Wall clock time and date at job start Sun Mar 7 2021 10:23:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37690 * 119.95434 * 2 1 4 4 C 1.39753 * 119.90613 * 179.97438 * 3 2 1 5 5 C 1.47595 * 120.08571 * 179.97438 * 4 3 2 6 6 O 1.21609 * 120.00095 * 179.97438 * 5 4 3 7 7 N 1.34782 * 119.99906 * 0.02562 * 5 4 3 8 8 C 1.40709 * 119.99763 * 180.02562 * 7 5 4 9 9 C 1.35772 * 126.07913 * 179.97438 * 8 7 5 10 10 N 1.35822 * 107.55968 * 179.97438 * 9 8 7 11 11 C 1.46500 * 126.05387 * 179.97438 * 10 9 8 12 12 Si 1.86304 * 109.46756 * 90.00530 * 11 10 9 13 13 C 1.86301 * 109.47078 * 60.00278 * 12 11 10 14 14 C 1.86302 * 109.46954 * 179.97438 * 12 11 10 15 15 C 1.86295 * 109.47111 * 299.99985 * 12 11 10 16 16 N 1.40068 * 107.89532 * 0.02562 * 10 9 8 17 17 C 1.30835 * 108.37100 * 359.70901 * 16 10 9 18 18 C 1.39720 * 119.82659 * 359.97438 * 4 3 2 19 19 C 1.37715 * 119.90995 * 0.02562 * 18 4 3 20 20 C 1.50697 * 119.95709 * 180.02562 * 19 18 4 21 21 O 1.42897 * 109.47360 * 104.99755 * 20 19 18 22 22 Si 1.86299 * 109.47028 * 344.99978 * 20 19 18 23 23 H 1.48508 * 109.47193 * 299.99820 * 22 20 19 24 24 H 1.48500 * 109.47355 * 59.99760 * 22 20 19 25 25 H 1.48500 * 109.47331 * 180.02562 * 22 20 19 26 26 C 1.38979 * 120.09151 * 359.74198 * 19 18 4 27 27 O 1.35710 * 119.91551 * 180.25454 * 26 19 18 28 28 H 1.09002 * 109.47152 * 90.00075 * 1 2 3 29 29 H 1.09001 * 109.46980 * 330.00175 * 1 2 3 30 30 H 1.09004 * 109.47113 * 210.00156 * 1 2 3 31 31 H 1.08000 * 120.04161 * 359.95646 * 3 2 1 32 32 H 0.97001 * 119.99675 * 359.97438 * 7 5 4 33 33 H 1.07999 * 126.22249 * 359.97438 * 9 8 7 34 34 H 1.09002 * 109.47482 * 210.00165 * 11 10 9 35 35 H 1.09001 * 109.47454 * 330.00587 * 11 10 9 36 36 H 1.08994 * 109.46994 * 59.99772 * 13 12 11 37 37 H 1.09001 * 109.47156 * 179.97438 * 13 12 11 38 38 H 1.09008 * 109.46980 * 299.99495 * 13 12 11 39 39 H 1.09005 * 109.46914 * 60.00455 * 14 12 11 40 40 H 1.09001 * 109.46997 * 180.02562 * 14 12 11 41 41 H 1.08994 * 109.47441 * 300.00425 * 14 12 11 42 42 H 1.08995 * 109.47118 * 60.00314 * 15 12 11 43 43 H 1.09001 * 109.46990 * 179.97438 * 15 12 11 44 44 H 1.09001 * 109.47021 * 299.99894 * 15 12 11 45 45 H 1.08001 * 125.83484 * 180.29527 * 17 16 10 46 46 H 1.07997 * 120.04073 * 180.02562 * 18 4 3 47 47 H 1.09004 * 109.47536 * 225.00010 * 20 19 18 48 48 H 0.96703 * 114.00496 * 180.02562 * 21 20 19 49 49 H 0.96696 * 114.00052 * 270.25913 * 27 26 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1945 1.1930 0.0000 4 6 3.5921 1.1918 0.0005 5 6 4.3330 2.4683 0.0000 6 8 5.5491 2.4655 0.0009 7 7 3.6618 3.6371 -0.0005 8 6 4.3682 4.8540 -0.0016 9 6 3.8206 6.0964 -0.0027 10 7 4.8403 6.9936 -0.0030 11 6 4.7052 8.4524 -0.0046 12 14 4.6469 9.0725 1.7512 13 6 6.2183 8.5954 2.6309 14 6 4.4759 10.9277 1.7492 15 6 3.1890 8.3148 2.6293 16 7 6.0440 6.2773 -0.0026 17 6 5.7633 4.9994 0.0042 18 6 4.2860 -0.0209 0.0016 19 6 3.5909 -1.2098 0.0016 20 6 4.3383 -2.5184 0.0034 21 8 4.2703 -3.1041 1.3050 22 14 6.1200 -2.2165 -0.4494 23 1 6.1908 -1.6079 -1.8022 24 1 6.7331 -1.2950 0.5407 25 1 6.8564 -3.5061 -0.4483 26 6 2.2011 -1.2044 0.0060 27 8 1.5198 -2.3781 0.0112 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3633 0.8900 0.5138 30 1 -0.3633 -0.8900 0.5139 31 1 1.6545 2.1282 -0.0007 32 1 2.6918 3.6393 -0.0009 33 1 2.7660 6.3290 -0.0033 34 1 5.5582 8.8958 -0.5183 35 1 3.7858 8.7316 -0.5193 36 1 7.0712 9.0387 2.1171 37 1 6.1844 8.9586 3.6580 38 1 6.3188 7.5099 2.6321 39 1 3.5566 11.2072 1.2345 40 1 4.4422 11.2905 2.7765 41 1 5.3290 11.3707 1.2356 42 1 3.2895 7.2295 2.6305 43 1 3.1552 8.6772 3.6567 44 1 2.2696 8.5940 2.1146 45 1 6.4828 4.1940 0.0107 46 1 5.3659 -0.0258 0.0025 47 1 3.8883 -3.1948 -0.7234 48 1 4.7314 -3.9507 1.3800 49 1 1.3231 -2.7226 -0.8707 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:23:48 Heat of formation + Delta-G solvation = -39.245819 kcal Electronic energy + Delta-G solvation = -29988.151729 eV Core-core repulsion = 25848.064455 eV Total energy + Delta-G solvation = -4140.087274 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.157 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.29680 -41.50134 -40.15232 -37.76458 -37.52707 -35.90783 -34.12267 -33.67704 -32.03892 -30.20445 -29.66335 -28.57100 -28.43086 -28.10630 -27.17366 -26.73424 -24.83753 -22.62722 -22.18261 -21.79869 -20.80084 -19.55540 -18.67382 -18.49440 -18.19868 -17.42997 -16.64101 -16.55437 -16.45488 -16.07945 -15.80401 -15.68307 -15.13828 -14.99316 -14.85888 -14.41183 -14.36939 -14.31383 -14.29074 -14.08168 -13.93019 -13.78663 -13.71829 -13.54340 -13.51027 -13.40564 -13.24020 -13.15602 -13.01508 -12.94963 -12.62918 -12.13764 -12.09954 -11.75849 -11.62847 -11.48928 -11.32565 -11.03101 -10.92763 -10.89015 -10.32628 -9.99246 -9.98230 -9.69588 -8.53898 -0.40118 0.07086 0.81105 1.12427 1.30091 1.44956 1.46047 1.52307 1.60900 1.69298 1.85524 1.94563 2.11512 2.18802 2.42521 2.65733 3.02348 3.31626 3.52031 3.62166 3.68238 3.76601 3.90091 3.94483 4.11372 4.25873 4.30446 4.39017 4.49469 4.53362 4.57007 4.58893 4.59429 4.62013 4.62376 4.64056 4.72766 4.77232 4.78334 4.82029 4.99302 5.08800 5.10094 5.20493 5.27214 5.33572 5.40946 5.52147 5.58969 5.95630 6.05744 6.39238 6.53821 6.61754 6.84357 7.16274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.117 4.117 3 C -0.066 4.066 4 C -0.135 4.135 5 C 0.563 3.437 6 O -0.522 6.522 7 N -0.637 5.637 8 C -0.004 4.004 9 C 0.015 3.985 10 N -0.344 5.344 11 C -0.168 4.168 12 Si 1.019 2.981 13 C -0.446 4.446 14 C -0.450 4.450 15 C -0.450 4.450 16 N -0.281 5.281 17 C 0.048 3.952 18 C -0.051 4.051 19 C -0.107 4.107 20 C -0.069 4.069 21 O -0.537 6.537 22 Si 0.932 3.068 23 H -0.246 1.246 24 H -0.241 1.241 25 H -0.252 1.252 26 C 0.165 3.835 27 O -0.483 6.483 28 H 0.073 0.927 29 H 0.071 0.929 30 H 0.078 0.922 31 H 0.133 0.867 32 H 0.409 0.591 33 H 0.176 0.824 34 H 0.105 0.895 35 H 0.098 0.902 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.071 0.929 39 H 0.071 0.929 40 H 0.075 0.925 41 H 0.072 0.928 42 H 0.070 0.930 43 H 0.074 0.926 44 H 0.070 0.930 45 H 0.205 0.795 46 H 0.143 0.857 47 H 0.075 0.925 48 H 0.380 0.620 49 H 0.393 0.607 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.315 0.806 -2.203 6.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C -0.085 4.085 4 C -0.138 4.138 5 C 0.352 3.648 6 O -0.399 6.399 7 N -0.282 5.282 8 C -0.109 4.109 9 C -0.133 4.133 10 N -0.126 5.126 11 C -0.334 4.334 12 Si 1.213 2.787 13 C -0.555 4.555 14 C -0.558 4.558 15 C -0.558 4.558 16 N -0.104 5.104 17 C -0.139 4.139 18 C -0.069 4.069 19 C -0.108 4.108 20 C -0.180 4.180 21 O -0.343 6.343 22 Si 0.754 3.246 23 H -0.169 1.169 24 H -0.164 1.164 25 H -0.176 1.176 26 C 0.119 3.881 27 O -0.293 6.293 28 H 0.092 0.908 29 H 0.090 0.910 30 H 0.097 0.903 31 H 0.151 0.849 32 H 0.245 0.755 33 H 0.193 0.807 34 H 0.123 0.877 35 H 0.117 0.883 36 H 0.090 0.910 37 H 0.088 0.912 38 H 0.090 0.910 39 H 0.090 0.910 40 H 0.094 0.906 41 H 0.091 0.909 42 H 0.089 0.911 43 H 0.093 0.907 44 H 0.089 0.911 45 H 0.221 0.779 46 H 0.160 0.840 47 H 0.093 0.907 48 H 0.227 0.773 49 H 0.250 0.750 Dipole moment (debyes) X Y Z Total from point charges -3.997 2.523 -1.770 5.047 hybrid contribution -1.471 -1.265 -0.626 2.039 sum -5.468 1.258 -2.395 6.101 Atomic orbital electron populations 1.20737 0.89617 1.03913 1.02796 1.20185 0.97332 0.91995 1.02290 1.21086 0.92444 0.97906 0.97070 1.19615 0.93403 0.92851 1.07939 1.18081 0.87159 0.83085 0.76492 1.90694 1.13330 1.86908 1.48936 1.42616 1.09739 1.03052 1.72834 1.17632 0.92079 0.84995 1.16145 1.21861 0.95035 0.88174 1.08274 1.47980 1.03348 1.05365 1.55953 1.26955 1.06656 0.77859 1.21969 0.79384 0.68264 0.66857 0.64187 1.26070 1.15599 1.06080 1.07703 1.26097 1.04887 1.19717 1.05094 1.26125 1.13867 1.07386 1.08390 1.77466 1.04705 1.04448 1.23799 1.24489 0.94641 0.94316 1.00414 1.21070 1.00866 0.90227 0.94765 1.19572 0.93163 0.93973 1.04057 1.24505 1.09999 0.94086 0.89394 1.86554 1.79043 1.40411 1.28282 0.85945 0.75313 0.81617 0.81703 1.16875 1.16437 1.17617 1.18281 0.88649 0.85298 0.95878 1.84786 1.75602 1.35648 1.33296 0.90821 0.91028 0.90334 0.84948 0.75489 0.80680 0.87685 0.88309 0.91037 0.91228 0.90973 0.90981 0.90573 0.90863 0.91094 0.90736 0.91125 0.77852 0.84003 0.90729 0.77272 0.74954 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.27 9.79 36.01 0.35 0.62 16 2 C -0.12 0.04 5.89 -104.53 -0.62 -0.58 16 3 C -0.07 0.05 9.18 -39.22 -0.36 -0.31 16 4 C -0.13 -0.23 5.87 -104.96 -0.62 -0.84 16 5 C 0.56 1.70 7.74 -12.44 -0.10 1.60 16 6 O -0.52 -3.20 13.49 5.27 0.07 -3.12 16 7 N -0.64 -0.40 5.42 -10.96 -0.06 -0.45 16 8 C 0.00 -0.01 6.90 -83.90 -0.58 -0.59 16 9 C 0.01 0.00 11.44 -16.67 -0.19 -0.19 16 10 N -0.34 -0.48 3.01 -9.16 -0.03 -0.50 16 11 C -0.17 0.29 5.59 59.85 0.33 0.63 16 12 Si 1.02 -2.92 12.79 -169.99 -2.17 -5.09 16 13 C -0.45 -0.03 8.65 101.05 0.87 0.85 16 14 C -0.45 1.24 8.65 101.05 0.87 2.11 16 15 C -0.45 0.96 8.65 101.05 0.87 1.84 16 16 N -0.28 -1.28 12.56 30.71 0.39 -0.89 16 17 C 0.05 0.22 10.84 -17.22 -0.19 0.04 16 18 C -0.05 -0.13 8.20 -39.22 -0.32 -0.45 16 19 C -0.11 -0.18 5.30 -104.54 -0.55 -0.73 16 20 C -0.07 -0.01 2.36 36.00 0.08 0.07 16 21 O -0.54 -0.66 12.86 -35.23 -0.45 -1.11 16 22 Si 0.93 0.44 25.49 -169.99 -4.33 -3.90 16 23 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 24 H -0.24 -0.59 6.73 56.52 0.38 -0.21 16 25 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 26 C 0.16 0.14 6.66 -39.02 -0.26 -0.12 16 27 O -0.48 0.12 11.84 -18.83 -0.22 -0.10 16 28 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 29 H 0.07 -0.23 8.08 -51.93 -0.42 -0.65 16 30 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 31 H 0.13 -0.53 6.40 -52.49 -0.34 -0.86 16 32 H 0.41 -1.20 6.85 -40.82 -0.28 -1.48 16 33 H 0.18 -0.63 8.06 -52.49 -0.42 -1.05 16 34 H 0.10 -0.17 7.96 -51.93 -0.41 -0.58 16 35 H 0.10 -0.39 7.96 -51.93 -0.41 -0.81 16 36 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 37 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 38 H 0.07 0.15 7.96 -51.92 -0.41 -0.26 16 39 H 0.07 -0.23 7.96 -51.93 -0.41 -0.65 16 40 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 41 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 42 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 43 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 44 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 45 H 0.21 1.12 5.91 -52.49 -0.31 0.81 16 46 H 0.14 0.44 4.46 -52.49 -0.23 0.21 16 47 H 0.07 -0.16 7.83 -51.93 -0.41 -0.57 16 48 H 0.38 -1.24 8.74 45.56 0.40 -0.84 16 49 H 0.39 -1.96 9.06 45.56 0.41 -1.55 16 LS Contribution 408.76 15.07 6.16 6.16 Total: 0.00 -11.20 408.76 -6.81 -18.01 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -5.78 Total: -12.93 kcal Atomic # 6 Polarization: 4.32 SS G_CDS: -0.38 Total: 3.93 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: 0.30 Total: -1.85 kcal Atomic # 8 Polarization: -3.73 SS G_CDS: -0.60 Total: -4.33 kcal Atomic # 14 Polarization: -2.48 SS G_CDS: -6.51 Total: -8.99 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -11.20 -6.81 -18.01 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.233 kcal (2) G-P(sol) polarization free energy of solvation -11.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.012 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds