Wall clock time and date at job start Sun Mar 7 2021 10:13:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86296 * 1 3 3 C 1.86300 * 109.47099 * 2 1 4 4 C 1.86302 * 109.47310 * 239.99782 * 2 1 3 5 5 C 1.86301 * 109.46950 * 119.99796 * 2 1 3 6 6 N 1.46496 * 109.47207 * 60.00380 * 5 2 1 7 7 C 1.35821 * 126.05725 * 89.99467 * 6 5 2 8 8 C 1.35774 * 107.56249 * 180.02562 * 7 6 5 9 9 N 1.40706 * 126.08402 * 179.97438 * 8 7 6 10 10 C 1.34770 * 120.00066 * 180.02562 * 9 8 7 11 11 O 1.21598 * 120.00068 * 359.97438 * 10 9 8 12 12 C 1.47684 * 120.00395 * 179.97438 * 10 9 8 13 13 C 1.39625 * 120.14865 * 359.97438 * 12 10 9 14 14 C 1.38114 * 119.84879 * 180.02562 * 13 12 10 15 15 F 1.35092 * 119.92020 * 179.97438 * 14 13 12 16 16 C 1.38618 * 120.16603 * 0.02562 * 14 13 12 17 17 C 1.50695 * 119.84307 * 179.97438 * 16 14 13 18 18 O 1.42901 * 109.46998 * 74.97975 * 17 16 14 19 19 Si 1.86294 * 109.47125 * 314.98020 * 17 16 14 20 20 H 1.48500 * 109.47358 * 60.00360 * 19 17 16 21 21 H 1.48501 * 109.47141 * 180.02562 * 19 17 16 22 22 H 1.48497 * 109.47351 * 299.99987 * 19 17 16 23 23 C 1.38238 * 120.31200 * 359.95859 * 16 14 13 24 24 C 1.38261 * 120.14778 * 0.04450 * 23 16 14 25 25 F 1.35101 * 120.08351 * 179.97438 * 24 23 16 26 26 C 1.40273 * 107.83262 * 0.24416 * 8 7 6 27 27 N 1.30830 * 108.33496 * 359.58991 * 26 8 7 28 28 H 1.09002 * 109.47616 * 300.00481 * 1 2 3 29 29 H 1.09003 * 109.47106 * 59.99970 * 1 2 3 30 30 H 1.08999 * 109.47089 * 179.97438 * 1 2 3 31 31 H 1.09007 * 109.47185 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47203 * 299.99437 * 3 2 1 33 33 H 1.08999 * 109.47388 * 60.00072 * 3 2 1 34 34 H 1.09000 * 109.46786 * 300.00423 * 4 2 1 35 35 H 1.09003 * 109.46834 * 60.00081 * 4 2 1 36 36 H 1.08999 * 109.46981 * 179.97438 * 4 2 1 37 37 H 1.08999 * 109.47301 * 299.99783 * 5 2 1 38 38 H 1.09007 * 109.46908 * 180.02562 * 5 2 1 39 39 H 1.08001 * 126.22072 * 0.02729 * 7 6 5 40 40 H 0.97004 * 119.99840 * 359.97438 * 9 8 7 41 41 H 1.07993 * 120.07566 * 359.74455 * 13 12 10 42 42 H 1.09004 * 109.46904 * 194.97899 * 17 16 14 43 43 H 0.96696 * 114.00451 * 300.00063 * 18 17 16 44 44 H 1.07998 * 119.92305 * 180.02562 * 23 16 14 45 45 H 1.07992 * 125.82767 * 179.75853 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4839 -0.8782 1.5212 6 7 1.9957 -2.2594 1.5212 7 6 2.6257 -3.3300 0.9722 8 6 1.8447 -4.4196 1.1870 9 7 2.1280 -5.7360 0.7786 10 6 1.2614 -6.7295 1.0580 11 8 0.2347 -6.4885 1.6635 12 6 1.5584 -8.1111 0.6289 13 6 2.7360 -8.3913 -0.0669 14 6 3.0074 -9.6855 -0.4657 15 9 4.1461 -9.9582 -1.1395 16 6 2.1137 -10.7052 -0.1773 17 6 2.4168 -12.1145 -0.6164 18 8 3.4259 -12.6702 0.2292 19 14 3.0221 -12.0994 -2.3782 20 1 4.2545 -11.2762 -2.4712 21 1 3.3202 -13.4883 -2.8111 22 1 1.9735 -11.5219 -3.2569 23 6 0.9460 -10.4353 0.5115 24 6 0.6613 -9.1445 0.9169 25 9 -0.4806 -8.8821 1.5895 26 6 0.7020 -3.9985 1.8831 27 7 0.7959 -2.7096 2.0869 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.5740 1.7565 0.0005 32 1 2.1207 2.2703 -0.8901 33 1 2.1207 2.2703 0.8900 34 1 2.1206 -1.9059 -1.5211 35 1 2.1207 -0.3644 -2.4111 36 1 3.5740 -0.8779 -1.5213 37 1 2.1206 -0.3643 2.4112 38 1 3.5740 -0.8778 1.5214 39 1 3.5755 -3.3171 0.4581 40 1 2.9468 -5.9282 0.2953 41 1 3.4309 -7.5973 -0.2967 42 1 1.5122 -12.7188 -0.5481 43 1 4.2607 -12.1823 0.2185 44 1 0.2543 -11.2346 0.7333 45 1 -0.1144 -4.6308 2.1994 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:13:22 Heat of formation + Delta-G solvation = -70.923682 kcal Electronic energy + Delta-G solvation = -30651.261264 eV Core-core repulsion = 26045.112194 eV Total energy + Delta-G solvation = -4606.149069 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 369.123 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.58515 -49.99380 -42.34770 -41.07593 -39.80723 -37.76337 -36.00036 -33.93256 -33.18237 -31.45034 -30.44782 -29.71106 -28.61034 -28.46611 -28.07912 -26.79609 -24.66037 -24.04854 -22.74981 -22.15637 -21.25258 -19.49419 -19.24615 -18.66893 -18.28218 -17.81853 -17.62720 -17.18565 -16.77451 -16.65944 -16.46177 -16.16695 -16.00837 -15.73917 -15.69362 -15.22942 -15.04208 -14.67991 -14.59560 -14.37271 -14.33319 -14.13052 -14.05437 -13.96606 -13.82085 -13.57593 -13.44042 -13.42572 -13.27034 -13.18587 -13.10162 -12.58687 -12.23566 -12.21366 -11.67719 -11.41496 -11.39506 -11.06196 -11.04666 -10.95047 -10.86644 -10.44089 -10.04565 -9.88210 -8.62766 -0.88451 -0.39708 0.73155 0.94020 1.22025 1.30597 1.38003 1.43946 1.51211 1.65621 1.75984 1.83867 1.93840 2.04010 2.38033 2.39599 2.68696 2.76632 3.00387 3.15856 3.31860 3.41124 3.65235 3.68709 3.84190 4.06824 4.12622 4.24054 4.26250 4.45759 4.47858 4.54300 4.56560 4.59286 4.60425 4.60697 4.66733 4.70636 4.72474 4.75615 4.78998 5.07545 5.30540 5.30891 5.37887 5.56175 5.88325 5.98584 6.23314 6.27507 6.77110 7.00072 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.020 2.980 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.169 4.169 6 N -0.343 5.343 7 C 0.018 3.982 8 C -0.007 4.007 9 N -0.634 5.634 10 C 0.561 3.439 11 O -0.503 6.503 12 C -0.143 4.143 13 C -0.087 4.087 14 C 0.074 3.926 15 F -0.119 7.119 16 C -0.093 4.093 17 C -0.086 4.086 18 O -0.528 6.528 19 Si 0.938 3.062 20 H -0.226 1.226 21 H -0.249 1.249 22 H -0.249 1.249 23 C -0.113 4.113 24 C 0.162 3.838 25 F -0.103 7.103 26 C 0.049 3.951 27 N -0.280 5.280 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.075 0.925 33 H 0.072 0.928 34 H 0.070 0.930 35 H 0.074 0.926 36 H 0.070 0.930 37 H 0.105 0.895 38 H 0.099 0.901 39 H 0.177 0.823 40 H 0.409 0.591 41 H 0.152 0.848 42 H 0.128 0.872 43 H 0.378 0.622 44 H 0.160 0.840 45 H 0.205 0.795 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.328 1.279 -3.987 6.777 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.214 2.786 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.335 4.335 6 N -0.125 5.125 7 C -0.130 4.130 8 C -0.111 4.111 9 N -0.280 5.280 10 C 0.348 3.652 11 O -0.378 6.378 12 C -0.147 4.147 13 C -0.106 4.106 14 C 0.055 3.945 15 F -0.098 7.098 16 C -0.095 4.095 17 C -0.195 4.195 18 O -0.333 6.333 19 Si 0.757 3.243 20 H -0.149 1.149 21 H -0.173 1.173 22 H -0.172 1.172 23 C -0.132 4.132 24 C 0.141 3.859 25 F -0.081 7.081 26 C -0.137 4.137 27 N -0.103 5.103 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.094 0.906 33 H 0.092 0.908 34 H 0.089 0.911 35 H 0.093 0.907 36 H 0.089 0.911 37 H 0.124 0.876 38 H 0.117 0.883 39 H 0.194 0.806 40 H 0.245 0.755 41 H 0.170 0.830 42 H 0.146 0.854 43 H 0.226 0.774 44 H 0.178 0.822 45 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 3.927 2.149 -3.716 5.818 hybrid contribution 1.195 -0.436 -0.104 1.277 sum 5.122 1.713 -3.819 6.615 Atomic orbital electron populations 1.26073 1.20030 1.04932 1.04438 0.79373 0.68118 0.66390 0.64731 1.26099 1.06377 1.18234 1.05109 1.26128 1.06124 1.08282 1.15240 1.26974 1.04479 0.83154 1.18910 1.48004 1.15607 1.06400 1.42498 1.21872 1.00142 0.86476 1.04555 1.17593 0.98781 0.84337 1.10412 1.42531 1.23716 1.04825 1.56902 1.17747 0.83573 0.83797 0.80096 1.90781 1.25093 1.82764 1.39171 1.19720 0.96365 0.93704 1.04909 1.21119 0.96480 0.96003 0.97037 1.17349 0.85005 0.93443 0.98716 1.91616 1.47556 1.93748 1.76871 1.20436 0.94231 0.96634 0.98154 1.25101 0.96852 0.90711 1.06850 1.86593 1.24645 1.54676 1.67401 0.86084 0.82802 0.82027 0.73338 1.14870 1.17297 1.17220 1.20970 0.97917 0.95632 0.98680 1.17627 0.83054 0.92410 0.92806 1.91664 1.45774 1.94453 1.76226 1.24491 0.98851 0.91805 0.98572 1.77485 1.01107 1.12213 1.19463 0.91007 0.91216 0.90986 0.90974 0.90560 0.90846 0.91124 0.90720 0.91113 0.87618 0.88251 0.80602 0.75500 0.83026 0.85382 0.77423 0.82197 0.77820 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.15 8.65 101.05 0.87 1.03 16 2 Si 1.02 -3.35 12.79 -169.99 -2.17 -5.52 16 3 C -0.45 1.38 8.65 101.05 0.87 2.25 16 4 C -0.45 1.18 8.65 101.05 0.87 2.05 16 5 C -0.17 0.37 5.59 59.84 0.33 0.70 16 6 N -0.34 -0.29 3.01 -9.16 -0.03 -0.32 16 7 C 0.02 -0.01 11.44 -16.67 -0.19 -0.20 16 8 C -0.01 -0.01 6.90 -83.90 -0.58 -0.59 16 9 N -0.63 0.27 5.42 -10.93 -0.06 0.21 16 10 C 0.56 1.06 7.74 -12.41 -0.10 0.96 16 11 O -0.50 -2.71 12.49 5.28 0.07 -2.64 16 12 C -0.14 0.00 5.88 -104.92 -0.62 -0.62 16 13 C -0.09 0.21 9.52 -39.11 -0.37 -0.16 16 14 C 0.07 -0.13 6.60 -39.49 -0.26 -0.40 16 15 F -0.12 0.20 12.55 2.25 0.03 0.23 16 16 C -0.09 0.15 4.79 -104.48 -0.50 -0.35 16 17 C -0.09 0.18 2.80 36.00 0.10 0.28 16 18 O -0.53 0.52 12.88 -35.23 -0.45 0.06 16 19 Si 0.94 -1.46 26.08 -169.99 -4.43 -5.89 16 20 H -0.23 0.28 5.28 56.52 0.30 0.58 16 21 H -0.25 0.02 7.11 56.52 0.40 0.42 16 22 H -0.25 0.16 7.11 56.52 0.40 0.56 16 23 C -0.11 0.14 9.63 -39.57 -0.38 -0.24 16 24 C 0.16 0.13 7.28 -38.97 -0.28 -0.15 16 25 F -0.10 -0.35 15.55 2.25 0.04 -0.31 16 26 C 0.05 0.20 10.84 -17.21 -0.19 0.01 16 27 N -0.28 -1.13 12.56 30.71 0.39 -0.74 16 28 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 29 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 30 H 0.07 0.12 7.96 -51.93 -0.41 -0.30 16 31 H 0.07 -0.26 7.96 -51.92 -0.41 -0.67 16 32 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 33 H 0.07 -0.21 7.96 -51.93 -0.41 -0.63 16 34 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 35 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.07 -0.25 7.96 -51.93 -0.41 -0.66 16 37 H 0.11 -0.21 7.96 -51.93 -0.41 -0.62 16 38 H 0.10 -0.44 7.96 -51.92 -0.41 -0.85 16 39 H 0.18 -0.75 8.06 -52.49 -0.42 -1.17 16 40 H 0.41 -1.69 6.86 -40.82 -0.28 -1.97 16 41 H 0.15 -0.85 6.40 -52.49 -0.34 -1.18 16 42 H 0.13 -0.46 7.76 -51.93 -0.40 -0.86 16 43 H 0.38 -1.44 8.39 45.56 0.38 -1.06 16 44 H 0.16 -0.51 7.99 -52.49 -0.42 -0.93 16 45 H 0.21 1.01 5.91 -52.49 -0.31 0.70 16 LS Contribution 386.76 15.07 5.83 5.83 Total: 0.00 -9.31 386.76 -6.45 -15.76 By element: Atomic # 1 Polarization: -6.01 SS G_CDS: -5.24 Total: -11.24 kcal Atomic # 6 Polarization: 4.99 SS G_CDS: -0.41 Total: 4.58 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: 0.30 Total: -0.85 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -0.39 Total: -2.58 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.06 Total: -0.09 kcal Atomic # 14 Polarization: -4.81 SS G_CDS: -6.61 Total: -11.41 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -9.31 -6.45 -15.76 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.163 kcal (2) G-P(sol) polarization free energy of solvation -9.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.474 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.761 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds