Wall clock time and date at job start Sun Mar 7 2021 10:33:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86299 * 109.47120 * 2 1 4 4 C 1.86303 * 109.47027 * 240.00279 * 2 1 3 5 5 C 1.86300 * 109.47403 * 120.00156 * 2 1 3 6 6 N 1.46506 * 109.47174 * 60.00057 * 5 2 1 7 7 C 1.35808 * 126.04999 * 270.29740 * 6 5 2 8 8 C 1.35763 * 107.56302 * 180.13290 * 7 6 5 9 9 N 1.40763 * 126.08118 * 179.89609 * 8 7 6 10 10 C 1.34769 * 119.99572 * 179.71881 * 9 8 7 11 11 O 1.21303 * 120.00570 * 359.97438 * 10 9 8 12 12 C 1.50706 * 119.99849 * 180.02562 * 10 9 8 13 13 C 1.50698 * 109.47178 * 179.97438 * 12 10 9 14 14 C 1.34845 * 125.88977 * 275.02367 * 13 12 10 15 15 C 1.40899 * 107.41955 * 179.97438 * 14 13 12 16 16 C 1.34849 * 107.40982 * 359.73389 * 15 14 13 17 17 C 1.50708 * 125.88737 * 180.25597 * 16 15 14 18 18 O 1.42902 * 109.47043 * 120.20092 * 17 16 15 19 19 Si 1.86292 * 109.47087 * 0.20007 * 17 16 15 20 20 H 1.48502 * 109.47246 * 59.99990 * 19 17 16 21 21 H 1.48503 * 109.47216 * 179.97438 * 19 17 16 22 22 H 1.48495 * 109.47267 * 299.99973 * 19 17 16 23 23 N 1.36341 * 108.22519 * 0.42861 * 16 15 14 24 24 C 1.40252 * 107.83364 * 359.63504 * 8 7 6 25 25 N 1.30827 * 108.34045 * 0.22571 * 24 8 7 26 26 H 1.09001 * 109.47042 * 299.99526 * 1 2 3 27 27 H 1.08995 * 109.47136 * 60.00188 * 1 2 3 28 28 H 1.09001 * 109.47076 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.46820 * 180.02562 * 3 2 1 30 30 H 1.09000 * 109.47300 * 300.00216 * 3 2 1 31 31 H 1.08997 * 109.47178 * 60.00580 * 3 2 1 32 32 H 1.09001 * 109.46882 * 299.99739 * 4 2 1 33 33 H 1.08995 * 109.47544 * 59.99783 * 4 2 1 34 34 H 1.08994 * 109.47571 * 180.02562 * 4 2 1 35 35 H 1.08994 * 109.46952 * 300.00345 * 5 2 1 36 36 H 1.09003 * 109.47090 * 179.97438 * 5 2 1 37 37 H 1.08000 * 126.22656 * 359.97438 * 7 6 5 38 38 H 0.96999 * 120.00121 * 359.71195 * 9 8 7 39 39 H 1.08999 * 109.46816 * 59.99449 * 12 10 9 40 40 H 1.09001 * 109.46873 * 299.99830 * 12 10 9 41 41 H 1.07997 * 126.29434 * 359.97438 * 14 13 12 42 42 H 1.07996 * 126.29224 * 179.97438 * 15 14 13 43 43 H 1.08997 * 109.46831 * 240.19961 * 17 16 15 44 44 H 0.96703 * 114.00238 * 300.00395 * 18 17 16 45 45 H 0.97001 * 125.64231 * 179.83591 * 23 16 15 46 46 H 1.08004 * 125.83029 * 180.22276 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4841 -0.8783 1.5211 6 7 1.9958 -2.2595 1.5211 7 6 0.8302 -2.6952 2.0652 8 6 0.7550 -4.0343 1.8544 9 7 -0.2941 -4.8799 2.2615 10 6 -0.2450 -6.1972 1.9813 11 8 0.7029 -6.6541 1.3778 12 6 -1.3685 -7.1025 2.4165 13 6 -1.0721 -8.5150 1.9830 14 6 -1.3463 -9.0448 0.7737 15 6 -0.9073 -10.3835 0.7902 16 6 -0.3762 -10.6190 2.0072 17 6 0.2244 -11.9206 2.4722 18 8 1.5911 -11.7122 2.8339 19 14 0.1302 -13.1742 1.0973 20 1 0.8834 -12.6743 -0.0808 21 1 0.7227 -14.4566 1.5553 22 1 -1.2900 -13.3908 0.7214 23 7 -0.4799 -9.4776 2.7457 24 6 1.9057 -4.4241 1.1537 25 7 2.6458 -3.3637 0.9552 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.5740 1.7564 -0.0005 30 1 2.1206 2.2703 -0.8900 31 1 2.1208 2.2702 0.8900 32 1 2.1207 -1.9058 -1.5212 33 1 2.1207 -0.3644 -2.4112 34 1 3.5739 -0.8786 -1.5211 35 1 2.1207 -0.3645 2.4110 36 1 3.5741 -0.8786 1.5208 37 1 0.0975 -2.0875 2.5753 38 1 -1.0522 -4.5145 2.7438 39 1 -2.3006 -6.7705 1.9593 40 1 -1.4635 -7.0675 3.5018 41 1 -1.8160 -8.5364 -0.0553 42 1 -0.9791 -11.0899 -0.0235 43 1 -0.3284 -12.2875 3.3369 44 1 2.1438 -11.3849 2.1111 45 1 -0.1783 -9.3673 3.6611 46 1 2.1408 -5.4282 0.8329 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:33:33 Heat of formation + Delta-G solvation = 16.833643 kcal Electronic energy + Delta-G solvation = -26132.925775 eV Core-core repulsion = 22376.752711 eV Total energy + Delta-G solvation = -3756.173064 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 336.153 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.37684 -42.07784 -40.23428 -37.64115 -35.76810 -33.78781 -33.02131 -31.83402 -30.51348 -29.71778 -29.21282 -28.57144 -28.43829 -26.91097 -25.13938 -22.97892 -22.14336 -21.29111 -21.22664 -20.76384 -18.95673 -18.35801 -17.89299 -17.09772 -16.66842 -16.51740 -16.26381 -16.09761 -15.45171 -15.09156 -15.02416 -14.75809 -14.36992 -14.31283 -14.24353 -14.16099 -14.07344 -13.94320 -13.85295 -13.77157 -13.58560 -13.50829 -13.41482 -13.25029 -13.16636 -12.84833 -12.18320 -12.10582 -11.96895 -11.70916 -11.62361 -11.31542 -11.04054 -10.93340 -10.79791 -10.56817 -9.98937 -9.68388 -8.87690 -8.54331 0.77320 1.08894 1.22541 1.32809 1.43215 1.57370 1.57668 1.61540 1.68458 1.85470 1.96934 2.02767 2.22683 2.36413 2.41678 2.53793 3.50491 3.59699 3.71668 3.83264 3.88061 3.96442 4.00719 4.31226 4.35590 4.48748 4.50744 4.56034 4.58221 4.60688 4.61035 4.62790 4.71980 4.77324 4.77564 4.81028 4.84897 5.21410 5.32564 5.34502 5.37445 5.39693 5.57907 5.95783 6.06673 6.07641 6.22229 6.41479 6.55875 6.69888 6.84886 7.21906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.020 2.980 3 C -0.450 4.450 4 C -0.446 4.446 5 C -0.169 4.169 6 N -0.344 5.344 7 C 0.012 3.988 8 C -0.004 4.004 9 N -0.645 5.645 10 C 0.511 3.489 11 O -0.511 6.511 12 C -0.067 4.067 13 C 0.034 3.966 14 C -0.170 4.170 15 C -0.195 4.195 16 C -0.008 4.008 17 C -0.062 4.062 18 O -0.545 6.545 19 Si 0.977 3.023 20 H -0.249 1.249 21 H -0.256 1.256 22 H -0.249 1.249 23 N -0.533 5.533 24 C 0.047 3.953 25 N -0.282 5.282 26 H 0.069 0.931 27 H 0.073 0.927 28 H 0.070 0.930 29 H 0.072 0.928 30 H 0.075 0.925 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.069 0.931 34 H 0.070 0.930 35 H 0.098 0.902 36 H 0.104 0.896 37 H 0.175 0.825 38 H 0.410 0.590 39 H 0.119 0.881 40 H 0.102 0.898 41 H 0.136 0.864 42 H 0.136 0.864 43 H 0.114 0.886 44 H 0.381 0.619 45 H 0.414 0.586 46 H 0.204 0.796 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.596 4.480 2.593 6.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.214 2.786 3 C -0.558 4.558 4 C -0.554 4.554 5 C -0.335 4.335 6 N -0.127 5.127 7 C -0.136 4.136 8 C -0.108 4.108 9 N -0.291 5.291 10 C 0.298 3.702 11 O -0.385 6.385 12 C -0.108 4.108 13 C -0.079 4.079 14 C -0.194 4.194 15 C -0.220 4.220 16 C -0.122 4.122 17 C -0.172 4.172 18 O -0.350 6.350 19 Si 0.798 3.202 20 H -0.172 1.172 21 H -0.180 1.180 22 H -0.172 1.172 23 N -0.128 5.128 24 C -0.140 4.140 25 N -0.105 5.105 26 H 0.089 0.911 27 H 0.093 0.907 28 H 0.089 0.911 29 H 0.091 0.909 30 H 0.094 0.906 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.116 0.884 36 H 0.123 0.877 37 H 0.192 0.808 38 H 0.244 0.756 39 H 0.137 0.863 40 H 0.120 0.880 41 H 0.154 0.846 42 H 0.154 0.846 43 H 0.132 0.868 44 H 0.228 0.772 45 H 0.250 0.750 46 H 0.220 0.780 Dipole moment (debyes) X Y Z Total from point charges -2.989 3.858 1.782 5.195 hybrid contribution -0.885 0.648 1.091 1.547 sum -3.874 4.505 2.873 6.600 Atomic orbital electron populations 1.26124 1.20212 1.04671 1.04731 0.79371 0.67535 0.66109 0.65600 1.26099 1.06622 1.18152 1.04940 1.26070 1.06478 1.08302 1.14598 1.26950 1.06678 0.82127 1.17696 1.47969 1.14751 1.06941 1.43059 1.21866 0.92900 0.94027 1.04803 1.17671 0.93805 0.89534 1.09827 1.42792 1.21774 1.07053 1.57485 1.20643 0.88295 0.81579 0.79692 1.90652 1.34147 1.74622 1.39082 1.20071 0.98263 0.89216 1.03235 1.19410 1.05374 0.90028 0.93124 1.20574 1.07449 0.94949 0.96465 1.20660 1.07102 0.97654 0.96567 1.20797 1.08410 0.89757 0.93253 1.24754 0.84144 0.97901 1.10392 1.86475 1.18266 1.88883 1.41425 0.85285 0.81747 0.76998 0.76197 1.17237 1.17968 1.17247 1.41761 1.47342 1.09581 1.14075 1.24468 0.91548 0.99237 0.98709 1.77461 1.20645 0.92284 1.20141 0.91143 0.90741 0.91109 0.90868 0.90576 0.90987 0.90997 0.91226 0.91045 0.88350 0.87730 0.80763 0.75554 0.86259 0.87989 0.84577 0.84614 0.86790 0.77169 0.74963 0.77988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.07 8.65 101.05 0.87 1.95 16 2 Si 1.02 -3.10 12.78 -169.99 -2.17 -5.28 16 3 C -0.45 1.29 8.65 101.05 0.87 2.17 16 4 C -0.45 0.05 8.65 101.05 0.87 0.92 16 5 C -0.17 0.31 5.59 59.85 0.33 0.64 16 6 N -0.34 -0.41 3.02 -9.17 -0.03 -0.44 16 7 C 0.01 0.00 11.43 -16.68 -0.19 -0.19 16 8 C 0.00 -0.01 6.90 -83.88 -0.58 -0.59 16 9 N -0.65 0.64 5.47 -10.03 -0.05 0.58 16 10 C 0.51 0.37 7.79 -10.99 -0.09 0.28 16 11 O -0.51 -2.49 13.19 5.54 0.07 -2.42 16 12 C -0.07 0.15 6.24 -29.03 -0.18 -0.03 16 13 C 0.03 0.04 5.66 -81.79 -0.46 -0.43 16 14 C -0.17 -0.40 10.76 -39.78 -0.43 -0.82 16 15 C -0.19 -0.47 9.37 -39.78 -0.37 -0.84 16 16 C -0.01 -0.01 6.50 -81.79 -0.53 -0.55 16 17 C -0.06 -0.02 3.08 36.01 0.11 0.10 16 18 O -0.55 -0.64 12.88 -35.23 -0.45 -1.09 16 19 Si 0.98 0.01 25.87 -169.99 -4.40 -4.38 16 20 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 21 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 22 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 23 N -0.53 -0.51 6.08 -5.44 -0.03 -0.55 16 24 C 0.05 0.20 10.84 -17.22 -0.19 0.02 16 25 N -0.28 -1.24 12.56 30.70 0.39 -0.85 16 26 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 27 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 28 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 29 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 30 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 31 H 0.07 -0.24 7.96 -51.93 -0.41 -0.66 16 32 H 0.07 0.14 7.96 -51.93 -0.41 -0.28 16 33 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16 34 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 35 H 0.10 -0.40 7.96 -51.93 -0.41 -0.81 16 36 H 0.10 -0.17 7.96 -51.93 -0.41 -0.58 16 37 H 0.18 -0.67 8.06 -52.49 -0.42 -1.09 16 38 H 0.41 -1.94 8.83 -40.82 -0.36 -2.30 16 39 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 40 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 41 H 0.14 0.17 8.06 -52.49 -0.42 -0.25 16 42 H 0.14 0.17 6.22 -52.49 -0.33 -0.15 16 43 H 0.11 -0.10 7.96 -51.93 -0.41 -0.52 16 44 H 0.38 -0.46 8.70 45.56 0.40 -0.06 16 45 H 0.41 -0.32 8.96 -40.82 -0.37 -0.69 16 46 H 0.20 1.09 5.92 -52.48 -0.31 0.78 16 LS Contribution 389.89 15.07 5.88 5.88 Total: 0.00 -10.42 389.89 -7.17 -17.59 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -6.42 Total: -11.65 kcal Atomic # 6 Polarization: 2.57 SS G_CDS: 0.05 Total: 2.62 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: 0.27 Total: -1.26 kcal Atomic # 8 Polarization: -3.13 SS G_CDS: -0.38 Total: -3.51 kcal Atomic # 14 Polarization: -3.09 SS G_CDS: -6.57 Total: -9.66 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -10.42 -7.17 -17.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.423 kcal (2) G-P(sol) polarization free energy of solvation -10.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.171 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.589 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds