Wall clock time and date at job start Sun Mar 7 2021 10:18:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39290 * 121.03243 * 2 1 4 4 C 1.46497 * 134.19802 * 359.94802 * 3 2 1 5 5 C 1.50704 * 126.59671 * 0.02951 * 4 3 2 6 6 O 1.42896 * 109.47142 * 284.99534 * 5 4 3 7 7 Si 1.86305 * 109.46899 * 164.99824 * 5 4 3 8 8 H 1.48500 * 109.47083 * 59.99816 * 7 5 4 9 9 H 1.48498 * 109.46727 * 179.97438 * 7 5 4 10 10 H 1.48494 * 109.47047 * 300.00257 * 7 5 4 11 11 C 1.34176 * 106.80342 * 180.02562 * 4 3 2 12 12 N 1.36948 * 109.95333 * 359.97438 * 11 4 3 13 13 C 1.37170 * 110.11023 * 0.02562 * 12 11 4 14 14 N 1.32817 * 132.96154 * 179.97438 * 13 12 11 15 15 C 1.31310 * 121.88756 * 179.73932 * 14 13 12 16 16 C 1.39754 * 121.03010 * 179.97438 * 2 1 3 17 17 C 1.47645 * 120.45413 * 0.02583 * 16 2 1 18 18 O 1.21602 * 120.00333 * 354.23845 * 17 16 2 19 19 N 1.34778 * 119.99799 * 174.24527 * 17 16 2 20 20 C 1.40724 * 120.00106 * 180.02562 * 19 17 16 21 21 C 1.35767 * 126.08370 * 179.97438 * 20 19 17 22 22 N 1.35817 * 107.55929 * 179.72870 * 21 20 19 23 23 C 1.46500 * 126.05525 * 180.02562 * 22 21 20 24 24 Si 1.86308 * 109.47012 * 90.00105 * 23 22 21 25 25 C 1.86304 * 109.46758 * 60.00571 * 24 23 22 26 26 C 1.86294 * 109.46959 * 180.02562 * 24 23 22 27 27 C 1.86297 * 109.47212 * 300.00674 * 24 23 22 28 28 N 1.40067 * 107.89553 * 0.02562 * 22 21 20 29 29 C 1.30833 * 108.37372 * 359.97438 * 28 22 21 30 30 H 1.09007 * 109.47131 * 263.73115 * 1 2 3 31 31 H 1.09001 * 109.47536 * 23.72810 * 1 2 3 32 32 H 1.09003 * 109.47328 * 143.72721 * 1 2 3 33 33 H 1.08994 * 109.47441 * 44.99825 * 5 4 3 34 34 H 0.96697 * 114.00285 * 300.00731 * 6 5 4 35 35 H 1.07997 * 125.02481 * 180.02562 * 11 4 3 36 36 H 0.96998 * 124.94279 * 180.02562 * 12 11 4 37 37 H 1.08003 * 119.31535 * 180.27253 * 15 14 13 38 38 H 0.97006 * 120.00311 * 359.97438 * 19 17 16 39 39 H 1.07997 * 126.21897 * 359.73848 * 21 20 19 40 40 H 1.08996 * 109.48017 * 210.00600 * 23 22 21 41 41 H 1.09008 * 109.46987 * 330.01000 * 23 22 21 42 42 H 1.08999 * 109.47002 * 59.99563 * 25 24 23 43 43 H 1.08993 * 109.46928 * 179.97438 * 25 24 23 44 44 H 1.09003 * 109.46819 * 300.00144 * 25 24 23 45 45 H 1.09002 * 109.47418 * 60.00534 * 26 24 23 46 46 H 1.09003 * 109.47164 * 180.02562 * 26 24 23 47 47 H 1.08996 * 109.47937 * 300.00414 * 26 24 23 48 48 H 1.09001 * 109.47433 * 59.99833 * 27 24 23 49 49 H 1.09003 * 109.46779 * 179.97438 * 27 24 23 50 50 H 1.09002 * 109.46921 * 299.99316 * 27 24 23 51 51 H 1.08003 * 125.82843 * 180.02562 * 29 28 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8516 2.6101 -0.0010 5 6 0.4526 3.1704 -0.0017 6 8 -0.1188 3.0232 -1.3031 7 14 0.5068 4.9766 0.4519 8 1 1.3348 5.7110 -0.5382 9 1 -0.8716 5.5288 0.4506 10 1 1.1007 5.1297 1.8043 11 6 2.9947 3.3126 -0.0010 12 7 4.0669 2.4606 0.0005 13 6 3.6347 1.1588 0.0009 14 7 4.2720 -0.0065 0.0017 15 6 3.6267 -1.1501 0.0071 16 6 2.2274 -1.1975 0.0005 17 6 1.5225 -2.4949 0.0005 18 8 0.3115 -2.5290 0.1058 19 7 2.2213 -3.6414 -0.1160 20 6 1.5495 -4.8780 -0.1165 21 6 2.1271 -6.1017 -0.2266 22 7 1.1356 -7.0286 -0.1778 23 6 1.3083 -8.4811 -0.2605 24 14 1.5425 -9.1771 1.4517 25 6 0.0456 -8.7879 2.4903 26 6 1.7628 -11.0240 1.3465 27 6 3.0537 -8.4152 2.2304 28 7 -0.0813 -6.3501 -0.0345 29 6 0.1646 -5.0656 0.0025 30 1 -0.3634 -0.1122 1.0216 31 1 -0.3634 0.9408 -0.4135 32 1 -0.3634 -0.8285 -0.6080 33 1 -0.1551 2.6314 0.7251 34 1 0.3712 3.4781 -2.0016 35 1 3.0597 4.3906 -0.0012 36 1 4.9965 2.7375 0.0011 37 1 4.1869 -2.0734 0.0120 38 1 3.1873 -3.6143 -0.2002 39 1 3.1830 -6.3017 -0.3334 40 1 0.4241 -8.9269 -0.7161 41 1 2.1841 -8.7088 -0.8682 42 1 -0.8386 -9.2335 2.0346 43 1 0.1824 -9.1954 3.4918 44 1 -0.0830 -7.7072 2.5517 45 1 2.6388 -11.2514 0.7389 46 1 1.8994 -11.4313 2.3483 47 1 0.8789 -11.4701 0.8907 48 1 2.9252 -7.3346 2.2919 49 1 3.1905 -8.8222 3.2323 50 1 3.9295 -8.6431 1.6227 51 1 -0.5728 -4.2835 0.1070 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:18:19 Heat of formation + Delta-G solvation = 51.586193 kcal Electronic energy + Delta-G solvation = -33071.181164 eV Core-core repulsion = 28710.873132 eV Total energy + Delta-G solvation = -4360.308032 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 387.164 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -42.86069 -42.15684 -40.59457 -38.70753 -37.77774 -36.00480 -34.80773 -33.62466 -31.96775 -31.41490 -30.02312 -29.62820 -28.73363 -28.53396 -28.40395 -27.02321 -26.38723 -24.71549 -23.97730 -22.75661 -21.95771 -21.13755 -20.58943 -19.25855 -18.72748 -18.25825 -17.68614 -17.40364 -16.86462 -16.64664 -16.41866 -16.26683 -15.86013 -15.76617 -15.47147 -15.22924 -15.01980 -14.84406 -14.39515 -14.32508 -14.27910 -14.12882 -13.92854 -13.83996 -13.73904 -13.70800 -13.53940 -13.47640 -13.38217 -13.21948 -13.19462 -13.13283 -12.87777 -12.44108 -12.20659 -12.06988 -11.82929 -11.57132 -11.26893 -11.04304 -11.00581 -10.98410 -10.89673 -10.42533 -10.16112 -9.93685 -9.63143 -9.15547 -8.46496 -0.24401 -0.06048 0.86958 1.09506 1.32004 1.35342 1.38290 1.48229 1.52605 1.60968 1.70514 1.75651 1.87571 1.90037 2.26341 2.31203 2.45198 2.89566 3.27007 3.44483 3.50969 3.60429 3.71834 3.74530 3.78881 3.95011 4.07918 4.19906 4.28959 4.37609 4.53036 4.56242 4.59405 4.61397 4.64694 4.66547 4.67401 4.71613 4.80335 4.80953 4.83641 4.86392 5.01115 5.06770 5.20280 5.25615 5.35868 5.43350 5.47388 5.59169 5.60957 5.79372 6.01411 6.09109 6.12032 6.47604 6.58151 6.85218 6.90588 7.26780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.090 3.910 3 C -0.147 4.147 4 C -0.178 4.178 5 C -0.051 4.051 6 O -0.536 6.536 7 Si 0.945 3.055 8 H -0.251 1.251 9 H -0.247 1.247 10 H -0.249 1.249 11 C 0.061 3.939 12 N -0.569 5.569 13 C 0.308 3.692 14 N -0.504 5.504 15 C 0.181 3.819 16 C -0.231 4.231 17 C 0.574 3.426 18 O -0.518 6.518 19 N -0.640 5.640 20 C -0.001 4.001 21 C 0.013 3.987 22 N -0.345 5.345 23 C -0.168 4.168 24 Si 1.019 2.981 25 C -0.446 4.446 26 C -0.450 4.450 27 C -0.450 4.450 28 N -0.283 5.283 29 C 0.048 3.952 30 H 0.083 0.917 31 H 0.086 0.914 32 H 0.100 0.900 33 H 0.119 0.881 34 H 0.375 0.625 35 H 0.180 0.820 36 H 0.425 0.575 37 H 0.162 0.838 38 H 0.407 0.593 39 H 0.176 0.824 40 H 0.104 0.896 41 H 0.098 0.902 42 H 0.070 0.930 43 H 0.068 0.932 44 H 0.071 0.929 45 H 0.071 0.929 46 H 0.075 0.925 47 H 0.072 0.928 48 H 0.070 0.930 49 H 0.073 0.927 50 H 0.070 0.930 51 H 0.206 0.794 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.416 0.969 0.024 5.502 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C 0.081 3.919 3 C -0.154 4.154 4 C -0.185 4.185 5 C -0.162 4.162 6 O -0.341 6.341 7 Si 0.767 3.233 8 H -0.175 1.175 9 H -0.171 1.171 10 H -0.172 1.172 11 C -0.066 4.066 12 N -0.175 5.175 13 C 0.075 3.925 14 N -0.217 5.217 15 C 0.012 3.988 16 C -0.239 4.239 17 C 0.363 3.637 18 O -0.395 6.395 19 N -0.285 5.285 20 C -0.105 4.105 21 C -0.135 4.135 22 N -0.127 5.127 23 C -0.334 4.334 24 Si 1.213 2.787 25 C -0.554 4.554 26 C -0.558 4.558 27 C -0.558 4.558 28 N -0.105 5.105 29 C -0.138 4.138 30 H 0.101 0.899 31 H 0.104 0.896 32 H 0.118 0.882 33 H 0.137 0.863 34 H 0.222 0.778 35 H 0.197 0.803 36 H 0.264 0.736 37 H 0.179 0.821 38 H 0.243 0.757 39 H 0.193 0.807 40 H 0.123 0.877 41 H 0.117 0.883 42 H 0.090 0.910 43 H 0.087 0.913 44 H 0.091 0.909 45 H 0.090 0.910 46 H 0.094 0.906 47 H 0.091 0.909 48 H 0.089 0.911 49 H 0.092 0.908 50 H 0.089 0.911 51 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 4.284 0.662 0.622 4.379 hybrid contribution 1.584 0.594 -0.601 1.795 sum 5.868 1.256 0.021 6.001 Atomic orbital electron populations 1.21314 0.88583 1.05288 1.03984 1.19923 0.97296 0.88977 0.85665 1.19434 0.92693 0.93447 1.09839 1.20670 0.95285 0.91169 1.11411 1.24395 0.90918 1.11488 0.89380 1.86530 1.53683 1.77717 1.16135 0.85796 0.82051 0.74352 0.81115 1.17503 1.17057 1.17229 1.21760 0.85277 0.95905 1.03646 1.41497 1.09556 1.02736 1.63704 1.18498 0.89398 0.85842 0.98757 1.66434 1.40531 0.95987 1.18721 1.22505 0.90047 0.94478 0.91779 1.20290 0.94667 0.93348 1.15550 1.17804 0.86740 0.82781 0.76385 1.90646 1.13502 1.86389 1.48981 1.42637 1.10161 1.03125 1.72619 1.17620 0.92448 0.84821 1.15660 1.21861 0.95478 0.87877 1.08333 1.47956 1.03832 1.05365 1.55594 1.26937 1.06743 0.78741 1.20974 0.79378 0.68057 0.66656 0.64578 1.26068 1.14593 1.05723 1.09054 1.26101 1.04979 1.19655 1.05086 1.26128 1.14610 1.07449 1.07587 1.77457 1.03848 1.05682 1.23556 1.24493 0.95049 0.93857 1.00434 0.89857 0.89558 0.88197 0.86318 0.77758 0.80275 0.73611 0.82095 0.75676 0.80732 0.87738 0.88349 0.91047 0.91270 0.90947 0.90987 0.90604 0.90875 0.91064 0.90787 0.91130 0.77800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -0.32 8.46 36.00 0.30 -0.02 16 2 C 0.09 0.24 5.98 -103.67 -0.62 -0.38 16 3 C -0.15 -0.33 6.16 -105.13 -0.65 -0.97 16 4 C -0.18 0.00 5.57 -102.73 -0.57 -0.58 16 5 C -0.05 0.05 1.88 36.01 0.07 0.12 16 6 O -0.54 0.20 11.67 -35.23 -0.41 -0.21 16 7 Si 0.95 -1.88 26.09 -169.99 -4.44 -6.31 16 8 H -0.25 0.66 7.03 56.52 0.40 1.06 16 9 H -0.25 0.04 7.11 56.52 0.40 0.45 16 10 H -0.25 0.31 7.11 56.52 0.40 0.71 16 11 C 0.06 -0.10 10.44 -16.70 -0.17 -0.28 16 12 N -0.57 0.49 6.04 -12.12 -0.07 0.41 16 13 C 0.31 0.63 8.42 -155.70 -1.31 -0.68 16 14 N -0.50 -1.15 10.37 -11.95 -0.12 -1.27 16 15 C 0.18 0.11 10.67 -17.11 -0.18 -0.07 16 16 C -0.23 -0.44 5.89 -104.83 -0.62 -1.06 16 17 C 0.57 1.42 7.69 -12.42 -0.10 1.32 16 18 O -0.52 -2.48 10.64 5.28 0.06 -2.43 16 19 N -0.64 -0.22 5.42 -10.94 -0.06 -0.28 16 20 C 0.00 0.00 6.90 -83.90 -0.58 -0.58 16 21 C 0.01 0.00 11.44 -16.67 -0.19 -0.19 16 22 N -0.34 -0.47 3.01 -9.17 -0.03 -0.49 16 23 C -0.17 0.28 5.59 59.85 0.33 0.62 16 24 Si 1.02 -2.90 12.79 -169.99 -2.17 -5.08 16 25 C -0.45 -0.01 8.65 101.05 0.87 0.87 16 26 C -0.45 1.21 8.65 101.05 0.87 2.09 16 27 C -0.45 0.95 8.65 101.05 0.87 1.82 16 28 N -0.28 -1.23 12.56 30.71 0.39 -0.84 16 29 C 0.05 0.21 10.84 -17.22 -0.19 0.02 16 30 H 0.08 0.18 8.14 -51.92 -0.42 -0.25 16 31 H 0.09 0.17 4.79 -51.93 -0.25 -0.07 16 32 H 0.10 0.37 5.95 -51.93 -0.31 0.06 16 33 H 0.12 -0.13 7.13 -51.93 -0.37 -0.50 16 34 H 0.38 -1.35 8.70 45.56 0.40 -0.96 16 35 H 0.18 -0.86 6.30 -52.49 -0.33 -1.19 16 36 H 0.43 -1.44 8.96 -40.82 -0.37 -1.81 16 37 H 0.16 -0.50 6.43 -52.48 -0.34 -0.84 16 38 H 0.41 -1.22 6.90 -40.82 -0.28 -1.50 16 39 H 0.18 -0.61 8.06 -52.49 -0.42 -1.03 16 40 H 0.10 -0.16 7.96 -51.93 -0.41 -0.57 16 41 H 0.10 -0.38 7.96 -51.92 -0.41 -0.79 16 42 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 43 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 44 H 0.07 0.14 7.96 -51.93 -0.41 -0.27 16 45 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 46 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 47 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 48 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 49 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 50 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 51 H 0.21 1.00 5.91 -52.48 -0.31 0.69 16 LS Contribution 416.59 15.07 6.28 6.28 Total: 0.00 -10.54 416.59 -8.78 -19.33 By element: Atomic # 1 Polarization: -4.79 SS G_CDS: -6.35 Total: -11.15 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: -1.85 Total: 2.05 kcal Atomic # 7 Polarization: -2.58 SS G_CDS: 0.10 Total: -2.48 kcal Atomic # 8 Polarization: -2.28 SS G_CDS: -0.35 Total: -2.64 kcal Atomic # 14 Polarization: -4.78 SS G_CDS: -6.61 Total: -11.39 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -10.54 -8.78 -19.33 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.911 kcal (2) G-P(sol) polarization free energy of solvation -10.543 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 60.369 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.782 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.325 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds