Wall clock time and date at job start Sun Mar 7 2021 10:33:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86297 * 1 3 3 C 1.86301 * 109.47203 * 2 1 4 4 C 1.86294 * 109.47405 * 239.99893 * 2 1 3 5 5 C 1.86304 * 109.47350 * 119.99872 * 2 1 3 6 6 N 1.46498 * 109.46809 * 59.99851 * 5 2 1 7 7 C 1.35837 * 126.05307 * 90.00590 * 6 5 2 8 8 C 1.35756 * 107.55852 * 179.97438 * 7 6 5 9 9 N 1.40760 * 126.07833 * 180.02562 * 8 7 6 10 10 C 1.34773 * 119.99697 * 179.97438 * 9 8 7 11 11 O 1.21678 * 120.00345 * 359.97438 * 10 9 8 12 12 C 1.47052 * 119.99879 * 179.97438 * 10 9 8 13 13 C 1.36217 * 123.49508 * 179.97438 * 12 10 9 14 14 Cl 1.73598 * 124.60115 * 0.02911 * 13 12 10 15 15 S 1.70439 * 110.79132 * 180.02562 * 13 12 10 16 16 C 1.75489 * 92.46904 * 0.02562 * 15 13 12 17 17 C 1.50701 * 124.68912 * 179.97438 * 16 15 13 18 18 O 1.42903 * 109.46878 * 245.02372 * 17 16 15 19 19 Si 1.86300 * 109.46948 * 5.02590 * 17 16 15 20 20 H 1.48503 * 109.46942 * 299.99736 * 19 17 16 21 21 H 1.48503 * 109.47262 * 60.00072 * 19 17 16 22 22 H 1.48500 * 109.46912 * 180.02562 * 19 17 16 23 23 C 1.32698 * 110.62754 * 0.22745 * 16 15 13 24 24 C 1.40253 * 107.84329 * 0.25504 * 8 7 6 25 25 N 1.30832 * 108.33494 * 359.56247 * 24 8 7 26 26 H 1.09001 * 109.46929 * 300.00292 * 1 2 3 27 27 H 1.09004 * 109.47238 * 59.99893 * 1 2 3 28 28 H 1.08994 * 109.47023 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47499 * 179.97438 * 3 2 1 30 30 H 1.08995 * 109.47186 * 300.00472 * 3 2 1 31 31 H 1.09009 * 109.47192 * 60.00271 * 3 2 1 32 32 H 1.08993 * 109.47413 * 300.00215 * 4 2 1 33 33 H 1.09004 * 109.46748 * 59.99913 * 4 2 1 34 34 H 1.09001 * 109.47178 * 179.97438 * 4 2 1 35 35 H 1.09000 * 109.46877 * 300.00590 * 5 2 1 36 36 H 1.09001 * 109.47281 * 180.02562 * 5 2 1 37 37 H 1.08000 * 126.22031 * 359.97320 * 7 6 5 38 38 H 0.96998 * 120.00058 * 359.97438 * 9 8 7 39 39 H 1.09001 * 109.46927 * 125.02307 * 17 16 15 40 40 H 0.96700 * 113.99509 * 179.97438 * 18 17 16 41 41 H 1.08003 * 123.45680 * 179.77070 * 23 16 15 42 42 H 1.07995 * 125.82934 * 179.69857 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5210 5 6 2.4841 -0.8782 1.5212 6 7 1.9957 -2.2594 1.5212 7 6 2.6259 -3.3302 0.9721 8 6 1.8454 -4.4197 1.1879 9 7 2.1296 -5.7368 0.7806 10 6 1.2638 -6.7307 1.0617 11 8 0.2367 -6.4896 1.6680 12 6 1.5604 -8.1065 0.6357 13 6 0.7374 -9.1637 0.8820 14 17 -0.7755 -9.0592 1.7269 15 16 1.3947 -10.6027 0.2479 16 6 2.8140 -9.7733 -0.3663 17 6 3.9430 -10.4405 -1.1088 18 8 5.1404 -10.3524 -0.3338 19 14 3.5219 -12.2317 -1.3999 20 1 3.3181 -12.9107 -0.0950 21 1 2.2776 -12.3232 -2.2052 22 1 4.6347 -12.8893 -2.1310 23 6 2.7584 -8.4783 -0.0819 24 6 0.7029 -3.9989 1.8842 25 7 0.7966 -2.7099 2.0879 26 1 -0.3633 0.5139 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 3.5740 1.7565 0.0005 30 1 2.1206 2.2703 -0.8899 31 1 2.1207 2.2703 0.8901 32 1 2.1207 -1.9058 -1.5211 33 1 2.1207 -0.3644 -2.4110 34 1 3.5740 -0.8778 -1.5212 35 1 2.1206 -0.3644 2.4111 36 1 3.5741 -0.8778 1.5214 37 1 3.5753 -3.3171 0.4575 38 1 2.9485 -5.9291 0.2976 39 1 4.0926 -9.9421 -2.0666 40 1 5.9102 -10.7626 -0.7514 41 1 3.5280 -7.7739 -0.3608 42 1 -0.1135 -4.6312 2.2003 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:33:02 Heat of formation + Delta-G solvation = 8.245363 kcal Electronic energy + Delta-G solvation = -26249.370775 eV Core-core repulsion = 22314.915138 eV Total energy + Delta-G solvation = -3934.455637 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 373.060 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.20185 -40.68564 -38.84535 -37.90470 -37.08419 -35.74700 -33.56993 -31.87696 -30.38707 -29.66734 -28.56144 -28.42006 -27.36429 -26.90523 -25.47146 -22.75647 -21.95168 -21.61415 -20.35880 -19.16158 -18.67506 -18.53038 -17.49192 -16.79868 -16.61273 -16.47843 -15.98817 -15.82675 -15.34212 -14.99896 -14.89518 -14.54993 -14.42282 -14.36444 -14.29165 -14.28001 -13.98405 -13.88582 -13.73352 -13.50689 -13.39287 -13.22500 -13.14155 -13.05811 -12.62334 -12.43175 -12.36211 -12.09793 -12.05100 -11.90218 -11.58059 -11.27507 -11.01563 -10.90703 -10.71921 -10.58311 -9.94736 -9.87858 -9.72243 -8.48334 -0.59859 -0.23333 0.40844 0.60783 0.87980 0.94117 1.08826 1.25294 1.29833 1.36304 1.53580 1.70557 1.72285 1.89152 1.90830 2.30973 2.44219 2.52180 3.06957 3.46965 3.72379 3.83099 3.86132 3.95074 4.12976 4.31184 4.38950 4.52219 4.58332 4.60402 4.63622 4.65437 4.68478 4.77608 4.79696 4.81772 4.84286 4.90683 5.25233 5.34782 5.42127 5.60336 6.00454 6.10217 6.33015 6.44905 6.88991 7.23090 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 1.019 2.981 3 C -0.450 4.450 4 C -0.449 4.449 5 C -0.168 4.168 6 N -0.344 5.344 7 C 0.014 3.986 8 C -0.001 4.001 9 N -0.635 5.635 10 C 0.579 3.421 11 O -0.508 6.508 12 C -0.156 4.156 13 C -0.110 4.110 14 Cl 0.030 6.970 15 S 0.231 5.769 16 C -0.190 4.190 17 C -0.039 4.039 18 O -0.541 6.541 19 Si 0.878 3.122 20 H -0.226 1.226 21 H -0.229 1.229 22 H -0.223 1.223 23 C -0.069 4.069 24 C 0.048 3.952 25 N -0.282 5.282 26 H 0.070 0.930 27 H 0.068 0.932 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.075 0.925 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.073 0.927 34 H 0.070 0.930 35 H 0.104 0.896 36 H 0.098 0.902 37 H 0.176 0.824 38 H 0.409 0.591 39 H 0.091 0.909 40 H 0.385 0.615 41 H 0.159 0.841 42 H 0.205 0.795 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.722 -0.752 -5.745 8.875 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.213 2.787 3 C -0.558 4.558 4 C -0.557 4.557 5 C -0.334 4.334 6 N -0.127 5.127 7 C -0.135 4.135 8 C -0.105 4.105 9 N -0.281 5.281 10 C 0.365 3.635 11 O -0.384 6.384 12 C -0.175 4.175 13 C -0.257 4.257 14 Cl 0.059 6.941 15 S 0.496 5.504 16 C -0.307 4.307 17 C -0.152 4.152 18 O -0.347 6.347 19 Si 0.697 3.303 20 H -0.149 1.149 21 H -0.151 1.151 22 H -0.146 1.146 23 C -0.098 4.098 24 C -0.138 4.138 25 N -0.105 5.105 26 H 0.090 0.910 27 H 0.087 0.913 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.094 0.906 31 H 0.091 0.909 32 H 0.089 0.911 33 H 0.092 0.908 34 H 0.089 0.911 35 H 0.123 0.877 36 H 0.117 0.883 37 H 0.193 0.807 38 H 0.244 0.756 39 H 0.109 0.891 40 H 0.234 0.766 41 H 0.176 0.824 42 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 4.259 -1.546 -4.429 6.336 hybrid contribution 1.793 0.818 -0.657 2.078 sum 6.051 -0.728 -5.086 7.939 Atomic orbital electron populations 1.26068 1.20052 1.04939 1.04379 0.79382 0.68123 0.66344 0.64843 1.26100 1.06365 1.18277 1.05067 1.26121 1.06108 1.08319 1.15188 1.26942 1.04411 0.83291 1.18765 1.47968 1.15707 1.06325 1.42723 1.21849 1.00197 0.86518 1.04888 1.17615 0.98544 0.84504 1.09884 1.42539 1.23836 1.04591 1.57090 1.17291 0.83261 0.83318 0.79601 1.90762 1.25229 1.82836 1.39524 1.20038 0.96430 0.93867 1.07150 1.25361 0.96063 0.99910 1.04413 1.98445 1.24213 1.97822 1.73631 1.83426 1.11697 1.05550 1.49683 1.23532 1.00642 0.97358 1.09172 1.23939 0.85436 1.10354 0.95453 1.86517 1.18364 1.82441 1.47419 0.86459 0.84186 0.75804 0.83862 1.14872 1.15146 1.14564 1.20972 0.95913 0.95484 0.97461 1.24488 0.98926 0.91739 0.98644 1.77459 1.01203 1.12291 1.19540 0.91045 0.91257 0.90959 0.90987 0.90595 0.90872 0.91077 0.90774 0.91130 0.87730 0.88341 0.80728 0.75557 0.89088 0.76631 0.82374 0.77832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 -0.04 8.65 101.05 0.87 0.83 16 2 Si 1.02 -2.87 12.79 -169.99 -2.17 -5.04 16 3 C -0.45 1.21 8.65 101.05 0.87 2.08 16 4 C -0.45 0.98 8.65 101.05 0.87 1.85 16 5 C -0.17 0.26 5.59 59.85 0.33 0.60 16 6 N -0.34 -0.53 3.01 -9.17 -0.03 -0.56 16 7 C 0.01 0.01 11.44 -16.67 -0.19 -0.18 16 8 C 0.00 0.00 6.90 -83.89 -0.58 -0.58 16 9 N -0.64 -0.53 5.45 -11.10 -0.06 -0.60 16 10 C 0.58 1.82 7.76 -12.69 -0.10 1.72 16 11 O -0.51 -3.00 12.06 5.21 0.06 -2.94 16 12 C -0.16 -0.28 5.98 -104.58 -0.63 -0.91 16 13 C -0.11 -0.26 6.87 30.01 0.21 -0.06 16 14 Cl 0.03 0.11 27.20 -51.86 -1.41 -1.30 16 15 S 0.23 0.10 20.19 -107.50 -2.17 -2.07 16 16 C -0.19 0.11 5.69 -36.19 -0.21 -0.10 16 17 C -0.04 0.11 2.93 36.01 0.11 0.21 16 18 O -0.54 1.26 12.86 -35.23 -0.45 0.81 16 19 Si 0.88 -2.02 26.20 -169.99 -4.45 -6.47 16 20 H -0.23 0.18 7.11 56.52 0.40 0.59 16 21 H -0.23 0.39 7.11 56.52 0.40 0.80 16 22 H -0.22 0.60 7.11 56.52 0.40 1.00 16 23 C -0.07 0.05 9.75 -39.00 -0.38 -0.33 16 24 C 0.05 0.23 10.84 -17.22 -0.19 0.04 16 25 N -0.28 -1.32 12.56 30.70 0.39 -0.93 16 26 H 0.07 0.03 7.96 -51.93 -0.41 -0.39 16 27 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 28 H 0.07 0.15 7.96 -51.93 -0.41 -0.26 16 29 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 30 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 31 H 0.07 -0.19 7.96 -51.92 -0.41 -0.60 16 32 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 33 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 34 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 35 H 0.10 -0.15 7.96 -51.93 -0.41 -0.56 16 36 H 0.10 -0.37 7.96 -51.93 -0.41 -0.79 16 37 H 0.18 -0.58 8.06 -52.49 -0.42 -1.00 16 38 H 0.41 -1.05 7.37 -40.82 -0.30 -1.35 16 39 H 0.09 -0.46 7.96 -51.93 -0.41 -0.87 16 40 H 0.39 -2.58 8.74 45.56 0.40 -2.18 16 41 H 0.16 -0.55 7.10 -52.48 -0.37 -0.92 16 42 H 0.21 1.15 5.91 -52.49 -0.31 0.84 16 LS Contribution 386.08 15.07 5.82 5.82 Total: 0.00 -8.91 386.08 -8.25 -17.16 By element: Atomic # 1 Polarization: -4.29 SS G_CDS: -4.77 Total: -9.05 kcal Atomic # 6 Polarization: 4.18 SS G_CDS: 1.00 Total: 5.19 kcal Atomic # 7 Polarization: -2.38 SS G_CDS: 0.30 Total: -2.09 kcal Atomic # 8 Polarization: -1.74 SS G_CDS: -0.39 Total: -2.13 kcal Atomic # 14 Polarization: -4.88 SS G_CDS: -6.63 Total: -11.51 kcal Atomic # 16 Polarization: 0.10 SS G_CDS: -2.17 Total: -2.07 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.41 Total: -1.30 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -8.91 -8.25 -17.16 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.401 kcal (2) G-P(sol) polarization free energy of solvation -8.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.491 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.156 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds