Wall clock time and date at job start Sun Mar 7 2021 10:23:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37690 * 119.95434 * 2 1 4 4 C 1.39753 * 119.90613 * 179.97438 * 3 2 1 5 5 C 1.47595 * 120.08571 * 179.97438 * 4 3 2 6 6 O 1.21609 * 120.00095 * 179.97438 * 5 4 3 7 7 N 1.34782 * 119.99906 * 0.02562 * 5 4 3 8 8 C 1.40709 * 119.99763 * 180.02562 * 7 5 4 9 9 C 1.35772 * 126.07913 * 179.97438 * 8 7 5 10 10 N 1.35822 * 107.55968 * 179.97438 * 9 8 7 11 11 C 1.46500 * 126.05387 * 179.97438 * 10 9 8 12 12 Si 1.86304 * 109.46756 * 90.00530 * 11 10 9 13 13 C 1.86301 * 109.47078 * 60.00278 * 12 11 10 14 14 C 1.86302 * 109.46954 * 179.97438 * 12 11 10 15 15 C 1.86295 * 109.47111 * 299.99985 * 12 11 10 16 16 N 1.40068 * 107.89532 * 0.02562 * 10 9 8 17 17 C 1.30835 * 108.37100 * 359.70901 * 16 10 9 18 18 C 1.39720 * 119.82659 * 359.97438 * 4 3 2 19 19 C 1.37715 * 119.90995 * 0.02562 * 18 4 3 20 20 C 1.50697 * 119.95709 * 180.02562 * 19 18 4 21 21 O 1.42897 * 109.47360 * 104.99755 * 20 19 18 22 22 Si 1.86299 * 109.47028 * 344.99978 * 20 19 18 23 23 H 1.48508 * 109.47193 * 299.99820 * 22 20 19 24 24 H 1.48500 * 109.47355 * 59.99760 * 22 20 19 25 25 H 1.48500 * 109.47331 * 180.02562 * 22 20 19 26 26 C 1.38979 * 120.09151 * 359.74198 * 19 18 4 27 27 O 1.35710 * 119.91551 * 180.25454 * 26 19 18 28 28 H 1.09002 * 109.47152 * 90.00075 * 1 2 3 29 29 H 1.09001 * 109.46980 * 330.00175 * 1 2 3 30 30 H 1.09004 * 109.47113 * 210.00156 * 1 2 3 31 31 H 1.08000 * 120.04161 * 359.95646 * 3 2 1 32 32 H 0.97001 * 119.99675 * 359.97438 * 7 5 4 33 33 H 1.07999 * 126.22249 * 359.97438 * 9 8 7 34 34 H 1.09002 * 109.47482 * 210.00165 * 11 10 9 35 35 H 1.09001 * 109.47454 * 330.00587 * 11 10 9 36 36 H 1.08994 * 109.46994 * 59.99772 * 13 12 11 37 37 H 1.09001 * 109.47156 * 179.97438 * 13 12 11 38 38 H 1.09008 * 109.46980 * 299.99495 * 13 12 11 39 39 H 1.09005 * 109.46914 * 60.00455 * 14 12 11 40 40 H 1.09001 * 109.46997 * 180.02562 * 14 12 11 41 41 H 1.08994 * 109.47441 * 300.00425 * 14 12 11 42 42 H 1.08995 * 109.47118 * 60.00314 * 15 12 11 43 43 H 1.09001 * 109.46990 * 179.97438 * 15 12 11 44 44 H 1.09001 * 109.47021 * 299.99894 * 15 12 11 45 45 H 1.08001 * 125.83484 * 180.29527 * 17 16 10 46 46 H 1.07997 * 120.04073 * 180.02562 * 18 4 3 47 47 H 1.09004 * 109.47536 * 225.00010 * 20 19 18 48 48 H 0.96703 * 114.00496 * 180.02562 * 21 20 19 49 49 H 0.96696 * 114.00052 * 270.25913 * 27 26 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1945 1.1930 0.0000 4 6 3.5921 1.1918 0.0005 5 6 4.3330 2.4683 0.0000 6 8 5.5491 2.4655 0.0009 7 7 3.6618 3.6371 -0.0005 8 6 4.3682 4.8540 -0.0016 9 6 3.8206 6.0964 -0.0027 10 7 4.8403 6.9936 -0.0030 11 6 4.7052 8.4524 -0.0046 12 14 4.6469 9.0725 1.7512 13 6 6.2183 8.5954 2.6309 14 6 4.4759 10.9277 1.7492 15 6 3.1890 8.3148 2.6293 16 7 6.0440 6.2773 -0.0026 17 6 5.7633 4.9994 0.0042 18 6 4.2860 -0.0209 0.0016 19 6 3.5909 -1.2098 0.0016 20 6 4.3383 -2.5184 0.0034 21 8 4.2703 -3.1041 1.3050 22 14 6.1200 -2.2165 -0.4494 23 1 6.1908 -1.6079 -1.8022 24 1 6.7331 -1.2950 0.5407 25 1 6.8564 -3.5061 -0.4483 26 6 2.2011 -1.2044 0.0060 27 8 1.5198 -2.3781 0.0112 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3633 0.8900 0.5138 30 1 -0.3633 -0.8900 0.5139 31 1 1.6545 2.1282 -0.0007 32 1 2.6918 3.6393 -0.0009 33 1 2.7660 6.3290 -0.0033 34 1 5.5582 8.8958 -0.5183 35 1 3.7858 8.7316 -0.5193 36 1 7.0712 9.0387 2.1171 37 1 6.1844 8.9586 3.6580 38 1 6.3188 7.5099 2.6321 39 1 3.5566 11.2072 1.2345 40 1 4.4422 11.2905 2.7765 41 1 5.3290 11.3707 1.2356 42 1 3.2895 7.2295 2.6305 43 1 3.1552 8.6772 3.6567 44 1 2.2696 8.5940 2.1146 45 1 6.4828 4.1940 0.0107 46 1 5.3659 -0.0258 0.0025 47 1 3.8883 -3.1948 -0.7234 48 1 4.7314 -3.9507 1.3800 49 1 1.3231 -2.7226 -0.8707 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608520_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:23:47 Heat of formation + Delta-G solvation = -40.790436 kcal Electronic energy + Delta-G solvation = -29988.218708 eV Core-core repulsion = 25848.064455 eV Total energy + Delta-G solvation = -4140.154253 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.157 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.42503 -41.53359 -40.27349 -37.76469 -37.52723 -36.07159 -34.08432 -33.75564 -32.08100 -30.26835 -29.51465 -28.38358 -28.33625 -27.98632 -27.17973 -26.73265 -24.93075 -22.75749 -22.20575 -21.81311 -20.93679 -19.51783 -18.74559 -18.52100 -18.27340 -17.44338 -16.69414 -16.62691 -16.48681 -16.12095 -15.93432 -15.77155 -15.22929 -15.04630 -14.87778 -14.32890 -14.25889 -14.18609 -14.15876 -14.02290 -13.86079 -13.83317 -13.65415 -13.49740 -13.42127 -13.21468 -13.14320 -13.02446 -12.91543 -12.85692 -12.64266 -12.21530 -12.21245 -11.89819 -11.78309 -11.44694 -11.39726 -11.12019 -10.85243 -10.80740 -10.34167 -10.04987 -9.97559 -9.70096 -8.64159 -0.43780 0.06384 0.77030 1.08256 1.32766 1.35740 1.36940 1.42145 1.66385 1.85897 1.86754 1.95515 1.99870 2.17772 2.57186 2.58619 3.11192 3.35774 3.52134 3.65856 3.72935 3.82781 3.96282 3.99591 4.15764 4.25715 4.36716 4.44411 4.54851 4.64286 4.67630 4.69729 4.71758 4.74276 4.75939 4.83059 4.84325 4.87186 4.87282 4.88728 5.01977 5.07709 5.09959 5.23699 5.33762 5.50559 5.60494 5.61556 5.65696 5.73947 6.06447 6.36845 6.66821 6.76750 6.82319 7.06884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.119 4.119 3 C -0.054 4.054 4 C -0.148 4.148 5 C 0.556 3.444 6 O -0.567 6.567 7 N -0.619 5.619 8 C -0.027 4.027 9 C 0.037 3.963 10 N -0.339 5.339 11 C -0.190 4.190 12 Si 1.094 2.906 13 C -0.477 4.477 14 C -0.454 4.454 15 C -0.458 4.458 16 N -0.318 5.318 17 C 0.021 3.979 18 C -0.074 4.074 19 C -0.124 4.124 20 C -0.060 4.060 21 O -0.558 6.558 22 Si 0.955 3.045 23 H -0.261 1.261 24 H -0.283 1.283 25 H -0.243 1.243 26 C 0.164 3.836 27 O -0.491 6.491 28 H 0.089 0.911 29 H 0.086 0.914 30 H 0.070 0.930 31 H 0.169 0.831 32 H 0.428 0.572 33 H 0.225 0.775 34 H 0.103 0.897 35 H 0.135 0.865 36 H 0.061 0.939 37 H 0.068 0.932 38 H 0.044 0.956 39 H 0.086 0.914 40 H 0.073 0.927 41 H 0.071 0.929 42 H 0.060 0.940 43 H 0.071 0.929 44 H 0.090 0.910 45 H 0.181 0.819 46 H 0.122 0.878 47 H 0.104 0.896 48 H 0.397 0.603 49 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.444 1.842 -2.853 10.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.120 4.120 3 C -0.073 4.073 4 C -0.151 4.151 5 C 0.346 3.654 6 O -0.447 6.447 7 N -0.265 5.265 8 C -0.131 4.131 9 C -0.112 4.112 10 N -0.121 5.121 11 C -0.353 4.353 12 Si 1.283 2.717 13 C -0.580 4.580 14 C -0.563 4.563 15 C -0.566 4.566 16 N -0.142 5.142 17 C -0.164 4.164 18 C -0.093 4.093 19 C -0.125 4.125 20 C -0.172 4.172 21 O -0.367 6.367 22 Si 0.781 3.219 23 H -0.185 1.185 24 H -0.209 1.209 25 H -0.166 1.166 26 C 0.118 3.882 27 O -0.305 6.305 28 H 0.108 0.892 29 H 0.105 0.895 30 H 0.089 0.911 31 H 0.186 0.814 32 H 0.268 0.732 33 H 0.241 0.759 34 H 0.121 0.879 35 H 0.153 0.847 36 H 0.081 0.919 37 H 0.087 0.913 38 H 0.063 0.937 39 H 0.105 0.895 40 H 0.093 0.907 41 H 0.090 0.910 42 H 0.079 0.921 43 H 0.090 0.910 44 H 0.109 0.891 45 H 0.197 0.803 46 H 0.139 0.861 47 H 0.122 0.878 48 H 0.248 0.752 49 H 0.274 0.726 Dipole moment (debyes) X Y Z Total from point charges -8.112 3.521 -2.428 9.170 hybrid contribution -0.146 -1.515 -0.387 1.571 sum -8.258 2.005 -2.816 8.952 Atomic orbital electron populations 1.20780 0.87733 1.04270 1.03915 1.20485 0.98588 0.91530 1.01376 1.21401 0.91162 0.99484 0.95211 1.19598 0.94566 0.91692 1.09252 1.18407 0.86817 0.84144 0.76047 1.90683 1.15325 1.87530 1.51159 1.42420 1.10498 1.01914 1.71685 1.17781 0.91297 0.86374 1.17644 1.22566 0.96626 0.86783 1.05221 1.48307 1.02759 1.06591 1.54440 1.27410 1.08357 0.75955 1.23597 0.78271 0.65047 0.66296 0.62047 1.26534 1.18653 1.04203 1.08647 1.26131 1.05633 1.19283 1.05236 1.26215 1.15081 1.06702 1.08608 1.77392 1.06800 1.04683 1.25349 1.24296 0.95997 0.94162 1.01977 1.21076 1.00225 0.91531 0.96448 1.19733 0.94016 0.94011 1.04709 1.24395 1.08813 0.94277 0.89691 1.86504 1.79453 1.41791 1.28919 0.85646 0.76254 0.80470 0.79484 1.18493 1.20916 1.16642 1.18395 0.88306 0.86210 0.95295 1.84732 1.75234 1.35309 1.35203 0.89213 0.89547 0.91097 0.81369 0.73239 0.75883 0.87891 0.84716 0.91931 0.91291 0.93653 0.89511 0.90745 0.90960 0.92121 0.91018 0.89090 0.80254 0.86065 0.87782 0.75239 0.72579 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.79 9.79 71.24 0.70 1.49 16 2 C -0.12 0.24 5.89 -19.81 -0.12 0.12 16 3 C -0.05 0.14 9.18 22.51 0.21 0.34 16 4 C -0.15 -0.71 5.87 -20.08 -0.12 -0.83 16 5 C 0.56 4.64 7.74 86.71 0.67 5.31 16 6 O -0.57 -9.53 13.49 -4.06 -0.05 -9.58 16 7 N -0.62 -0.98 5.42 -306.83 -1.66 -2.64 16 8 C -0.03 -0.14 6.90 37.63 0.26 0.12 16 9 C 0.04 -0.04 11.44 83.50 0.96 0.92 16 10 N -0.34 -0.84 3.01 -182.91 -0.55 -1.39 16 11 C -0.19 0.95 5.59 127.77 0.71 1.67 16 12 Si 1.09 -7.33 12.79 68.60 0.88 -6.46 16 13 C -0.48 -0.99 8.65 113.37 0.98 -0.01 16 14 C -0.45 3.33 8.65 113.37 0.98 4.32 16 15 C -0.46 2.85 8.65 113.37 0.98 3.83 16 16 N -0.32 -3.64 12.56 -56.76 -0.71 -4.35 16 17 C 0.02 0.26 10.84 85.33 0.92 1.18 16 18 C -0.07 -0.58 8.20 22.50 0.18 -0.40 16 19 C -0.12 -0.55 5.30 -19.81 -0.11 -0.66 16 20 C -0.06 -0.07 2.36 71.24 0.17 0.10 16 21 O -0.56 -1.67 12.86 -148.98 -1.92 -3.58 16 22 Si 0.96 3.30 25.49 68.60 1.75 5.05 16 23 H -0.26 -1.42 7.11 99.48 0.71 -0.72 16 24 H -0.28 -2.86 6.73 99.48 0.67 -2.19 16 25 H -0.24 -0.35 7.11 99.48 0.71 0.35 16 26 C 0.16 0.20 6.66 22.63 0.15 0.35 16 27 O -0.49 0.84 11.84 -90.31 -1.07 -0.23 16 28 H 0.09 -0.90 8.14 -2.39 -0.02 -0.91 16 29 H 0.09 -0.84 8.08 -2.39 -0.02 -0.86 16 30 H 0.07 -0.35 7.52 -2.38 -0.02 -0.36 16 31 H 0.17 -1.82 6.40 -2.91 -0.02 -1.84 16 32 H 0.43 -3.22 6.85 -92.71 -0.63 -3.86 16 33 H 0.22 -2.61 8.06 -2.91 -0.02 -2.63 16 34 H 0.10 -0.40 7.96 -2.39 -0.02 -0.42 16 35 H 0.13 -1.60 7.96 -2.39 -0.02 -1.62 16 36 H 0.06 0.19 7.96 -2.39 -0.02 0.18 16 37 H 0.07 0.09 7.96 -2.39 -0.02 0.07 16 38 H 0.04 0.33 7.96 -2.38 -0.02 0.32 16 39 H 0.09 -0.84 7.96 -2.38 -0.02 -0.86 16 40 H 0.07 -0.47 7.96 -2.39 -0.02 -0.49 16 41 H 0.07 -0.48 7.96 -2.39 -0.02 -0.50 16 42 H 0.06 -0.21 7.96 -2.39 -0.02 -0.23 16 43 H 0.07 -0.36 7.96 -2.39 -0.02 -0.38 16 44 H 0.09 -0.90 7.96 -2.39 -0.02 -0.92 16 45 H 0.18 3.00 5.91 -2.91 -0.02 2.98 16 46 H 0.12 1.35 4.46 -2.91 -0.01 1.33 16 47 H 0.10 -0.53 7.83 -2.38 -0.02 -0.55 16 48 H 0.40 -2.50 8.74 -74.06 -0.65 -3.15 16 49 H 0.41 -4.79 9.06 -74.06 -0.67 -5.46 16 Total: 0.00 -32.04 408.76 3.97 -28.07 By element: Atomic # 1 Polarization: -22.49 SS G_CDS: -0.23 Total: -22.72 kcal Atomic # 6 Polarization: 10.31 SS G_CDS: 7.54 Total: 17.85 kcal Atomic # 7 Polarization: -5.46 SS G_CDS: -2.93 Total: -8.39 kcal Atomic # 8 Polarization: -10.36 SS G_CDS: -3.04 Total: -13.40 kcal Atomic # 14 Polarization: -4.04 SS G_CDS: 2.63 Total: -1.41 kcal Total: -32.04 3.97 -28.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.723 kcal (2) G-P(sol) polarization free energy of solvation -32.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.068 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds