Wall clock time and date at job start Sun Mar 7 2021 10:24:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36408 * 125.80467 * 2 1 4 4 C 1.47381 * 127.19461 * 0.06135 * 3 2 1 5 5 O 1.21639 * 119.99601 * 359.97431 * 4 3 2 6 6 N 1.34769 * 120.00204 * 179.97438 * 4 3 2 7 7 C 1.40746 * 119.99832 * 180.02562 * 6 4 3 8 8 C 1.35756 * 126.08059 * 180.02562 * 7 6 4 9 9 N 1.35830 * 107.56326 * 180.02562 * 8 7 6 10 10 C 1.46492 * 126.05910 * 179.97438 * 9 8 7 11 11 Si 1.86302 * 109.46898 * 90.00119 * 10 9 8 12 12 C 1.86300 * 109.47216 * 59.99941 * 11 10 9 13 13 C 1.86294 * 109.47236 * 180.02562 * 11 10 9 14 14 C 1.86303 * 109.47234 * 300.00140 * 11 10 9 15 15 N 1.40076 * 107.88809 * 359.97438 * 9 8 7 16 16 C 1.30837 * 108.36763 * 359.71876 * 15 9 8 17 17 C 1.47020 * 105.62054 * 180.02562 * 3 2 1 18 18 C 1.34184 * 105.95357 * 359.97438 * 17 3 2 19 19 C 1.50700 * 125.43720 * 179.97438 * 18 17 3 20 20 O 1.42904 * 109.47044 * 300.00136 * 19 18 17 21 21 Si 1.86292 * 109.47270 * 180.02562 * 19 18 17 22 22 H 1.48504 * 109.47120 * 59.99800 * 21 19 18 23 23 H 1.48496 * 109.47382 * 179.97438 * 21 19 18 24 24 H 1.48505 * 109.46942 * 299.99980 * 21 19 18 25 25 O 1.33672 * 125.80158 * 180.02562 * 2 1 3 26 26 H 1.08996 * 109.47415 * 180.02562 * 1 2 3 27 27 H 1.09007 * 109.47055 * 300.00214 * 1 2 3 28 28 H 1.08998 * 109.46985 * 60.00084 * 1 2 3 29 29 H 0.96996 * 120.00419 * 359.97438 * 6 4 3 30 30 H 1.08000 * 126.21899 * 359.97438 * 8 7 6 31 31 H 1.08995 * 109.47492 * 210.00236 * 10 9 8 32 32 H 1.08995 * 109.47561 * 330.00374 * 10 9 8 33 33 H 1.09002 * 109.47106 * 60.00030 * 12 11 10 34 34 H 1.09003 * 109.47357 * 179.97438 * 12 11 10 35 35 H 1.09000 * 109.47238 * 300.00070 * 12 11 10 36 36 H 1.09004 * 109.47422 * 60.00385 * 13 11 10 37 37 H 1.09004 * 109.47464 * 179.97438 * 13 11 10 38 38 H 1.09000 * 109.47712 * 300.00121 * 13 11 10 39 39 H 1.09000 * 109.47113 * 59.99995 * 14 11 10 40 40 H 1.09000 * 109.47353 * 179.97438 * 14 11 10 41 41 H 1.08999 * 109.46909 * 300.00334 * 14 11 10 42 42 H 1.08004 * 125.82860 * 180.25622 * 16 15 9 43 43 H 1.07999 * 127.02375 * 180.26021 * 17 3 2 44 44 H 1.09006 * 109.47066 * 59.99783 * 19 18 17 45 45 H 0.96697 * 114.00267 * 299.99962 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1063 0.0000 4 6 1.8741 2.5157 0.0013 5 8 0.6889 2.7892 0.0020 6 7 2.7932 3.5014 0.0016 7 6 2.3816 4.8473 0.0033 8 6 3.1970 5.9327 0.0034 9 7 2.4078 7.0382 0.0059 10 6 2.8706 8.4281 0.0074 11 14 3.0647 9.0198 -1.7485 12 6 1.4242 8.9125 -2.6249 13 6 3.6541 10.7871 -1.7467 14 6 4.3106 7.9512 -2.6298 15 7 1.0728 6.6139 0.0069 16 6 1.0561 5.3057 -0.0011 17 6 3.6849 0.5990 -0.0006 18 6 3.5859 -0.7392 -0.0004 19 6 4.7460 -1.7011 -0.0014 20 8 5.5415 -1.4868 -1.1690 21 14 4.1029 -3.4495 -0.0013 22 1 3.2741 -3.6722 -1.2133 23 1 5.2459 -4.3975 -0.0029 24 1 3.2758 -3.6727 1.2118 25 8 2.2890 -1.0841 -0.0005 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 3.7383 3.2833 0.0014 30 1 4.2769 5.9196 0.0025 31 1 2.1418 9.0533 0.5230 32 1 3.8304 8.4909 0.5201 33 1 0.6953 9.5377 -2.1093 34 1 1.5377 9.2591 -3.6521 35 1 1.0798 7.8783 -2.6259 36 1 4.6141 10.8495 -1.2341 37 1 3.7681 11.1331 -2.7740 38 1 2.9255 11.4126 -1.2309 39 1 3.9662 6.9171 -2.6309 40 1 4.4238 8.2971 -3.6572 41 1 5.2704 8.0140 -2.1170 42 1 0.1724 4.6847 -0.0064 43 1 4.5928 1.1839 0.0031 44 1 5.3546 -1.5374 0.8880 45 1 5.0636 -1.6153 -1.9997 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:24:37 Heat of formation + Delta-G solvation = -12.403278 kcal Electronic energy + Delta-G solvation = -26536.327122 eV Core-core repulsion = 22681.167587 eV Total energy + Delta-G solvation = -3855.159534 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 337.142 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -43.77120 -42.16310 -40.14114 -38.12639 -35.79374 -34.25169 -33.48085 -33.11726 -30.45848 -29.69334 -29.34852 -28.55946 -28.42712 -27.15374 -25.77770 -24.34847 -22.81418 -22.30526 -21.27584 -20.37779 -18.92584 -18.25581 -17.94333 -17.71679 -16.72345 -16.69837 -16.46155 -16.00248 -15.97063 -15.49770 -15.08772 -14.95639 -14.56043 -14.34178 -14.29607 -14.21910 -14.06759 -14.00800 -13.92128 -13.83586 -13.73359 -13.50794 -13.39791 -13.23379 -13.14979 -12.96049 -12.86362 -12.24794 -12.12979 -12.10516 -11.60566 -11.29221 -11.02229 -10.97293 -10.91570 -10.88057 -10.64564 -9.96414 -9.60503 -8.49649 0.24010 0.73058 0.92055 0.99116 1.29947 1.35926 1.40800 1.52687 1.67581 1.69911 1.85894 1.89638 1.90477 2.29763 2.43317 2.55803 3.12020 3.35653 3.67178 3.74146 3.76022 3.93797 4.08793 4.26160 4.33490 4.39537 4.50951 4.57835 4.58829 4.59845 4.61150 4.63219 4.64998 4.70185 4.78260 4.78602 4.81329 4.83407 5.08183 5.19204 5.25681 5.34367 5.41857 5.58912 5.88685 5.98767 6.08815 6.29018 6.47931 6.87244 7.24538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.099 3.901 3 C -0.251 4.251 4 C 0.595 3.405 5 O -0.528 6.528 6 N -0.636 5.636 7 C -0.002 4.002 8 C 0.013 3.987 9 N -0.344 5.344 10 C -0.168 4.168 11 Si 1.019 2.981 12 C -0.446 4.446 13 C -0.450 4.450 14 C -0.450 4.450 15 N -0.282 5.282 16 C 0.047 3.953 17 C -0.146 4.146 18 C -0.058 4.058 19 C -0.040 4.040 20 O -0.529 6.529 21 Si 0.956 3.044 22 H -0.248 1.248 23 H -0.245 1.245 24 H -0.246 1.246 25 O -0.172 6.172 26 H 0.079 0.921 27 H 0.100 0.900 28 H 0.101 0.899 29 H 0.410 0.590 30 H 0.175 0.825 31 H 0.104 0.896 32 H 0.098 0.902 33 H 0.070 0.930 34 H 0.068 0.932 35 H 0.071 0.929 36 H 0.071 0.929 37 H 0.075 0.925 38 H 0.072 0.928 39 H 0.070 0.930 40 H 0.073 0.927 41 H 0.070 0.930 42 H 0.205 0.795 43 H 0.160 0.840 44 H 0.137 0.863 45 H 0.382 0.618 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.401 -0.181 -0.636 4.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C 0.045 3.955 3 C -0.256 4.256 4 C 0.384 3.616 5 O -0.406 6.406 6 N -0.280 5.280 7 C -0.106 4.106 8 C -0.135 4.135 9 N -0.127 5.127 10 C -0.334 4.334 11 Si 1.213 2.787 12 C -0.554 4.554 13 C -0.558 4.558 14 C -0.558 4.558 15 N -0.105 5.105 16 C -0.139 4.139 17 C -0.166 4.166 18 C -0.106 4.106 19 C -0.150 4.150 20 O -0.334 6.334 21 Si 0.775 3.225 22 H -0.171 1.171 23 H -0.168 1.168 24 H -0.169 1.169 25 O -0.069 6.069 26 H 0.098 0.902 27 H 0.119 0.881 28 H 0.119 0.881 29 H 0.245 0.755 30 H 0.193 0.807 31 H 0.123 0.877 32 H 0.117 0.883 33 H 0.090 0.910 34 H 0.088 0.912 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.094 0.906 38 H 0.091 0.909 39 H 0.089 0.911 40 H 0.092 0.908 41 H 0.089 0.911 42 H 0.222 0.778 43 H 0.178 0.822 44 H 0.155 0.845 45 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 2.967 0.131 -0.121 2.973 hybrid contribution 1.025 -0.250 -0.198 1.074 sum 3.992 -0.119 -0.319 4.007 Atomic orbital electron populations 1.20590 0.83200 1.04106 1.05632 1.22893 0.94091 0.82757 0.95746 1.20961 0.93369 0.93281 1.17950 1.17075 0.85100 0.83418 0.76001 1.90684 1.16562 1.83431 1.49925 1.42502 1.09981 1.02613 1.72917 1.17636 0.93438 0.83654 1.15889 1.21857 0.97461 0.85774 1.08408 1.47963 1.03776 1.04894 1.56077 1.26944 1.03425 0.81112 1.21943 0.79379 0.68056 0.67023 0.64210 1.26067 1.16605 1.05086 1.07660 1.26099 1.06221 1.18403 1.05082 1.26127 1.11294 1.09956 1.08391 1.77456 0.96488 1.12736 1.23839 1.24476 0.97698 0.91199 1.00527 1.22576 0.96387 0.93461 1.04129 1.22661 0.82828 0.95801 1.09283 1.24367 0.90463 1.07444 0.92761 1.86569 1.38236 1.93328 1.15306 0.85533 0.80114 0.73987 0.82820 1.17132 1.16806 1.16929 1.83693 1.16537 1.35147 1.71524 0.90199 0.88118 0.88110 0.75516 0.80749 0.87719 0.88340 0.91039 0.91244 0.90977 0.90983 0.90585 0.90866 0.91106 0.90760 0.91126 0.77846 0.82203 0.84545 0.77030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.03 9.14 36.01 0.33 0.36 16 2 C 0.10 0.14 7.37 -34.97 -0.26 -0.12 16 3 C -0.25 -0.39 6.31 -103.28 -0.65 -1.05 16 4 C 0.59 1.64 7.78 -12.54 -0.10 1.54 16 5 O -0.53 -2.61 12.81 5.24 0.07 -2.55 16 6 N -0.64 -0.60 5.47 -11.02 -0.06 -0.66 16 7 C 0.00 0.00 6.90 -83.89 -0.58 -0.58 16 8 C 0.01 0.01 11.44 -16.67 -0.19 -0.18 16 9 N -0.34 -0.51 3.01 -9.17 -0.03 -0.54 16 10 C -0.17 0.27 5.59 59.84 0.33 0.61 16 11 Si 1.02 -2.89 12.79 -169.99 -2.17 -5.06 16 12 C -0.45 0.01 8.65 101.05 0.87 0.88 16 13 C -0.45 1.22 8.65 101.05 0.87 2.09 16 14 C -0.45 0.92 8.65 101.05 0.87 1.80 16 15 N -0.28 -1.26 12.57 30.71 0.39 -0.87 16 16 C 0.05 0.21 10.83 -17.22 -0.19 0.02 16 17 C -0.15 0.03 10.46 -37.45 -0.39 -0.37 16 18 C -0.06 0.00 6.20 -35.74 -0.22 -0.22 16 19 C -0.04 0.07 2.98 36.01 0.11 0.18 16 20 O -0.53 0.80 12.86 -35.23 -0.45 0.35 16 21 Si 0.96 -1.17 27.37 -169.99 -4.65 -5.83 16 22 H -0.25 0.07 7.11 56.52 0.40 0.47 16 23 H -0.24 0.10 7.11 56.52 0.40 0.51 16 24 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 25 O -0.17 -0.21 8.89 7.62 0.07 -0.14 16 26 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 27 H 0.10 -0.02 8.08 -51.93 -0.42 -0.44 16 28 H 0.10 -0.03 8.08 -51.93 -0.42 -0.45 16 29 H 0.41 -0.83 8.00 -40.82 -0.33 -1.16 16 30 H 0.18 -0.54 8.06 -52.49 -0.42 -0.96 16 31 H 0.10 -0.16 7.96 -51.93 -0.41 -0.57 16 32 H 0.10 -0.37 7.96 -51.93 -0.41 -0.79 16 33 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 34 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 35 H 0.07 0.14 7.96 -51.93 -0.41 -0.27 16 36 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 37 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 38 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 39 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 41 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 42 H 0.21 1.02 5.91 -52.48 -0.31 0.71 16 43 H 0.16 -0.40 7.74 -52.49 -0.41 -0.80 16 44 H 0.14 -0.46 7.96 -51.93 -0.41 -0.87 16 45 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 LS Contribution 386.33 15.07 5.82 5.82 Total: 0.00 -8.65 386.33 -6.30 -14.95 By element: Atomic # 1 Polarization: -4.35 SS G_CDS: -6.09 Total: -10.44 kcal Atomic # 6 Polarization: 4.15 SS G_CDS: 0.82 Total: 4.97 kcal Atomic # 7 Polarization: -2.37 SS G_CDS: 0.30 Total: -2.07 kcal Atomic # 8 Polarization: -2.03 SS G_CDS: -0.32 Total: -2.34 kcal Atomic # 14 Polarization: -4.06 SS G_CDS: -6.83 Total: -10.89 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -8.65 -6.30 -14.95 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.548 kcal (2) G-P(sol) polarization free energy of solvation -8.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.951 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds