Wall clock time and date at job start Sun Mar 7 2021 10:17:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86304 * 1 3 3 C 1.86295 * 109.47135 * 2 1 4 4 C 1.86305 * 109.46987 * 239.99714 * 2 1 3 5 5 C 1.86304 * 109.47057 * 120.00190 * 2 1 3 6 6 N 1.46500 * 109.47119 * 60.00013 * 5 2 1 7 7 C 1.35824 * 126.05723 * 89.99891 * 6 5 2 8 8 C 1.35770 * 107.56270 * 179.97438 * 7 6 5 9 9 N 1.40707 * 126.08301 * 179.97438 * 8 7 6 10 10 C 1.34770 * 119.99797 * 180.02562 * 9 8 7 11 11 O 1.21589 * 120.00464 * 0.02562 * 10 9 8 12 12 C 1.47713 * 119.99689 * 180.02562 * 10 9 8 13 13 C 1.39637 * 120.12000 * 359.97438 * 12 10 9 14 14 C 1.37862 * 119.87727 * 180.02562 * 13 12 10 15 15 C 1.38632 * 120.11928 * 0.02648 * 14 13 12 16 16 F 1.35095 * 119.87660 * 179.97438 * 15 14 13 17 17 C 1.38676 * 120.24152 * 359.97153 * 15 14 13 18 18 C 1.50699 * 119.93931 * 180.02562 * 17 15 14 19 19 O 1.42903 * 109.47294 * 195.00522 * 18 17 15 20 20 Si 1.86301 * 109.47146 * 315.00478 * 18 17 15 21 21 H 1.48506 * 109.47302 * 299.99754 * 20 18 17 22 22 H 1.48503 * 109.47334 * 179.97438 * 20 18 17 23 23 H 1.48500 * 109.47376 * 59.99883 * 20 18 17 24 24 C 1.37811 * 120.12006 * 0.27955 * 17 15 14 25 25 C 1.40272 * 107.83234 * 0.26590 * 8 7 6 26 26 N 1.30827 * 108.33578 * 359.55299 * 25 8 7 27 27 H 1.08997 * 109.46775 * 299.99814 * 1 2 3 28 28 H 1.08996 * 109.46503 * 60.00231 * 1 2 3 29 29 H 1.08997 * 109.46931 * 180.02562 * 1 2 3 30 30 H 1.09008 * 109.46763 * 179.97438 * 3 2 1 31 31 H 1.08995 * 109.47483 * 299.99807 * 3 2 1 32 32 H 1.08997 * 109.47138 * 60.00408 * 3 2 1 33 33 H 1.08993 * 109.47580 * 300.00301 * 4 2 1 34 34 H 1.09005 * 109.46871 * 60.00642 * 4 2 1 35 35 H 1.09000 * 109.46891 * 179.97438 * 4 2 1 36 36 H 1.08995 * 109.46796 * 300.00194 * 5 2 1 37 37 H 1.08992 * 109.47044 * 179.97438 * 5 2 1 38 38 H 1.07995 * 126.21411 * 0.02562 * 7 6 5 39 39 H 0.97002 * 119.99993 * 0.02562 * 9 8 7 40 40 H 1.07998 * 120.05746 * 359.97438 * 13 12 10 41 41 H 1.07997 * 119.93797 * 180.02562 * 14 13 12 42 42 H 1.09002 * 109.47485 * 75.00431 * 18 17 15 43 43 H 0.96699 * 113.99816 * 179.97438 * 19 18 17 44 44 H 1.08005 * 120.06167 * 179.70226 * 24 17 15 45 45 H 1.07999 * 125.82630 * 179.73366 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4840 -0.8783 1.5211 6 7 1.9957 -2.2595 1.5211 7 6 2.6257 -3.3302 0.9720 8 6 1.8452 -4.4199 1.1878 9 7 2.1287 -5.7363 0.7797 10 6 1.2625 -6.7300 1.0601 11 8 0.2358 -6.4890 1.6653 12 6 1.5604 -8.1120 0.6322 13 6 2.7385 -8.3916 -0.0634 14 6 3.0113 -9.6832 -0.4609 15 6 2.1183 -10.7034 -0.1716 16 9 2.3903 -11.9672 -0.5639 17 6 0.9469 -10.4313 0.5189 18 6 -0.0188 -11.5456 0.8302 19 8 -1.2768 -10.9908 1.2196 20 14 -0.2501 -12.6077 -0.6828 21 1 -0.7903 -11.7797 -1.7910 22 1 -1.2013 -13.7061 -0.3758 23 1 1.0572 -13.1843 -1.0875 24 6 0.6618 -9.1429 0.9164 25 6 0.7026 -3.9988 1.8841 26 7 0.7965 -2.7099 2.0878 27 1 -0.3633 0.5138 0.8900 28 1 -0.3632 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.5741 1.7563 0.0005 31 1 2.1208 2.2703 -0.8899 32 1 2.1208 2.2702 0.8900 33 1 2.1207 -1.9059 -1.5212 34 1 2.1207 -0.3644 -2.4112 35 1 3.5740 -0.8779 -1.5214 36 1 2.1207 -0.3645 2.4111 37 1 3.5740 -0.8787 1.5209 38 1 3.5754 -3.3172 0.4580 39 1 2.9476 -5.9286 0.2966 40 1 3.4342 -7.5974 -0.2903 41 1 3.9223 -9.9006 -0.9986 42 1 0.3776 -12.1533 1.6436 43 1 -1.9486 -11.6521 1.4349 44 1 -0.2531 -8.9313 1.4500 45 1 -0.1136 -4.6312 2.2007 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:17:06 Heat of formation + Delta-G solvation = -30.062908 kcal Electronic energy + Delta-G solvation = -27928.298650 eV Core-core repulsion = 23793.375412 eV Total energy + Delta-G solvation = -4134.923238 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 351.133 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -50.36886 -42.27935 -41.07653 -39.50380 -37.70142 -35.89831 -33.74959 -32.93634 -32.02100 -30.26110 -29.66984 -28.57362 -28.43359 -27.30179 -26.86799 -25.00162 -23.29317 -22.61512 -22.00560 -20.79941 -19.31061 -18.74540 -18.45027 -18.10234 -17.47202 -17.03251 -16.56106 -16.53426 -16.21380 -15.99896 -15.78304 -15.32314 -15.09956 -15.01869 -14.83287 -14.35028 -14.31380 -14.26331 -14.10673 -14.08724 -13.93033 -13.77088 -13.53058 -13.40905 -13.27204 -13.23663 -13.15692 -12.76403 -12.44184 -12.14922 -11.91420 -11.62047 -11.38281 -11.32690 -11.03276 -10.95247 -10.92604 -10.88717 -10.05186 -9.98768 -9.68409 -8.54365 -0.52414 0.01605 0.80385 1.09406 1.29741 1.42054 1.47335 1.52863 1.60968 1.69158 1.85067 1.93731 2.13459 2.18647 2.42371 2.68568 2.85571 3.07976 3.38817 3.53371 3.70280 3.73209 3.89296 3.92862 4.12323 4.28371 4.29324 4.49482 4.51595 4.56798 4.58971 4.61946 4.63621 4.70394 4.74812 4.78302 4.79026 4.82044 4.83676 5.07076 5.12251 5.20582 5.33368 5.40566 5.58911 5.59376 5.95728 6.05668 6.38325 6.47496 6.84453 7.15881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 1.019 2.981 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.169 4.169 6 N -0.344 5.344 7 C 0.015 3.985 8 C -0.004 4.004 9 N -0.638 5.638 10 C 0.563 3.437 11 O -0.517 6.517 12 C -0.143 4.143 13 C -0.061 4.061 14 C -0.152 4.152 15 C 0.115 3.885 16 F -0.121 7.121 17 C -0.118 4.118 18 C -0.079 4.079 19 O -0.543 6.543 20 Si 0.935 3.065 21 H -0.248 1.248 22 H -0.255 1.255 23 H -0.227 1.227 24 C -0.002 4.002 25 C 0.048 3.952 26 N -0.281 5.281 27 H 0.071 0.929 28 H 0.068 0.932 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.075 0.925 32 H 0.072 0.928 33 H 0.070 0.930 34 H 0.073 0.927 35 H 0.069 0.931 36 H 0.105 0.895 37 H 0.098 0.902 38 H 0.176 0.824 39 H 0.408 0.592 40 H 0.138 0.862 41 H 0.148 0.852 42 H 0.087 0.913 43 H 0.387 0.613 44 H 0.160 0.840 45 H 0.205 0.795 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.114 0.326 -2.622 5.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.214 2.786 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.334 4.334 6 N -0.127 5.127 7 C -0.134 4.134 8 C -0.109 4.109 9 N -0.283 5.283 10 C 0.351 3.649 11 O -0.393 6.393 12 C -0.146 4.146 13 C -0.079 4.079 14 C -0.171 4.171 15 C 0.095 3.905 16 F -0.100 7.100 17 C -0.119 4.119 18 C -0.189 4.189 19 O -0.349 6.349 20 Si 0.754 3.246 21 H -0.171 1.171 22 H -0.179 1.179 23 H -0.150 1.150 24 C -0.021 4.021 25 C -0.138 4.138 26 N -0.104 5.104 27 H 0.090 0.910 28 H 0.088 0.912 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.094 0.906 32 H 0.091 0.909 33 H 0.089 0.911 34 H 0.092 0.908 35 H 0.089 0.911 36 H 0.123 0.877 37 H 0.117 0.883 38 H 0.193 0.807 39 H 0.245 0.755 40 H 0.156 0.844 41 H 0.166 0.834 42 H 0.104 0.896 43 H 0.235 0.765 44 H 0.177 0.823 45 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 4.121 1.608 -2.487 5.075 hybrid contribution 0.898 -1.333 -0.079 1.609 sum 5.019 0.275 -2.567 5.644 Atomic orbital electron populations 1.26069 1.20041 1.04942 1.04402 0.79375 0.68124 0.66352 0.64784 1.26099 1.06366 1.18266 1.05085 1.26126 1.06105 1.08311 1.15221 1.26955 1.04417 0.83244 1.18830 1.47984 1.15681 1.06360 1.42630 1.21861 1.00198 0.86515 1.04783 1.17627 0.98627 0.84561 1.10061 1.42615 1.23911 1.04768 1.57034 1.18057 0.83134 0.84255 0.79421 1.90706 1.25548 1.83132 1.39946 1.19872 0.97072 0.93484 1.04206 1.21166 0.95453 0.96423 0.94891 1.21035 1.00564 0.91904 1.03560 1.17731 0.94979 0.79991 0.97768 1.91596 1.93418 1.36456 1.88519 1.19325 0.94668 0.96113 1.01799 1.24537 0.85955 0.99086 1.09279 1.86412 1.21028 1.37038 1.90417 0.86130 0.81853 0.79120 0.77455 1.17130 1.17890 1.14984 1.20981 0.98495 0.89069 0.93568 1.24496 0.98906 0.91766 0.98649 1.77467 1.01171 1.12268 1.19503 0.91031 0.91237 0.90965 0.90988 0.90579 0.90862 0.91094 0.90751 0.91135 0.87681 0.88319 0.80692 0.75534 0.84450 0.83405 0.89565 0.76472 0.82251 0.77819 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.05 8.65 101.05 0.87 0.93 16 2 Si 1.02 -3.11 12.79 -169.99 -2.17 -5.28 16 3 C -0.45 1.30 8.65 101.05 0.87 2.17 16 4 C -0.45 1.06 8.65 101.05 0.87 1.94 16 5 C -0.17 0.32 5.59 59.85 0.33 0.65 16 6 N -0.34 -0.40 3.01 -9.17 -0.03 -0.43 16 7 C 0.01 0.00 11.44 -16.67 -0.19 -0.19 16 8 C 0.00 -0.01 6.90 -83.90 -0.58 -0.59 16 9 N -0.64 -0.03 5.42 -10.93 -0.06 -0.09 16 10 C 0.56 1.30 7.74 -12.39 -0.10 1.21 16 11 O -0.52 -2.89 13.50 5.29 0.07 -2.82 16 12 C -0.14 -0.11 5.87 -104.97 -0.62 -0.72 16 13 C -0.06 0.12 9.54 -39.20 -0.37 -0.26 16 14 C -0.15 0.22 10.01 -39.57 -0.40 -0.18 16 15 C 0.11 0.05 6.67 -39.27 -0.26 -0.21 16 16 F -0.12 -0.13 12.82 2.25 0.03 -0.10 16 17 C -0.12 -0.13 5.15 -104.62 -0.54 -0.67 16 18 C -0.08 0.02 2.96 36.01 0.11 0.13 16 19 O -0.54 0.08 11.47 -35.23 -0.40 -0.33 16 20 Si 0.93 -0.01 26.09 -169.99 -4.43 -4.44 16 21 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 22 H -0.25 0.02 7.11 56.52 0.40 0.42 16 23 H -0.23 -0.16 5.28 56.52 0.30 0.13 16 24 C 0.00 0.00 8.91 -39.20 -0.35 -0.35 16 25 C 0.05 0.21 10.84 -17.22 -0.19 0.02 16 26 N -0.28 -1.22 12.56 30.71 0.39 -0.83 16 27 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 28 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 29 H 0.07 0.13 7.96 -51.93 -0.41 -0.28 16 30 H 0.07 -0.24 7.96 -51.92 -0.41 -0.66 16 31 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 32 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 33 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 34 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 35 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 36 H 0.10 -0.18 7.96 -51.93 -0.41 -0.60 16 37 H 0.10 -0.41 7.96 -51.93 -0.41 -0.82 16 38 H 0.18 -0.67 8.06 -52.49 -0.42 -1.10 16 39 H 0.41 -1.48 6.85 -40.82 -0.28 -1.76 16 40 H 0.14 -0.74 6.40 -52.49 -0.34 -1.08 16 41 H 0.15 -0.54 8.06 -52.49 -0.42 -0.97 16 42 H 0.09 -0.17 7.96 -51.93 -0.41 -0.58 16 43 H 0.39 -1.72 8.74 45.56 0.40 -1.32 16 44 H 0.16 0.47 6.71 -52.48 -0.35 0.12 16 45 H 0.21 1.07 5.91 -52.49 -0.31 0.76 16 LS Contribution 381.02 15.07 5.74 5.74 Total: 0.00 -9.30 381.02 -6.98 -16.28 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -5.59 Total: -11.58 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: -0.52 Total: 3.89 kcal Atomic # 7 Polarization: -1.65 SS G_CDS: 0.30 Total: -1.35 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.33 Total: -3.15 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.03 Total: -0.10 kcal Atomic # 14 Polarization: -3.12 SS G_CDS: -6.61 Total: -9.73 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -9.30 -6.98 -16.28 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.781 kcal (2) G-P(sol) polarization free energy of solvation -9.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.982 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.281 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds