Wall clock time and date at job start Sun Mar 7 2021 10:13:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35665 * 116.99956 * 2 1 4 4 C 1.38660 * 120.15030 * 0.02562 * 3 2 1 5 5 C 1.38097 * 120.08533 * 179.97438 * 4 3 2 6 6 C 1.38501 * 120.39247 * 359.97438 * 5 4 3 7 7 C 1.50704 * 119.85410 * 180.02562 * 6 5 4 8 8 O 1.42901 * 109.46749 * 245.00112 * 7 6 5 9 9 Si 1.86306 * 109.46840 * 4.99864 * 7 6 5 10 10 H 1.48493 * 109.47377 * 59.99934 * 9 7 6 11 11 H 1.48494 * 109.47119 * 180.02562 * 9 7 6 12 12 H 1.48504 * 109.46858 * 299.99936 * 9 7 6 13 13 C 1.37830 * 120.30092 * 0.02562 * 6 5 4 14 14 C 1.39677 * 119.90464 * 359.75122 * 13 6 5 15 15 C 1.47524 * 120.19521 * 180.25319 * 14 13 6 16 16 O 1.21615 * 120.00508 * 180.25162 * 15 14 13 17 17 N 1.34781 * 119.99582 * 0.24498 * 15 14 13 18 18 C 1.40724 * 119.99811 * 180.02562 * 17 15 14 19 19 C 1.35768 * 126.07912 * 180.02562 * 18 17 15 20 20 N 1.35827 * 107.55451 * 179.97438 * 19 18 17 21 21 C 1.46497 * 126.04864 * 179.97438 * 20 19 18 22 22 Si 1.86293 * 109.47521 * 89.99912 * 21 20 19 23 23 C 1.86305 * 109.47319 * 59.99818 * 22 21 20 24 24 C 1.86308 * 109.47439 * 179.97438 * 22 21 20 25 25 C 1.86298 * 109.47389 * 299.99711 * 22 21 20 26 26 N 1.40060 * 107.89644 * 359.97438 * 20 19 18 27 27 C 1.30832 * 108.37247 * 359.74426 * 26 20 19 28 28 H 1.09006 * 109.47331 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47220 * 299.99753 * 1 2 3 30 30 H 1.08996 * 109.47672 * 59.99696 * 1 2 3 31 31 H 1.08004 * 119.95460 * 359.97438 * 4 3 2 32 32 H 1.08001 * 119.80639 * 180.02562 * 5 4 3 33 33 H 1.08993 * 109.47291 * 124.99730 * 7 6 5 34 34 H 0.96703 * 113.99307 * 179.97438 * 8 7 6 35 35 H 1.07997 * 120.04898 * 179.97438 * 13 6 5 36 36 H 0.96994 * 120.00278 * 0.02562 * 17 15 14 37 37 H 1.08000 * 126.22121 * 359.96601 * 19 18 17 38 38 H 1.09008 * 109.46863 * 209.99634 * 21 20 19 39 39 H 1.08997 * 109.47322 * 329.99167 * 21 20 19 40 40 H 1.08997 * 109.47128 * 59.99763 * 23 22 21 41 41 H 1.08996 * 109.47345 * 180.02562 * 23 22 21 42 42 H 1.09004 * 109.46670 * 300.00023 * 23 22 21 43 43 H 1.09003 * 109.46426 * 59.99780 * 24 22 21 44 44 H 1.08996 * 109.47235 * 179.97438 * 24 22 21 45 45 H 1.08997 * 109.46940 * 300.00196 * 24 22 21 46 46 H 1.09004 * 109.47109 * 59.99665 * 25 22 21 47 47 H 1.08996 * 109.47566 * 179.97438 * 25 22 21 48 48 H 1.09003 * 109.47071 * 300.00584 * 25 22 21 49 49 H 1.08010 * 125.83236 * 180.23398 * 27 26 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2927 2.3737 0.0005 5 6 1.9210 3.6034 0.0011 6 6 3.3037 3.6838 0.0016 7 6 3.9767 5.0322 0.0028 8 8 4.6993 5.2049 -1.2180 9 14 2.6883 6.3692 0.1563 10 1 1.9374 6.1897 1.4247 11 1 3.3514 7.6978 0.1568 12 1 1.7492 6.2856 -0.9910 13 6 4.0670 2.5362 0.0011 14 6 3.4445 1.2858 0.0053 15 6 4.2553 0.0533 0.0104 16 8 3.7097 -1.0336 0.0094 17 7 5.6008 0.1319 0.0160 18 6 6.3742 -1.0437 0.0203 19 6 7.7303 -1.1085 0.0266 20 7 8.0777 -2.4216 0.0296 21 6 9.4432 -2.9522 0.0359 22 14 10.0148 -3.1749 1.7950 23 6 8.8815 -4.3669 2.6701 24 6 11.7511 -3.8504 1.8030 25 6 9.9834 -1.5312 2.6711 26 7 6.8992 -3.1786 0.0256 27 6 5.8812 -2.3567 0.0260 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 0.2140 2.3191 0.0005 32 1 1.3307 4.5079 0.0019 33 1 4.6660 5.0935 0.8448 34 1 5.1584 6.0532 -1.2865 35 1 5.1448 2.6036 0.0011 36 1 6.0360 0.9988 0.0171 37 1 8.4094 -0.2687 0.0287 38 1 9.4616 -3.9140 -0.4766 39 1 10.1063 -2.2549 -0.4761 40 1 8.8999 -5.3286 2.1575 41 1 9.2157 -4.4969 3.6994 42 1 7.8655 -3.9720 2.6654 43 1 12.4144 -3.1533 1.2908 44 1 12.0857 -3.9803 2.8321 45 1 11.7692 -4.8122 1.2905 46 1 8.9674 -1.1363 2.6665 47 1 10.3174 -1.6616 3.7004 48 1 10.6464 -0.8338 2.1591 49 1 4.8392 -2.6409 0.0270 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:13:33 Heat of formation + Delta-G solvation = -25.482108 kcal Electronic energy + Delta-G solvation = -30180.668334 eV Core-core repulsion = 26041.177900 eV Total energy + Delta-G solvation = -4139.490435 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.157 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.19579 -41.50778 -39.75533 -39.09998 -37.26856 -35.64622 -33.67547 -32.65892 -31.95442 -30.17642 -29.63077 -28.59539 -28.51706 -28.38870 -26.99870 -26.16310 -25.13754 -23.02777 -22.37455 -21.62144 -20.76167 -19.41339 -18.61962 -18.27581 -17.93851 -17.47656 -16.79633 -16.53598 -16.36185 -16.21858 -15.93827 -15.81857 -15.51754 -14.98434 -14.88132 -14.60526 -14.46833 -14.28119 -14.25848 -14.03827 -13.92129 -13.88035 -13.68690 -13.52609 -13.45753 -13.37037 -13.19967 -13.11752 -13.01698 -12.53542 -12.41705 -12.14021 -12.03589 -11.99420 -11.77440 -11.52909 -11.21136 -10.99151 -10.88231 -10.68482 -10.39013 -10.18444 -9.89486 -9.26330 -8.41175 -0.24944 0.22495 0.90237 1.04566 1.34333 1.38710 1.40804 1.54959 1.72258 1.76879 1.81146 1.93093 2.24475 2.25892 2.32381 2.46851 2.80895 3.28736 3.53297 3.59225 3.74928 3.79764 3.96955 4.01290 4.10037 4.19098 4.24133 4.25119 4.40484 4.45481 4.55139 4.60342 4.60874 4.62544 4.65848 4.66620 4.68064 4.77702 4.81987 4.84614 4.86483 4.95121 5.09215 5.27368 5.34462 5.36978 5.44450 5.51087 5.62582 6.06710 6.16682 6.31459 6.48229 6.56943 6.95083 7.37746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.278 6.278 3 C 0.195 3.805 4 C -0.212 4.212 5 C -0.052 4.052 6 C -0.123 4.123 7 C -0.076 4.076 8 O -0.545 6.545 9 Si 0.942 3.058 10 H -0.249 1.249 11 H -0.255 1.255 12 H -0.247 1.247 13 C -0.017 4.017 14 C -0.171 4.171 15 C 0.564 3.436 16 O -0.505 6.505 17 N -0.643 5.643 18 C 0.002 3.998 19 C 0.011 3.989 20 N -0.345 5.345 21 C -0.168 4.168 22 Si 1.018 2.982 23 C -0.446 4.446 24 C -0.449 4.449 25 C -0.449 4.449 26 N -0.283 5.283 27 C 0.047 3.953 28 H 0.106 0.894 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.142 0.858 32 H 0.128 0.872 33 H 0.078 0.922 34 H 0.381 0.619 35 H 0.136 0.864 36 H 0.407 0.593 37 H 0.175 0.825 38 H 0.104 0.896 39 H 0.098 0.902 40 H 0.070 0.930 41 H 0.068 0.932 42 H 0.071 0.929 43 H 0.071 0.929 44 H 0.075 0.925 45 H 0.072 0.928 46 H 0.070 0.930 47 H 0.073 0.927 48 H 0.069 0.931 49 H 0.205 0.795 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.468 6.112 1.677 6.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.188 6.188 3 C 0.146 3.854 4 C -0.231 4.231 5 C -0.070 4.070 6 C -0.124 4.124 7 C -0.186 4.186 8 O -0.351 6.351 9 Si 0.764 3.236 10 H -0.172 1.172 11 H -0.179 1.179 12 H -0.171 1.171 13 C -0.035 4.035 14 C -0.175 4.175 15 C 0.353 3.647 16 O -0.380 6.380 17 N -0.289 5.289 18 C -0.103 4.103 19 C -0.137 4.137 20 N -0.128 5.128 21 C -0.334 4.334 22 Si 1.212 2.788 23 C -0.554 4.554 24 C -0.558 4.558 25 C -0.557 4.557 26 N -0.106 5.106 27 C -0.139 4.139 28 H 0.124 0.876 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.159 0.841 32 H 0.146 0.854 33 H 0.096 0.904 34 H 0.228 0.772 35 H 0.154 0.846 36 H 0.243 0.757 37 H 0.192 0.808 38 H 0.122 0.878 39 H 0.116 0.884 40 H 0.089 0.911 41 H 0.087 0.913 42 H 0.090 0.910 43 H 0.090 0.910 44 H 0.094 0.906 45 H 0.091 0.909 46 H 0.089 0.911 47 H 0.092 0.908 48 H 0.089 0.911 49 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 1.725 3.919 1.573 4.562 hybrid contribution 0.263 1.882 -0.124 1.905 sum 1.989 5.801 1.449 6.302 Atomic orbital electron populations 1.23238 0.78174 1.04787 1.01440 1.86378 1.21208 1.25079 1.86156 1.19033 0.90823 0.85077 0.90442 1.21182 1.00743 0.91435 1.09720 1.20985 0.93771 0.97667 0.94580 1.19010 0.92892 0.93937 1.06543 1.24632 1.02756 1.01275 0.89986 1.86516 1.69355 1.42147 1.37086 0.85804 0.78962 0.77181 0.81610 1.17209 1.17897 1.17069 1.20936 0.99826 0.89788 0.92987 1.19158 0.90802 0.93423 1.14158 1.17876 0.81039 0.88885 0.76935 1.90727 1.71163 1.28287 1.47779 1.42659 1.05511 1.07141 1.73567 1.17632 0.89539 0.87572 1.15543 1.21839 0.94599 0.88585 1.08717 1.47943 1.05491 1.03148 1.56250 1.26927 0.80569 1.03971 1.21896 0.79390 0.66891 0.68188 0.64282 1.26066 1.10717 1.11034 1.07598 1.26097 1.17813 1.06829 1.05047 1.26122 1.04649 1.16657 1.08303 1.77444 0.89635 1.19601 1.23894 1.24498 0.99958 0.88998 1.00437 0.87606 0.92310 0.92321 0.84066 0.85443 0.90427 0.77156 0.84629 0.75701 0.80782 0.87773 0.88384 0.91051 0.91281 0.90950 0.90998 0.90613 0.90877 0.91062 0.90795 0.91136 0.77841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.03 8.57 -40.57 -0.35 -1.38 16 3 C 0.20 0.55 6.70 -38.70 -0.26 0.29 16 4 C -0.21 -0.13 9.03 -39.48 -0.36 -0.48 16 5 C -0.05 -0.01 8.65 -39.54 -0.34 -0.35 16 6 C -0.12 -0.02 5.38 -104.67 -0.56 -0.59 16 7 C -0.08 0.14 2.79 36.01 0.10 0.24 16 8 O -0.54 0.77 12.81 -35.23 -0.45 0.31 16 9 Si 0.94 -1.68 25.12 -169.99 -4.27 -5.95 16 10 H -0.25 0.30 7.11 56.52 0.40 0.70 16 11 H -0.25 0.39 7.11 56.52 0.40 0.79 16 12 H -0.25 0.10 7.04 56.52 0.40 0.49 16 13 C -0.02 -0.01 9.16 -39.19 -0.36 -0.36 16 14 C -0.17 -0.45 5.89 -104.85 -0.62 -1.07 16 15 C 0.56 2.34 7.74 -12.47 -0.10 2.25 16 16 O -0.50 -3.66 12.31 -16.61 -0.20 -3.86 16 17 N -0.64 -1.10 5.42 -10.98 -0.06 -1.16 16 18 C 0.00 0.01 6.90 -83.90 -0.58 -0.57 16 19 C 0.01 0.01 11.44 -16.67 -0.19 -0.18 16 20 N -0.35 -0.69 3.01 -9.16 -0.03 -0.72 16 21 C -0.17 0.20 5.59 59.85 0.33 0.54 16 22 Si 1.02 -2.57 12.79 -169.99 -2.17 -4.74 16 23 C -0.45 -0.15 8.65 101.05 0.87 0.72 16 24 C -0.45 1.11 8.65 101.05 0.87 1.99 16 25 C -0.45 0.84 8.65 101.05 0.87 1.71 16 26 N -0.28 -1.46 12.56 30.71 0.39 -1.07 16 27 C 0.05 0.26 10.84 -17.22 -0.19 0.07 16 28 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 30 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 31 H 0.14 -0.24 6.30 -52.48 -0.33 -0.57 16 32 H 0.13 -0.18 4.83 -52.49 -0.25 -0.43 16 33 H 0.08 -0.30 7.96 -51.93 -0.41 -0.72 16 34 H 0.38 -2.15 8.74 45.56 0.40 -1.75 16 35 H 0.14 -0.31 6.40 -52.49 -0.34 -0.65 16 36 H 0.41 -0.67 6.86 -40.82 -0.28 -0.95 16 37 H 0.18 -0.48 8.06 -52.49 -0.42 -0.90 16 38 H 0.10 -0.12 7.96 -51.92 -0.41 -0.53 16 39 H 0.10 -0.34 7.96 -51.93 -0.41 -0.75 16 40 H 0.07 0.04 7.96 -51.93 -0.41 -0.37 16 41 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 42 H 0.07 0.17 7.96 -51.93 -0.41 -0.24 16 43 H 0.07 -0.21 7.96 -51.93 -0.41 -0.63 16 44 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 45 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 46 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 47 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 48 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 49 H 0.21 1.31 5.91 -52.48 -0.31 1.00 16 LS Contribution 405.84 15.07 6.12 6.12 Total: 0.00 -10.54 405.84 -7.05 -17.59 By element: Atomic # 1 Polarization: -3.80 SS G_CDS: -6.51 Total: -10.31 kcal Atomic # 6 Polarization: 4.68 SS G_CDS: 0.50 Total: 5.18 kcal Atomic # 7 Polarization: -3.25 SS G_CDS: 0.30 Total: -2.95 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -1.00 Total: -4.92 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: -6.44 Total: -10.70 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -10.54 -7.05 -17.59 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.891 kcal (2) G-P(sol) polarization free energy of solvation -10.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds