Wall clock time and date at job start Sun Mar 7 2021 10:33:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37870 * 126.45613 * 2 1 4 4 C 1.46669 * 126.23687 * 0.03763 * 3 2 1 5 5 O 1.21727 * 119.99340 * 359.97438 * 4 3 2 6 6 N 1.34774 * 120.00508 * 179.97438 * 4 3 2 7 7 C 1.40720 * 120.00157 * 179.97438 * 6 4 3 8 8 C 1.35765 * 126.08104 * 180.02562 * 7 6 4 9 9 N 1.35832 * 107.55876 * 180.02562 * 8 7 6 10 10 C 1.46497 * 126.05745 * 179.97438 * 9 8 7 11 11 Si 1.86293 * 109.47533 * 89.99126 * 10 9 8 12 12 C 1.86305 * 109.47175 * 60.00305 * 11 10 9 13 13 C 1.86302 * 109.47110 * 180.02562 * 11 10 9 14 14 C 1.86297 * 109.47209 * 300.00430 * 11 10 9 15 15 N 1.40075 * 107.89404 * 359.97438 * 9 8 7 16 16 C 1.30842 * 108.36993 * 359.71986 * 15 9 8 17 17 N 1.37649 * 107.53258 * 179.90128 * 3 2 1 18 18 C 1.35549 * 108.64235 * 0.37158 * 17 3 2 19 19 C 1.50707 * 125.56301 * 179.75414 * 18 17 3 20 20 O 1.42895 * 109.47145 * 120.02143 * 19 18 17 21 21 Si 1.86294 * 109.47022 * 0.02562 * 19 18 17 22 22 H 1.48497 * 109.47175 * 60.00324 * 21 19 18 23 23 H 1.48499 * 109.47157 * 180.02562 * 21 19 18 24 24 H 1.48497 * 109.47386 * 300.00085 * 21 19 18 25 25 C 1.35443 * 108.87455 * 359.76817 * 18 17 3 26 26 H 1.09002 * 109.47152 * 269.70988 * 1 2 3 27 27 H 1.09001 * 109.46980 * 149.71088 * 1 2 3 28 28 H 1.09004 * 109.47113 * 29.71069 * 1 2 3 29 29 H 0.97002 * 119.99887 * 0.02562 * 6 4 3 30 30 H 1.08000 * 126.21964 * 359.97438 * 8 7 6 31 31 H 1.09000 * 109.47090 * 210.00180 * 10 9 8 32 32 H 1.09010 * 109.46539 * 329.99062 * 10 9 8 33 33 H 1.09000 * 109.47044 * 60.00063 * 12 11 10 34 34 H 1.08998 * 109.47051 * 179.97438 * 12 11 10 35 35 H 1.09000 * 109.47005 * 300.00241 * 12 11 10 36 36 H 1.09000 * 109.47417 * 60.00295 * 13 11 10 37 37 H 1.08997 * 109.46829 * 180.02562 * 13 11 10 38 38 H 1.09000 * 109.47157 * 299.99966 * 13 11 10 39 39 H 1.08999 * 109.47431 * 60.00086 * 14 11 10 40 40 H 1.08998 * 109.47106 * 180.02562 * 14 11 10 41 41 H 1.09000 * 109.47131 * 299.99591 * 14 11 10 42 42 H 1.07997 * 125.83401 * 180.25959 * 16 15 9 43 43 H 0.97002 * 125.67653 * 180.14342 * 17 3 2 44 44 H 1.09003 * 109.46701 * 240.02579 * 19 18 17 45 45 H 0.96698 * 114.00118 * 299.99403 * 20 19 18 46 46 H 1.07995 * 126.07152 * 180.02562 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5092 0.0008 5 8 0.7024 2.7765 0.0010 6 7 2.8037 3.4999 0.0012 7 6 2.3850 4.8433 0.0014 8 6 3.1946 5.9332 0.0013 9 7 2.3994 7.0344 0.0022 10 6 2.8548 8.4268 0.0029 11 14 3.0478 9.0181 -1.7531 12 6 1.4089 8.9013 -2.6313 13 6 3.6276 10.7886 -1.7520 14 6 4.3004 7.9556 -2.6321 15 7 1.0668 6.6029 0.0022 16 6 1.0569 5.2946 -0.0047 17 7 3.6284 0.6625 0.0023 18 6 3.6217 -0.6930 -0.0047 19 6 4.8434 -1.5754 -0.0102 20 8 4.8357 -2.4067 1.1520 21 14 6.3752 -0.5153 -0.0052 22 1 6.3846 0.3353 1.2120 23 1 7.5790 -1.3848 -0.0113 24 1 6.3833 0.3487 -1.2129 25 6 2.3380 -1.1248 -0.0062 26 1 -0.3633 -0.0052 1.0277 27 1 -0.3633 -0.8874 -0.5183 28 1 -0.3633 0.8926 -0.5094 29 1 3.7500 3.2868 0.0006 30 1 4.2746 5.9258 0.0015 31 1 2.1220 9.0484 0.5173 32 1 3.8137 8.4951 0.5168 33 1 0.6760 9.5230 -2.1171 34 1 1.5217 9.2478 -3.6586 35 1 1.0700 7.8654 -2.6319 36 1 4.5866 10.8566 -1.2383 37 1 3.7401 11.1347 -2.7794 38 1 2.8950 11.4105 -1.2376 39 1 3.9615 6.9196 -2.6328 40 1 4.4136 8.3018 -3.6594 41 1 5.2593 8.0239 -2.1183 42 1 0.1767 4.6690 -0.0105 43 1 4.4190 1.2244 0.0048 44 1 4.8365 -2.1998 -0.9037 45 1 4.8413 -1.9171 1.9859 46 1 2.0137 -2.1549 -0.0109 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:33:22 Heat of formation + Delta-G solvation = 17.768553 kcal Electronic energy + Delta-G solvation = -26566.456219 eV Core-core repulsion = 22810.323696 eV Total energy + Delta-G solvation = -3756.132524 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 336.153 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.71794 -42.12003 -40.01195 -37.82976 -35.99164 -33.77436 -33.54467 -31.64125 -30.28513 -29.70854 -28.61233 -28.46817 -28.30563 -27.50384 -26.32482 -23.37535 -22.35547 -21.83379 -21.25751 -20.28252 -19.54721 -18.36036 -17.95913 -16.90133 -16.79434 -16.71905 -16.47033 -15.90112 -15.67853 -15.23905 -15.00849 -14.72540 -14.53721 -14.39573 -14.33942 -14.06480 -13.96812 -13.91700 -13.82504 -13.58368 -13.47327 -13.44065 -13.37902 -13.27575 -13.19117 -12.94143 -12.60049 -12.47385 -12.21256 -12.17715 -11.67154 -11.37673 -11.06744 -10.95913 -10.88719 -10.66744 -10.03532 -9.79420 -9.24721 -8.56745 0.23255 0.79208 0.83234 1.09108 1.12408 1.26129 1.46072 1.58099 1.60080 1.65384 1.80803 1.86318 1.91052 2.16468 2.38876 2.49788 3.23838 3.55157 3.61171 3.72377 3.85175 4.16820 4.23860 4.31075 4.38189 4.45911 4.53296 4.55753 4.58310 4.59721 4.64129 4.71440 4.75333 4.78624 4.80402 4.93764 5.05222 5.11986 5.24022 5.29958 5.36933 5.47872 5.55940 5.68305 5.90295 5.92777 6.00728 6.14709 6.36199 6.36764 6.80222 7.11659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.062 4.062 3 C -0.052 4.052 4 C 0.593 3.407 5 O -0.509 6.509 6 N -0.646 5.646 7 C -0.003 4.003 8 C 0.013 3.987 9 N -0.343 5.343 10 C -0.169 4.169 11 Si 1.019 2.981 12 C -0.446 4.446 13 C -0.450 4.450 14 C -0.450 4.450 15 N -0.280 5.280 16 C 0.049 3.951 17 N -0.543 5.543 18 C 0.015 3.985 19 C -0.051 4.051 20 O -0.529 6.529 21 Si 0.921 3.079 22 H -0.247 1.247 23 H -0.234 1.234 24 H -0.246 1.246 25 C -0.169 4.169 26 H 0.070 0.930 27 H 0.065 0.935 28 H 0.082 0.918 29 H 0.401 0.599 30 H 0.175 0.825 31 H 0.105 0.895 32 H 0.098 0.902 33 H 0.071 0.929 34 H 0.069 0.931 35 H 0.071 0.929 36 H 0.071 0.929 37 H 0.075 0.925 38 H 0.073 0.927 39 H 0.069 0.931 40 H 0.074 0.926 41 H 0.069 0.931 42 H 0.206 0.794 43 H 0.408 0.592 44 H 0.132 0.868 45 H 0.379 0.621 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.505 1.278 -0.473 6.647 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.071 4.071 3 C -0.164 4.164 4 C 0.382 3.618 5 O -0.384 6.384 6 N -0.290 5.290 7 C -0.107 4.107 8 C -0.135 4.135 9 N -0.126 5.126 10 C -0.335 4.335 11 Si 1.213 2.787 12 C -0.554 4.554 13 C -0.558 4.558 14 C -0.558 4.558 15 N -0.103 5.103 16 C -0.137 4.137 17 N -0.144 5.144 18 C -0.101 4.101 19 C -0.163 4.163 20 O -0.333 6.333 21 Si 0.742 3.258 22 H -0.171 1.171 23 H -0.157 1.157 24 H -0.169 1.169 25 C -0.193 4.193 26 H 0.089 0.911 27 H 0.084 0.916 28 H 0.101 0.899 29 H 0.235 0.765 30 H 0.192 0.808 31 H 0.124 0.876 32 H 0.117 0.883 33 H 0.090 0.910 34 H 0.088 0.912 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.094 0.906 38 H 0.092 0.908 39 H 0.088 0.912 40 H 0.093 0.907 41 H 0.088 0.912 42 H 0.223 0.777 43 H 0.247 0.753 44 H 0.149 0.851 45 H 0.226 0.774 46 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 5.836 2.785 -0.840 6.520 hybrid contribution 1.250 -0.453 0.539 1.435 sum 7.086 2.332 -0.301 7.466 Atomic orbital electron populations 1.20414 0.88748 1.03344 1.02611 1.20058 0.96143 0.90388 1.00515 1.19982 0.83359 0.92975 1.20036 1.16949 0.85571 0.82649 0.76660 1.90730 1.15867 1.82434 1.49372 1.42622 1.09387 1.03211 1.73815 1.17606 0.93527 0.83401 1.16209 1.21843 0.97367 0.85874 1.08448 1.47981 1.03774 1.04920 1.55929 1.26964 1.03562 0.80945 1.22002 0.79384 0.68094 0.67057 0.64153 1.26065 1.16537 1.05124 1.07699 1.26095 1.06176 1.18414 1.05114 1.26130 1.11351 1.09868 1.08437 1.77479 0.96575 1.12517 1.23710 1.24493 0.97554 0.91277 1.00352 1.42015 1.07087 1.06571 1.58700 1.20933 0.98057 0.82392 1.08693 1.24451 1.00406 0.98390 0.93010 1.86575 1.96765 1.34809 1.15194 0.86094 0.78597 0.79509 0.81635 1.17075 1.15657 1.16918 1.20650 0.90356 0.99196 1.09129 0.91130 0.91582 0.89905 0.76518 0.80826 0.87625 0.88339 0.90992 0.91210 0.90967 0.90991 0.90556 0.90829 0.91154 0.90711 0.91169 0.77732 0.75337 0.85058 0.77406 0.83256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.17 9.84 36.01 0.35 0.19 16 2 C -0.06 -0.13 6.21 -104.15 -0.65 -0.78 16 3 C -0.05 -0.08 7.06 -81.99 -0.58 -0.65 16 4 C 0.59 1.50 7.76 -12.86 -0.10 1.40 16 5 O -0.51 -2.61 11.94 5.16 0.06 -2.55 16 6 N -0.65 -0.19 5.47 -11.21 -0.06 -0.26 16 7 C 0.00 -0.01 6.90 -83.90 -0.58 -0.59 16 8 C 0.01 0.00 11.44 -16.67 -0.19 -0.19 16 9 N -0.34 -0.38 3.01 -9.16 -0.03 -0.41 16 10 C -0.17 0.33 5.59 59.85 0.33 0.66 16 11 Si 1.02 -3.15 12.79 -169.99 -2.17 -5.33 16 12 C -0.45 0.10 8.65 101.05 0.87 0.98 16 13 C -0.45 1.32 8.65 101.05 0.87 2.20 16 14 C -0.45 1.07 8.65 101.05 0.87 1.94 16 15 N -0.28 -1.16 12.57 30.71 0.39 -0.78 16 16 C 0.05 0.21 10.84 -17.21 -0.19 0.02 16 17 N -0.54 0.59 5.47 -5.70 -0.03 0.56 16 18 C 0.02 -0.01 6.12 -81.94 -0.50 -0.51 16 19 C -0.05 0.12 2.98 36.01 0.11 0.23 16 20 O -0.53 0.71 12.87 -35.23 -0.45 0.26 16 21 Si 0.92 -2.92 26.24 -169.99 -4.46 -7.38 16 22 H -0.25 0.81 7.11 56.52 0.40 1.21 16 23 H -0.23 0.35 7.11 56.52 0.40 0.75 16 24 H -0.25 0.73 7.11 56.52 0.40 1.13 16 25 C -0.17 -0.14 10.64 -39.98 -0.43 -0.57 16 26 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 27 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.08 0.26 6.47 -51.93 -0.34 -0.08 16 29 H 0.40 -1.24 7.95 -40.82 -0.32 -1.57 16 30 H 0.17 -0.65 8.06 -52.49 -0.42 -1.07 16 31 H 0.11 -0.19 7.96 -51.93 -0.41 -0.61 16 32 H 0.10 -0.41 7.96 -51.92 -0.41 -0.82 16 33 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 34 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 35 H 0.07 0.13 7.96 -51.93 -0.41 -0.29 16 36 H 0.07 -0.25 7.96 -51.93 -0.41 -0.66 16 37 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 38 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 39 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 40 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 41 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 42 H 0.21 0.99 5.91 -52.49 -0.31 0.68 16 43 H 0.41 -1.50 5.98 -40.82 -0.24 -1.75 16 44 H 0.13 -0.42 7.96 -51.93 -0.41 -0.83 16 45 H 0.38 -1.65 8.70 45.56 0.40 -1.26 16 46 H 0.15 0.01 8.06 -52.49 -0.42 -0.42 16 LS Contribution 385.97 15.07 5.82 5.82 Total: 0.00 -8.82 385.97 -7.00 -15.82 By element: Atomic # 1 Polarization: -3.82 SS G_CDS: -6.27 Total: -10.09 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: 0.21 Total: 4.33 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: 0.27 Total: -0.88 kcal Atomic # 8 Polarization: -1.90 SS G_CDS: -0.39 Total: -2.29 kcal Atomic # 14 Polarization: -6.07 SS G_CDS: -6.64 Total: -12.71 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -8.82 -7.00 -15.82 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.590 kcal (2) G-P(sol) polarization free energy of solvation -8.821 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.821 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds