Wall clock time and date at job start Sun Mar 7 2021 09:46:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.35449 * 125.56867 * 2 1 4 4 C 1.50704 * 126.06193 * 359.97438 * 3 2 1 5 5 O 1.42899 * 109.46862 * 123.27482 * 4 3 2 6 6 Si 1.86299 * 109.46801 * 243.27402 * 4 3 2 7 7 H 1.48504 * 109.46982 * 174.29740 * 6 4 3 8 8 H 1.48492 * 109.47277 * 294.30007 * 6 4 3 9 9 H 1.48496 * 109.47355 * 54.30383 * 6 4 3 10 10 C 1.39837 * 107.86679 * 180.02562 * 3 2 1 11 11 C 1.50699 * 126.45488 * 180.02562 * 10 3 2 12 12 C 1.37876 * 107.09037 * 0.02562 * 10 3 2 13 13 C 1.46664 * 126.23413 * 180.02562 * 12 10 3 14 14 O 1.21717 * 120.00399 * 359.97438 * 13 12 10 15 15 N 1.34780 * 119.99778 * 179.97438 * 13 12 10 16 16 C 1.40717 * 119.99974 * 179.72075 * 15 13 12 17 17 C 1.35765 * 126.08210 * 180.27733 * 16 15 13 18 18 N 1.35841 * 107.55916 * 179.97438 * 17 16 15 19 19 C 1.46494 * 126.05513 * 180.02562 * 18 17 16 20 20 Si 1.86305 * 109.46794 * 90.00127 * 19 18 17 21 21 C 1.86303 * 109.47456 * 60.00078 * 20 19 18 22 22 C 1.86302 * 109.46985 * 180.02562 * 20 19 18 23 23 C 1.86300 * 109.47301 * 299.99713 * 20 19 18 24 24 N 1.40072 * 107.89032 * 359.97438 * 18 17 16 25 25 C 1.30834 * 108.37366 * 359.74097 * 24 18 17 26 26 N 1.35560 * 125.56542 * 180.33572 * 2 1 3 27 27 H 1.08996 * 109.47670 * 84.69628 * 1 2 3 28 28 H 1.09007 * 109.47247 * 204.69944 * 1 2 3 29 29 H 1.09002 * 109.47385 * 324.69254 * 1 2 3 30 30 H 1.09004 * 109.47330 * 3.27415 * 4 3 2 31 31 H 0.96696 * 113.99794 * 179.97438 * 5 4 3 32 32 H 1.08999 * 109.47249 * 270.00199 * 11 10 3 33 33 H 1.08997 * 109.47018 * 30.00523 * 11 10 3 34 34 H 1.09005 * 109.47126 * 150.00419 * 11 10 3 35 35 H 0.96999 * 120.00177 * 0.02562 * 15 13 12 36 36 H 1.07997 * 126.21981 * 359.95395 * 17 16 15 37 37 H 1.09000 * 109.47608 * 209.99717 * 19 18 17 38 38 H 1.08992 * 109.47328 * 330.00282 * 19 18 17 39 39 H 1.09003 * 109.46536 * 59.99576 * 21 20 19 40 40 H 1.08994 * 109.47209 * 179.97438 * 21 20 19 41 41 H 1.09003 * 109.46830 * 300.00015 * 21 20 19 42 42 H 1.09001 * 109.47457 * 59.99864 * 22 20 19 43 43 H 1.08999 * 109.47087 * 180.02562 * 22 20 19 44 44 H 1.09008 * 109.47145 * 299.99765 * 22 20 19 45 45 H 1.09003 * 109.46869 * 60.00056 * 23 20 19 46 46 H 1.08999 * 109.47029 * 179.97438 * 23 20 19 47 47 H 1.08995 * 109.47574 * 300.00561 * 23 20 19 48 48 H 1.08002 * 125.83234 * 180.26615 * 25 24 18 49 49 H 0.97001 * 125.67839 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5320 -0.0005 5 8 2.3709 3.2173 1.1259 6 14 2.3745 3.3698 -1.5694 7 1 1.7916 4.7341 -1.6346 8 1 3.8564 3.4634 -1.5834 9 1 1.9173 2.5799 -2.7407 10 6 3.6270 0.6766 -0.0006 11 6 4.8486 1.5590 -0.0003 12 6 3.6123 -0.7021 -0.0015 13 6 4.7860 -1.5816 -0.0019 14 8 5.9051 -1.1031 -0.0018 15 7 4.6253 -2.9198 -0.0023 16 6 5.7513 -3.7636 -0.0086 17 6 5.7332 -5.1212 -0.0150 18 7 7.0227 -5.5483 -0.0202 19 6 7.4688 -6.9436 -0.0285 20 14 7.6539 -7.5258 -1.7885 21 6 8.9117 -6.4665 -2.6641 22 6 8.2205 -9.3006 -1.7991 23 6 6.0139 -7.3931 -2.6623 24 7 7.8503 -4.4182 -0.0174 25 6 7.0922 -3.3518 -0.0164 26 7 2.2954 -1.1027 -0.0065 27 1 -0.3634 0.0950 -1.0232 28 1 -0.3634 -0.9337 0.4294 29 1 -0.3634 0.8386 0.5940 30 1 0.7316 2.5536 0.0577 31 1 2.1072 4.1454 1.1892 32 1 5.1429 1.7725 -1.0278 33 1 4.6221 2.4928 0.5143 34 1 5.6644 1.0499 0.5130 35 1 3.7334 -3.3012 -0.0028 36 1 4.8534 -5.7476 -0.0156 37 1 8.4283 -7.0214 0.4827 38 1 6.7329 -7.5634 0.4837 39 1 9.8712 -6.5443 -2.1528 40 1 9.0202 -6.8075 -3.6937 41 1 8.5797 -5.4283 -2.6579 42 1 7.4843 -9.9201 -1.2870 43 1 8.3292 -9.6411 -2.8288 44 1 9.1800 -9.3788 -1.2877 45 1 5.6819 -6.3548 -2.6561 46 1 6.1223 -7.7333 -3.6922 47 1 5.2780 -8.0128 -2.1501 48 1 7.4394 -2.3292 -0.0184 49 1 1.9835 -2.0212 -0.0122 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:46:45 Heat of formation + Delta-G solvation = 11.212607 kcal Electronic energy + Delta-G solvation = -28659.062328 eV Core-core repulsion = 24747.107898 eV Total energy + Delta-G solvation = -3911.954430 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 350.169 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.66899 -42.07722 -39.93434 -37.61981 -35.90266 -33.75565 -33.67164 -32.96939 -30.43929 -29.69955 -29.19245 -28.59416 -28.44697 -27.74514 -26.80667 -26.00939 -23.17635 -22.25057 -21.52530 -20.43561 -19.93162 -19.07864 -18.35378 -18.22393 -16.84728 -16.66924 -16.54646 -16.18100 -15.81930 -15.29804 -15.19176 -15.04317 -14.74014 -14.47078 -14.35947 -14.31615 -14.13045 -13.97680 -13.94182 -13.86375 -13.76675 -13.69133 -13.53465 -13.41993 -13.25315 -13.22438 -13.16862 -13.02182 -12.48952 -12.36528 -12.14829 -12.09715 -11.62624 -11.53089 -11.32770 -11.04473 -10.93475 -10.76584 -10.45965 -9.99079 -9.40092 -9.02083 -8.49337 0.37021 0.87029 1.17395 1.30728 1.48421 1.51677 1.61772 1.67412 1.72991 1.85013 1.93851 1.98588 2.15002 2.23667 2.41327 2.57902 3.55063 3.67165 3.77367 3.80008 3.90415 4.05088 4.18073 4.29341 4.35697 4.45043 4.48843 4.54257 4.55447 4.57774 4.60318 4.61747 4.63392 4.75763 4.77474 4.78349 4.81179 4.82655 5.04245 5.16065 5.18843 5.31931 5.38963 5.43746 5.51447 5.58130 5.78938 5.95889 6.00147 6.06029 6.31451 6.47283 6.74444 6.85248 7.20749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.081 3.919 3 C -0.173 4.173 4 C -0.037 4.037 5 O -0.543 6.543 6 Si 0.934 3.066 7 H -0.258 1.258 8 H -0.239 1.239 9 H -0.254 1.254 10 C -0.036 4.036 11 C -0.101 4.101 12 C -0.066 4.066 13 C 0.594 3.406 14 O -0.511 6.511 15 N -0.646 5.646 16 C -0.001 4.001 17 C 0.012 3.988 18 N -0.344 5.344 19 C -0.168 4.168 20 Si 1.019 2.981 21 C -0.446 4.446 22 C -0.450 4.450 23 C -0.450 4.450 24 N -0.281 5.281 25 C 0.049 3.951 26 N -0.538 5.538 27 H 0.081 0.919 28 H 0.070 0.930 29 H 0.088 0.912 30 H 0.069 0.931 31 H 0.376 0.624 32 H 0.067 0.933 33 H 0.076 0.924 34 H 0.082 0.918 35 H 0.402 0.598 36 H 0.174 0.826 37 H 0.105 0.895 38 H 0.098 0.902 39 H 0.071 0.929 40 H 0.068 0.932 41 H 0.071 0.929 42 H 0.071 0.929 43 H 0.075 0.925 44 H 0.072 0.928 45 H 0.069 0.931 46 H 0.073 0.927 47 H 0.069 0.931 48 H 0.206 0.794 49 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.058 -3.654 -1.135 8.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.037 4.037 3 C -0.180 4.180 4 C -0.148 4.148 5 O -0.348 6.348 6 Si 0.755 3.245 7 H -0.182 1.182 8 H -0.161 1.161 9 H -0.177 1.177 10 C -0.045 4.045 11 C -0.158 4.158 12 C -0.177 4.177 13 C 0.384 3.616 14 O -0.387 6.387 15 N -0.290 5.290 16 C -0.106 4.106 17 C -0.136 4.136 18 N -0.127 5.127 19 C -0.334 4.334 20 Si 1.213 2.787 21 C -0.554 4.554 22 C -0.558 4.558 23 C -0.558 4.558 24 N -0.104 5.104 25 C -0.137 4.137 26 N -0.136 5.136 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.107 0.893 30 H 0.087 0.913 31 H 0.223 0.777 32 H 0.086 0.914 33 H 0.095 0.905 34 H 0.101 0.899 35 H 0.236 0.764 36 H 0.191 0.809 37 H 0.123 0.877 38 H 0.116 0.884 39 H 0.090 0.910 40 H 0.088 0.912 41 H 0.090 0.910 42 H 0.090 0.910 43 H 0.094 0.906 44 H 0.092 0.908 45 H 0.088 0.912 46 H 0.093 0.907 47 H 0.088 0.912 48 H 0.222 0.778 49 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -4.475 -4.205 -1.730 6.379 hybrid contribution -2.105 -0.240 0.466 2.169 sum -6.580 -4.444 -1.264 8.040 Atomic orbital electron populations 1.20519 0.87250 1.04008 1.03611 1.20212 0.93527 0.85460 1.04525 1.18399 0.92423 0.92732 1.14426 1.23897 0.99348 0.92539 0.99036 1.86543 1.74322 1.27321 1.46616 0.85991 0.82728 0.79147 0.76639 1.18169 1.16142 1.17708 1.19777 0.94997 0.90714 0.99001 1.20571 0.94279 0.98622 1.02350 1.19847 0.82473 0.93843 1.21544 1.16919 0.87781 0.80388 0.76540 1.90722 1.23912 1.74514 1.49511 1.42605 1.07336 1.05168 1.73933 1.17610 0.88120 0.88858 1.15967 1.21832 0.89464 0.93738 1.08603 1.47969 1.03074 1.05596 1.56047 1.26948 1.05049 0.79422 1.22013 0.79380 0.68207 0.66913 0.64168 1.26067 1.11742 1.09973 1.07651 1.26098 1.06255 1.18354 1.05093 1.26127 1.16601 1.04668 1.08358 1.77468 1.18064 0.91071 1.23748 1.24499 0.89437 0.99443 1.00368 1.41757 1.05317 1.08252 1.58278 0.90011 0.91115 0.89316 0.91341 0.77687 0.91426 0.90509 0.89885 0.76440 0.80854 0.87673 0.88367 0.91005 0.91235 0.90964 0.90992 0.90576 0.90841 0.91152 0.90742 0.91166 0.77757 0.74695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.33 9.96 36.00 0.36 0.68 16 2 C 0.08 -0.02 7.13 -81.94 -0.58 -0.60 16 3 C -0.17 -0.33 4.52 -105.02 -0.47 -0.80 16 4 C -0.04 0.00 2.78 36.01 0.10 0.10 16 5 O -0.54 -0.33 11.71 -35.23 -0.41 -0.74 16 6 Si 0.93 0.40 26.77 -169.99 -4.55 -4.15 16 7 H -0.26 -0.06 7.11 56.52 0.40 0.35 16 8 H -0.24 -0.45 6.09 56.52 0.34 -0.11 16 9 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 10 C -0.04 -0.13 5.86 -104.16 -0.61 -0.74 16 11 C -0.10 -0.39 8.04 36.01 0.29 -0.10 16 12 C -0.07 -0.16 7.05 -81.99 -0.58 -0.74 16 13 C 0.59 1.95 7.76 -12.86 -0.10 1.85 16 14 O -0.51 -3.11 11.95 5.17 0.06 -3.05 16 15 N -0.65 -0.43 5.47 -11.22 -0.06 -0.49 16 16 C 0.00 0.00 6.90 -83.90 -0.58 -0.58 16 17 C 0.01 0.00 11.44 -16.66 -0.19 -0.19 16 18 N -0.34 -0.50 3.01 -9.17 -0.03 -0.53 16 19 C -0.17 0.28 5.59 59.84 0.33 0.61 16 20 Si 1.02 -2.92 12.79 -169.99 -2.17 -5.10 16 21 C -0.45 -0.01 8.65 101.05 0.87 0.86 16 22 C -0.45 1.24 8.65 101.05 0.87 2.11 16 23 C -0.45 0.98 8.65 101.05 0.87 1.86 16 24 N -0.28 -1.29 12.56 30.71 0.39 -0.90 16 25 C 0.05 0.23 10.84 -17.21 -0.19 0.04 16 26 N -0.54 0.47 5.99 -5.70 -0.03 0.43 16 27 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 28 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 29 H 0.09 -0.32 7.29 -51.93 -0.38 -0.70 16 30 H 0.07 -0.15 6.66 -51.93 -0.35 -0.50 16 31 H 0.38 -1.44 8.74 45.56 0.40 -1.04 16 32 H 0.07 0.24 7.58 -51.93 -0.39 -0.15 16 33 H 0.08 0.26 6.69 -51.93 -0.35 -0.09 16 34 H 0.08 0.41 6.48 -51.93 -0.34 0.07 16 35 H 0.40 -1.21 7.95 -40.82 -0.32 -1.53 16 36 H 0.17 -0.60 8.06 -52.49 -0.42 -1.02 16 37 H 0.10 -0.16 7.96 -51.93 -0.41 -0.57 16 38 H 0.10 -0.38 7.96 -51.93 -0.41 -0.79 16 39 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 40 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 41 H 0.07 0.15 7.96 -51.93 -0.41 -0.27 16 42 H 0.07 -0.23 7.96 -51.93 -0.41 -0.65 16 43 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 44 H 0.07 -0.19 7.96 -51.92 -0.41 -0.61 16 45 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 46 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 47 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 48 H 0.21 1.13 5.91 -52.49 -0.31 0.82 16 49 H 0.42 -1.84 8.19 -40.82 -0.33 -2.18 16 LS Contribution 401.82 15.07 6.06 6.06 Total: 0.00 -10.29 401.82 -7.40 -17.68 By element: Atomic # 1 Polarization: -6.54 SS G_CDS: -7.04 Total: -13.59 kcal Atomic # 6 Polarization: 3.97 SS G_CDS: 0.40 Total: 4.38 kcal Atomic # 7 Polarization: -1.75 SS G_CDS: 0.26 Total: -1.49 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.35 Total: -3.79 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: -6.72 Total: -9.25 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -10.29 -7.40 -17.68 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.897 kcal (2) G-P(sol) polarization free energy of solvation -10.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.684 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds