.02 -0.01 11.44 -16.68 -0.19 -0.20 16 21 N -0.34 -0.31 3.01 -9.17 -0.03 -0.34 16 22 C -0.17 0.36 5.59 59.85 0.33 0.69 16 23 Si 1.02 -3.31 12.79 -169.99 -2.17 -5.48 16 24 C -0.45 0.13 8.65 101.05 0.87 1.00 16 25 C -0.45 1.19 8.65 101.05 0.87 2.06 16 26 C -0.45 1.38 8.65 101.05 0.87 2.25 16 27 N -0.28 -1.16 12.56 30.70 0.39 -0.77 16 28 C 0.05 0.20 10.84 -17.22 -0.19 0.01 16 29 H 0.08 -0.26 6.91 -51.93 -0.36 -0.62 16 30 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.08 -0.44 7.56 -51.93 -0.39 -0.83 16 32 H 0.10 -0.31 6.31 -51.93 -0.33 -0.64 16 33 H 0.14 0.13 8.06 -52.49 -0.42 -0.29 16 34 H 0.13 -0.09 4.86 -52.49 -0.25 -0.34 16 35 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 36 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 37 H 0.13 -0.17 8.06 -52.48 -0.42 -0.59 16 38 H 0.13 -0.35 5.43 -52.49 -0.28 -0.64 16 39 H 0.41 -1.96 8.24 -40.82 -0.34 -2.30 16 40 H 0.18 -0.76 8.06 -52.49 -0.42 -1.18 16 41 H 0.10 -0.43 7.96 -51.93 -0.41 -0.85 16 42 H 0.11 -0.20 7.96 -51.93 -0.41 -0.62 16 43 H 0.07 0.12 7.96 -51.93 -0.41 -0.29 16 44 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 45 H 0.07 -0.05 7.96 -51.92 -0.41 -0.46 16 46 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 47 H 0.07 -0.25 7.96 -51.93 -0.41 -0.66 16 48 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 49 H 0.07 -0.21 7.96 -51.93 -0.41 -0.63 16 50 H 0.07 -0.26 7.96 -51.93 -0.41 -0.67 16 51 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 52 H 0.20 1.07 5.92 -52.49 -0.31 0.76 16 LS Contribution 428.71 15.07 6.46 6.46 Total: 0.00 -10.37 428.71 -8.00 -18.36 By element: Atomic # 1 Polarization: -6.45 SS G_CDS: -7.32 Total: -13.78 kcal Atomic # 6 Polarization: 4.52 SS G_CDS: 0.02 Total: 4.55 kcal Atomic # 7 Polarization: -0.91 SS G_CDS: 0.30 Total: -0.61 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -1.02 Total: -4.70 kcal Atomic # 14 Polarization: -3.84 SS G_CDS: -6.45 Total: -10.29 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -10.37 -8.00 -18.36 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.469 kcal (2) G-P(sol) polarization free energy of solvation -10.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.998 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds