Wall clock time and date at job start Sun Mar 7 2021 10:13:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35665 * 116.99956 * 2 1 4 4 C 1.38660 * 120.15030 * 0.02562 * 3 2 1 5 5 C 1.38097 * 120.08533 * 179.97438 * 4 3 2 6 6 C 1.38501 * 120.39247 * 359.97438 * 5 4 3 7 7 C 1.50704 * 119.85410 * 180.02562 * 6 5 4 8 8 O 1.42901 * 109.46749 * 245.00112 * 7 6 5 9 9 Si 1.86306 * 109.46840 * 4.99864 * 7 6 5 10 10 H 1.48493 * 109.47377 * 59.99934 * 9 7 6 11 11 H 1.48494 * 109.47119 * 180.02562 * 9 7 6 12 12 H 1.48504 * 109.46858 * 299.99936 * 9 7 6 13 13 C 1.37830 * 120.30092 * 0.02562 * 6 5 4 14 14 C 1.39677 * 119.90464 * 359.75122 * 13 6 5 15 15 C 1.47524 * 120.19521 * 180.25319 * 14 13 6 16 16 O 1.21615 * 120.00508 * 180.25162 * 15 14 13 17 17 N 1.34781 * 119.99582 * 0.24498 * 15 14 13 18 18 C 1.40724 * 119.99811 * 180.02562 * 17 15 14 19 19 C 1.35768 * 126.07912 * 180.02562 * 18 17 15 20 20 N 1.35827 * 107.55451 * 179.97438 * 19 18 17 21 21 C 1.46497 * 126.04864 * 179.97438 * 20 19 18 22 22 Si 1.86293 * 109.47521 * 89.99912 * 21 20 19 23 23 C 1.86305 * 109.47319 * 59.99818 * 22 21 20 24 24 C 1.86308 * 109.47439 * 179.97438 * 22 21 20 25 25 C 1.86298 * 109.47389 * 299.99711 * 22 21 20 26 26 N 1.40060 * 107.89644 * 359.97438 * 20 19 18 27 27 C 1.30832 * 108.37247 * 359.74426 * 26 20 19 28 28 H 1.09006 * 109.47331 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47220 * 299.99753 * 1 2 3 30 30 H 1.08996 * 109.47672 * 59.99696 * 1 2 3 31 31 H 1.08004 * 119.95460 * 359.97438 * 4 3 2 32 32 H 1.08001 * 119.80639 * 180.02562 * 5 4 3 33 33 H 1.08993 * 109.47291 * 124.99730 * 7 6 5 34 34 H 0.96703 * 113.99307 * 179.97438 * 8 7 6 35 35 H 1.07997 * 120.04898 * 179.97438 * 13 6 5 36 36 H 0.96994 * 120.00278 * 0.02562 * 17 15 14 37 37 H 1.08000 * 126.22121 * 359.96601 * 19 18 17 38 38 H 1.09008 * 109.46863 * 209.99634 * 21 20 19 39 39 H 1.08997 * 109.47322 * 329.99167 * 21 20 19 40 40 H 1.08997 * 109.47128 * 59.99763 * 23 22 21 41 41 H 1.08996 * 109.47345 * 180.02562 * 23 22 21 42 42 H 1.09004 * 109.46670 * 300.00023 * 23 22 21 43 43 H 1.09003 * 109.46426 * 59.99780 * 24 22 21 44 44 H 1.08996 * 109.47235 * 179.97438 * 24 22 21 45 45 H 1.08997 * 109.46940 * 300.00196 * 24 22 21 46 46 H 1.09004 * 109.47109 * 59.99665 * 25 22 21 47 47 H 1.08996 * 109.47566 * 179.97438 * 25 22 21 48 48 H 1.09003 * 109.47071 * 300.00584 * 25 22 21 49 49 H 1.08010 * 125.83236 * 180.23398 * 27 26 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2927 2.3737 0.0005 5 6 1.9210 3.6034 0.0011 6 6 3.3037 3.6838 0.0016 7 6 3.9767 5.0322 0.0028 8 8 4.6993 5.2049 -1.2180 9 14 2.6883 6.3692 0.1563 10 1 1.9374 6.1897 1.4247 11 1 3.3514 7.6978 0.1568 12 1 1.7492 6.2856 -0.9910 13 6 4.0670 2.5362 0.0011 14 6 3.4445 1.2858 0.0053 15 6 4.2553 0.0533 0.0104 16 8 3.7097 -1.0336 0.0094 17 7 5.6008 0.1319 0.0160 18 6 6.3742 -1.0437 0.0203 19 6 7.7303 -1.1085 0.0266 20 7 8.0777 -2.4216 0.0296 21 6 9.4432 -2.9522 0.0359 22 14 10.0148 -3.1749 1.7950 23 6 8.8815 -4.3669 2.6701 24 6 11.7511 -3.8504 1.8030 25 6 9.9834 -1.5312 2.6711 26 7 6.8992 -3.1786 0.0256 27 6 5.8812 -2.3567 0.0260 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 0.2140 2.3191 0.0005 32 1 1.3307 4.5079 0.0019 33 1 4.6660 5.0935 0.8448 34 1 5.1584 6.0532 -1.2865 35 1 5.1448 2.6036 0.0011 36 1 6.0360 0.9988 0.0171 37 1 8.4094 -0.2687 0.0287 38 1 9.4616 -3.9140 -0.4766 39 1 10.1063 -2.2549 -0.4761 40 1 8.8999 -5.3286 2.1575 41 1 9.2157 -4.4969 3.6994 42 1 7.8655 -3.9720 2.6654 43 1 12.4144 -3.1533 1.2908 44 1 12.0857 -3.9803 2.8321 45 1 11.7692 -4.8122 1.2905 46 1 8.9674 -1.1363 2.6665 47 1 10.3174 -1.6616 3.7004 48 1 10.6464 -0.8338 2.1591 49 1 4.8392 -2.6409 0.0270 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608520_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:13:32 Heat of formation + Delta-G solvation = -23.845361 kcal Electronic energy + Delta-G solvation = -30180.597360 eV Core-core repulsion = 26041.177900 eV Total energy + Delta-G solvation = -4139.419460 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.157 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.37320 -41.59218 -39.95304 -39.08722 -37.15083 -35.87199 -33.79756 -32.72677 -31.93791 -30.30174 -29.50414 -28.54452 -28.36634 -28.31360 -27.05041 -26.07700 -25.23739 -23.13698 -22.48053 -21.70607 -20.94699 -19.47375 -18.46498 -18.38648 -17.99647 -17.49832 -16.88733 -16.63916 -16.48078 -16.19421 -15.96289 -15.73724 -15.68254 -15.09757 -14.86280 -14.68077 -14.39141 -14.16935 -14.14206 -14.01617 -13.84031 -13.81700 -13.79206 -13.52384 -13.40051 -13.19927 -13.12687 -13.00969 -12.96221 -12.45852 -12.38126 -12.14073 -12.06765 -11.92801 -11.74866 -11.67713 -11.34162 -10.90732 -10.83588 -10.78918 -10.24963 -10.21645 -10.00316 -9.30964 -8.57253 -0.31886 0.21658 0.80993 1.21895 1.37972 1.48972 1.50212 1.56241 1.68692 1.88745 1.95779 2.01983 2.10108 2.22485 2.26431 2.59123 2.70181 3.44722 3.51006 3.65570 3.77001 3.85669 4.00004 4.05570 4.15588 4.27232 4.31173 4.34303 4.36196 4.56479 4.58670 4.68435 4.69951 4.71591 4.73213 4.75201 4.76347 4.84625 4.85781 4.88449 4.90057 4.92843 5.07278 5.13487 5.28274 5.52312 5.54441 5.61919 5.66953 5.80354 6.10733 6.28168 6.48051 6.72380 6.89975 7.20924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.310 6.310 3 C 0.172 3.828 4 C -0.213 4.213 5 C -0.058 4.058 6 C -0.131 4.131 7 C -0.071 4.071 8 O -0.561 6.561 9 Si 0.968 3.032 10 H -0.258 1.258 11 H -0.256 1.256 12 H -0.271 1.271 13 C -0.012 4.012 14 C -0.190 4.190 15 C 0.556 3.444 16 O -0.548 6.548 17 N -0.627 5.627 18 C -0.021 4.021 19 C 0.032 3.968 20 N -0.339 5.339 21 C -0.190 4.190 22 Si 1.093 2.907 23 C -0.475 4.475 24 C -0.453 4.453 25 C -0.458 4.458 26 N -0.318 5.318 27 C 0.021 3.979 28 H 0.109 0.891 29 H 0.073 0.927 30 H 0.071 0.929 31 H 0.160 0.840 32 H 0.142 0.858 33 H 0.105 0.895 34 H 0.399 0.601 35 H 0.162 0.838 36 H 0.424 0.576 37 H 0.222 0.778 38 H 0.102 0.898 39 H 0.133 0.867 40 H 0.061 0.939 41 H 0.069 0.931 42 H 0.044 0.956 43 H 0.085 0.915 44 H 0.074 0.926 45 H 0.071 0.929 46 H 0.059 0.941 47 H 0.071 0.929 48 H 0.089 0.911 49 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.081 8.664 1.587 10.168 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.222 6.222 3 C 0.124 3.876 4 C -0.231 4.231 5 C -0.076 4.076 6 C -0.131 4.131 7 C -0.182 4.182 8 O -0.371 6.371 9 Si 0.793 3.207 10 H -0.182 1.182 11 H -0.180 1.180 12 H -0.196 1.196 13 C -0.030 4.030 14 C -0.194 4.194 15 C 0.346 3.654 16 O -0.426 6.426 17 N -0.274 5.274 18 C -0.126 4.126 19 C -0.117 4.117 20 N -0.122 5.122 21 C -0.354 4.354 22 Si 1.283 2.717 23 C -0.579 4.579 24 C -0.562 4.562 25 C -0.566 4.566 26 N -0.142 5.142 27 C -0.164 4.164 28 H 0.127 0.873 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.178 0.822 32 H 0.159 0.841 33 H 0.123 0.877 34 H 0.250 0.750 35 H 0.179 0.821 36 H 0.263 0.737 37 H 0.238 0.762 38 H 0.120 0.880 39 H 0.151 0.849 40 H 0.081 0.919 41 H 0.088 0.912 42 H 0.064 0.936 43 H 0.104 0.896 44 H 0.093 0.907 45 H 0.090 0.910 46 H 0.079 0.921 47 H 0.091 0.909 48 H 0.108 0.892 49 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 4.341 6.483 1.496 7.945 hybrid contribution -0.524 1.076 -0.086 1.200 sum 3.817 7.559 1.410 8.585 Atomic orbital electron populations 1.23438 0.76629 1.05491 1.02727 1.86337 1.23102 1.26182 1.86551 1.19346 0.91331 0.85440 0.91497 1.21390 1.01675 0.90901 1.09183 1.21270 0.94331 0.97949 0.94014 1.19356 0.93052 0.94987 1.05702 1.24598 1.03200 0.99494 0.90873 1.86469 1.69589 1.43766 1.37236 0.85443 0.78196 0.77142 0.79943 1.18175 1.17993 1.19580 1.21177 1.01121 0.88773 0.91964 1.19263 0.90894 0.93629 1.15609 1.18249 0.81799 0.88934 0.76440 1.90709 1.72090 1.29860 1.49950 1.42490 1.04761 1.07591 1.72574 1.17794 0.90614 0.87120 1.17067 1.22519 0.94235 0.89181 1.05785 1.48275 1.05732 1.03525 1.54655 1.27418 0.79261 1.04951 1.23740 0.78283 0.65251 0.66219 0.61986 1.26515 1.10589 1.12246 1.08582 1.26124 1.17670 1.07180 1.05252 1.26210 1.04449 1.17307 1.08595 1.77369 0.90808 1.20650 1.25385 1.24280 0.99321 0.90721 1.02034 0.87315 0.90866 0.91086 0.82242 0.84106 0.87729 0.75017 0.82078 0.73687 0.76165 0.87959 0.84914 0.91923 0.91223 0.93626 0.89565 0.90680 0.90954 0.92142 0.90937 0.89175 0.80256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 9.81 113.37 1.11 1.12 16 2 O -0.31 -3.17 8.57 -68.90 -0.59 -3.76 16 3 C 0.17 1.28 6.70 22.84 0.15 1.44 16 4 C -0.21 -0.40 9.03 22.34 0.20 -0.20 16 5 C -0.06 -0.01 8.65 22.30 0.19 0.18 16 6 C -0.13 0.06 5.38 -19.90 -0.11 -0.05 16 7 C -0.07 0.39 2.79 71.24 0.20 0.59 16 8 O -0.56 2.67 12.81 -148.98 -1.91 0.76 16 9 Si 0.97 -4.41 25.12 68.60 1.72 -2.68 16 10 H -0.26 0.81 7.11 99.48 0.71 1.52 16 11 H -0.26 1.13 7.11 99.48 0.71 1.84 16 12 H -0.27 0.21 7.04 99.48 0.70 0.91 16 13 C -0.01 0.00 9.16 22.52 0.21 0.20 16 14 C -0.19 -1.26 5.89 -20.01 -0.12 -1.38 16 15 C 0.56 5.88 7.74 86.69 0.67 6.55 16 16 O -0.55 -10.15 12.31 16.84 0.21 -9.95 16 17 N -0.63 -2.60 5.42 -306.89 -1.66 -4.26 16 18 C -0.02 -0.16 6.90 37.63 0.26 0.10 16 19 C 0.03 0.03 11.44 83.50 0.96 0.98 16 20 N -0.34 -1.30 3.01 -182.91 -0.55 -1.86 16 21 C -0.19 0.74 5.59 127.77 0.71 1.45 16 22 Si 1.09 -6.60 12.79 68.60 0.88 -5.73 16 23 C -0.48 -1.16 8.65 113.37 0.98 -0.18 16 24 C -0.45 3.11 8.65 113.37 0.98 4.09 16 25 C -0.46 2.57 8.65 113.37 0.98 3.55 16 26 N -0.32 -4.02 12.56 -56.76 -0.71 -4.74 16 27 C 0.02 0.30 10.84 85.33 0.92 1.22 16 28 H 0.11 -0.09 8.14 -2.38 -0.02 -0.11 16 29 H 0.07 -0.21 7.66 -2.39 -0.02 -0.23 16 30 H 0.07 -0.17 7.66 -2.39 -0.02 -0.19 16 31 H 0.16 -0.50 6.30 -2.91 -0.02 -0.52 16 32 H 0.14 -0.45 4.83 -2.91 -0.01 -0.46 16 33 H 0.10 -1.12 7.96 -2.39 -0.02 -1.14 16 34 H 0.40 -5.36 8.74 -74.05 -0.65 -6.01 16 35 H 0.16 -1.01 6.40 -2.91 -0.02 -1.03 16 36 H 0.42 -1.77 6.86 -92.71 -0.64 -2.41 16 37 H 0.22 -2.10 8.06 -2.91 -0.02 -2.12 16 38 H 0.10 -0.29 7.96 -2.38 -0.02 -0.31 16 39 H 0.13 -1.40 7.96 -2.39 -0.02 -1.41 16 40 H 0.06 0.22 7.96 -2.39 -0.02 0.20 16 41 H 0.07 0.10 7.96 -2.39 -0.02 0.08 16 42 H 0.04 0.35 7.96 -2.39 -0.02 0.34 16 43 H 0.09 -0.78 7.96 -2.39 -0.02 -0.80 16 44 H 0.07 -0.45 7.96 -2.39 -0.02 -0.47 16 45 H 0.07 -0.44 7.96 -2.39 -0.02 -0.46 16 46 H 0.06 -0.17 7.96 -2.39 -0.02 -0.19 16 47 H 0.07 -0.35 7.96 -2.39 -0.02 -0.36 16 48 H 0.09 -0.82 7.96 -2.39 -0.02 -0.84 16 49 H 0.18 3.28 5.91 -2.91 -0.02 3.27 16 Total: 0.00 -29.59 405.84 6.14 -23.45 By element: Atomic # 1 Polarization: -11.38 SS G_CDS: 0.46 Total: -10.93 kcal Atomic # 6 Polarization: 11.37 SS G_CDS: 8.31 Total: 19.68 kcal Atomic # 7 Polarization: -7.92 SS G_CDS: -2.93 Total: -10.85 kcal Atomic # 8 Polarization: -10.65 SS G_CDS: -2.29 Total: -12.94 kcal Atomic # 14 Polarization: -11.01 SS G_CDS: 2.60 Total: -8.41 kcal Total: -29.59 6.14 -23.45 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.397 kcal (2) G-P(sol) polarization free energy of solvation -29.592 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.144 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.448 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds