Wall clock time and date at job start Sun Mar 7 2021 10:33:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86304 * 1 3 3 C 1.86298 * 109.47241 * 2 1 4 4 C 1.86293 * 109.47129 * 239.99809 * 2 1 3 5 5 C 1.86302 * 109.46711 * 120.00042 * 2 1 3 6 6 N 1.46496 * 109.47292 * 60.00210 * 5 2 1 7 7 C 1.35814 * 126.05647 * 89.99934 * 6 5 2 8 8 C 1.35746 * 107.56158 * 180.02562 * 7 6 5 9 9 N 1.40771 * 126.07907 * 179.97438 * 8 7 6 10 10 C 1.34774 * 119.99937 * 179.97438 * 9 8 7 11 11 O 1.21302 * 120.00470 * 359.97438 * 10 9 8 12 12 C 1.50705 * 119.99676 * 180.02562 * 10 9 8 13 13 C 1.53546 * 109.82427 * 80.00077 * 12 10 9 14 14 C 1.53032 * 108.56341 * 180.48764 * 13 12 10 15 15 C 1.50208 * 110.18023 * 310.51166 * 14 13 12 16 16 C 1.50693 * 118.54770 * 199.94294 * 15 14 13 17 17 O 1.42898 * 109.47235 * 70.00389 * 16 15 14 18 18 Si 1.86305 * 109.46954 * 190.00173 * 16 15 14 19 19 H 1.48496 * 109.47097 * 60.00097 * 18 16 15 20 20 H 1.48505 * 109.47127 * 180.02562 * 18 16 15 21 21 H 1.48498 * 109.47209 * 299.99837 * 18 16 15 22 22 C 1.30767 * 123.15991 * 19.96997 * 15 14 13 23 23 N 1.38931 * 121.74983 * 359.66104 * 22 15 14 24 24 C 1.40253 * 107.84399 * 0.25937 * 8 7 6 25 25 N 1.30825 * 108.33267 * 359.55569 * 24 8 7 26 26 H 1.08998 * 109.47349 * 300.00187 * 1 2 3 27 27 H 1.08998 * 109.46946 * 60.00078 * 1 2 3 28 28 H 1.08997 * 109.47307 * 179.97438 * 1 2 3 29 29 H 1.08994 * 109.47281 * 179.97438 * 3 2 1 30 30 H 1.09007 * 109.47062 * 300.00127 * 3 2 1 31 31 H 1.08998 * 109.47102 * 59.99661 * 3 2 1 32 32 H 1.09008 * 109.47470 * 299.99954 * 4 2 1 33 33 H 1.09004 * 109.47489 * 60.00476 * 4 2 1 34 34 H 1.09007 * 109.47237 * 180.02562 * 4 2 1 35 35 H 1.09003 * 109.46921 * 299.99504 * 5 2 1 36 36 H 1.08999 * 109.46779 * 180.02562 * 5 2 1 37 37 H 1.08000 * 126.21490 * 359.97438 * 7 6 5 38 38 H 0.97001 * 119.99517 * 0.02562 * 9 8 7 39 39 H 1.08994 * 109.86546 * 319.10413 * 12 10 9 40 40 H 1.09001 * 109.61905 * 60.76131 * 13 12 10 41 41 H 1.09003 * 109.61797 * 300.21244 * 13 12 10 42 42 H 1.09002 * 109.32995 * 70.68866 * 14 13 12 43 43 H 1.08996 * 109.33232 * 190.34132 * 14 13 12 44 44 H 1.08996 * 109.47512 * 310.00284 * 16 15 14 45 45 H 0.96699 * 114.00039 * 59.99281 * 17 16 15 46 46 H 1.07996 * 119.17862 * 179.63029 * 22 15 14 47 47 H 0.97003 * 120.55768 * 193.25190 * 23 22 15 48 48 H 1.08003 * 125.83325 * 179.73362 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5210 5 6 2.4839 -0.8783 1.5212 6 7 1.9956 -2.2594 1.5212 7 6 2.6257 -3.3301 0.9722 8 6 1.8447 -4.4194 1.1870 9 7 2.1283 -5.7363 0.7784 10 6 1.2621 -6.7301 1.0586 11 8 0.2383 -6.4899 1.6632 12 6 1.5660 -8.1400 0.6216 13 6 2.5570 -8.7863 1.6004 14 6 2.8543 -10.2098 1.1237 15 6 1.5725 -10.9386 0.8369 16 6 1.5931 -12.4449 0.8010 17 8 1.7923 -12.9503 2.1227 18 14 -0.0294 -13.0724 0.1342 19 1 -0.2364 -12.5472 -1.2393 20 1 -0.0094 -14.5569 0.0993 21 1 -1.1359 -12.6133 1.0117 22 6 0.4370 -10.3288 0.6160 23 7 0.3348 -8.9434 0.6382 24 6 0.7019 -3.9985 1.8826 25 7 0.7959 -2.7097 2.0869 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 3.5740 1.7564 0.0005 30 1 2.1207 2.2703 -0.8900 31 1 2.1207 2.2703 0.8899 32 1 2.1207 -1.9060 -1.5211 33 1 2.1208 -0.3644 -2.4111 34 1 3.5741 -0.8787 -1.5208 35 1 2.1206 -0.3643 2.4111 36 1 3.5739 -0.8779 1.5214 37 1 3.5751 -3.3169 0.4576 38 1 2.9475 -5.9286 0.2958 39 1 1.9896 -8.1334 -0.3826 40 1 2.1182 -8.8183 2.5976 41 1 3.4802 -8.2072 1.6222 42 1 3.4564 -10.1679 0.2160 43 1 3.4062 -10.7419 1.8984 44 1 2.4053 -12.7819 0.1569 45 1 1.1054 -12.6892 2.7513 46 1 -0.4451 -10.9169 0.4102 47 1 -0.5344 -8.5134 0.6637 48 1 -0.1148 -4.6308 2.1983 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:33:45 Heat of formation + Delta-G solvation = -4.555961 kcal Electronic energy + Delta-G solvation = -27001.421156 eV Core-core repulsion = 23217.009091 eV Total energy + Delta-G solvation = -3784.412066 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 338.169 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.35242 -41.15016 -39.49448 -37.34785 -35.94275 -33.80593 -33.21499 -32.98666 -30.45799 -29.71996 -28.61477 -28.47857 -27.85621 -26.64675 -25.42890 -23.85212 -22.82613 -22.13026 -21.09091 -19.34973 -19.22064 -18.37802 -17.92991 -17.08849 -16.73682 -16.56763 -16.28900 -15.90882 -15.73153 -15.32950 -15.29004 -14.98368 -14.77363 -14.40467 -14.34323 -14.32410 -14.13227 -13.99720 -13.93587 -13.82457 -13.58536 -13.44084 -13.28331 -13.19720 -13.16579 -12.89309 -12.27452 -12.21248 -12.08863 -11.91372 -11.68735 -11.60244 -11.39271 -11.25026 -11.06924 -10.96409 -10.80871 -10.13560 -10.04914 -8.63408 -8.48535 0.69518 1.19297 1.26972 1.29905 1.39292 1.47372 1.50681 1.55337 1.64923 1.75867 1.98163 2.02353 2.13236 2.38407 2.59142 3.41589 3.64846 3.67112 3.70674 3.78927 3.85079 3.96466 4.22974 4.27167 4.34654 4.45563 4.53687 4.55336 4.55842 4.58420 4.59723 4.61697 4.67728 4.71414 4.74072 4.77217 4.77520 5.02761 5.09007 5.17552 5.27654 5.30199 5.37194 5.54376 5.56158 5.87380 5.99406 6.18522 6.34492 6.73234 6.76475 6.82375 7.04756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.020 2.980 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.169 4.169 6 N -0.343 5.343 7 C 0.017 3.983 8 C -0.007 4.007 9 N -0.637 5.637 10 C 0.513 3.487 11 O -0.520 6.520 12 C 0.141 3.859 13 C -0.127 4.127 14 C -0.053 4.053 15 C -0.278 4.278 16 C -0.057 4.057 17 O -0.545 6.545 18 Si 0.937 3.063 19 H -0.253 1.253 20 H -0.257 1.257 21 H -0.255 1.255 22 C 0.132 3.868 23 N -0.732 5.732 24 C 0.047 3.953 25 N -0.281 5.281 26 H 0.071 0.929 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.071 0.929 30 H 0.075 0.925 31 H 0.072 0.928 32 H 0.069 0.931 33 H 0.074 0.926 34 H 0.070 0.930 35 H 0.105 0.895 36 H 0.099 0.901 37 H 0.177 0.823 38 H 0.412 0.588 39 H 0.093 0.907 40 H 0.078 0.922 41 H 0.079 0.921 42 H 0.067 0.933 43 H 0.081 0.919 44 H 0.108 0.892 45 H 0.373 0.627 46 H 0.128 0.872 47 H 0.409 0.591 48 H 0.204 0.796 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.406 2.569 -3.601 6.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.215 2.785 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.335 4.335 6 N -0.126 5.126 7 C -0.132 4.132 8 C -0.112 4.112 9 N -0.282 5.282 10 C 0.299 3.701 11 O -0.394 6.394 12 C 0.032 3.968 13 C -0.166 4.166 14 C -0.090 4.090 15 C -0.288 4.288 16 C -0.169 4.169 17 O -0.349 6.349 18 Si 0.762 3.238 19 H -0.177 1.177 20 H -0.181 1.181 21 H -0.180 1.180 22 C 0.011 3.989 23 N -0.366 5.366 24 C -0.139 4.139 25 N -0.104 5.104 26 H 0.090 0.910 27 H 0.088 0.912 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.094 0.906 31 H 0.091 0.909 32 H 0.089 0.911 33 H 0.093 0.907 34 H 0.089 0.911 35 H 0.123 0.877 36 H 0.117 0.883 37 H 0.194 0.806 38 H 0.247 0.753 39 H 0.111 0.889 40 H 0.096 0.904 41 H 0.097 0.903 42 H 0.085 0.915 43 H 0.099 0.901 44 H 0.126 0.874 45 H 0.220 0.780 46 H 0.145 0.855 47 H 0.246 0.754 48 H 0.220 0.780 Dipole moment (debyes) X Y Z Total from point charges 3.036 3.331 -3.236 5.548 hybrid contribution 0.519 -0.249 -0.156 0.596 sum 3.555 3.082 -3.392 5.800 Atomic orbital electron populations 1.26073 1.20080 1.04885 1.04428 0.79360 0.68065 0.66385 0.64728 1.26098 1.06391 1.18231 1.05105 1.26130 1.06145 1.08260 1.15236 1.26971 1.04478 0.83192 1.18884 1.47991 1.15608 1.06408 1.42547 1.21884 1.00174 0.86507 1.04594 1.17644 0.98602 0.84668 1.10243 1.42672 1.23984 1.04674 1.56911 1.20630 0.83382 0.86529 0.79518 1.90622 1.25980 1.83209 1.39629 1.20926 0.88065 0.87326 1.00531 1.21894 0.98216 0.97370 0.99105 1.19952 0.94922 0.92790 1.01326 1.20852 0.96048 0.95757 1.16136 1.24623 1.11285 0.92287 0.88674 1.86486 1.53119 1.75761 1.19578 0.85904 0.76716 0.80762 0.80424 1.17662 1.18088 1.17984 1.20344 0.97644 0.83970 0.96912 1.44235 1.06981 1.02885 1.82459 1.24446 0.98901 0.91808 0.98760 1.77470 1.01182 1.12264 1.19498 0.91022 0.91218 0.91035 0.90961 0.90560 0.90854 0.91150 0.90725 0.91100 0.87664 0.88260 0.80634 0.75316 0.88935 0.90376 0.90263 0.91472 0.90051 0.87410 0.78005 0.85548 0.75370 0.78005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.20 8.65 101.05 0.87 1.07 16 2 Si 1.02 -3.44 12.79 -169.99 -2.17 -5.61 16 3 C -0.45 1.41 8.65 101.05 0.87 2.28 16 4 C -0.45 1.20 8.65 101.05 0.87 2.08 16 5 C -0.17 0.37 5.59 59.84 0.33 0.71 16 6 N -0.34 -0.25 3.01 -9.17 -0.03 -0.28 16 7 C 0.02 -0.01 11.44 -16.68 -0.19 -0.20 16 8 C -0.01 -0.01 6.90 -83.88 -0.58 -0.59 16 9 N -0.64 0.76 5.47 -10.04 -0.05 0.70 16 10 C 0.51 0.26 7.07 -10.98 -0.08 0.18 16 11 O -0.52 -2.00 13.22 5.54 0.07 -1.93 16 12 C 0.14 -0.17 3.36 -68.51 -0.23 -0.40 16 13 C -0.13 0.18 5.47 -26.43 -0.14 0.04 16 14 C -0.05 0.05 5.86 -28.10 -0.16 -0.11 16 15 C -0.28 0.05 5.36 -101.24 -0.54 -0.49 16 16 C -0.06 0.02 2.81 36.00 0.10 0.12 16 17 O -0.54 -0.45 12.88 -35.23 -0.45 -0.90 16 18 Si 0.94 -0.28 25.19 -169.99 -4.28 -4.57 16 19 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 20 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 21 H -0.26 0.03 6.87 56.52 0.39 0.42 16 22 C 0.13 -0.01 9.60 -15.98 -0.15 -0.16 16 23 N -0.73 -0.01 5.47 -55.42 -0.30 -0.31 16 24 C 0.05 0.17 10.84 -17.22 -0.19 -0.01 16 25 N -0.28 -1.08 12.56 30.70 0.39 -0.70 16 26 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 27 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 28 H 0.07 0.11 7.96 -51.93 -0.41 -0.31 16 29 H 0.07 -0.26 7.96 -51.93 -0.41 -0.67 16 30 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 31 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 32 H 0.07 -0.12 7.96 -51.92 -0.41 -0.53 16 33 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 34 H 0.07 -0.25 7.96 -51.92 -0.41 -0.66 16 35 H 0.10 -0.21 7.96 -51.93 -0.41 -0.63 16 36 H 0.10 -0.44 7.96 -51.93 -0.41 -0.85 16 37 H 0.18 -0.75 8.06 -52.49 -0.42 -1.17 16 38 H 0.41 -1.91 8.83 -40.82 -0.36 -2.27 16 39 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 40 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 41 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 42 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 43 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.11 -0.09 7.96 -51.93 -0.41 -0.50 16 45 H 0.37 -0.77 8.70 45.56 0.40 -0.38 16 46 H 0.13 -0.12 4.29 -52.49 -0.23 -0.34 16 47 H 0.41 0.10 8.08 -40.82 -0.33 -0.23 16 48 H 0.20 0.91 5.92 -52.48 -0.31 0.60 16 LS Contribution 392.08 15.07 5.91 5.91 Total: 0.00 -8.57 392.08 -7.28 -15.84 By element: Atomic # 1 Polarization: -5.53 SS G_CDS: -7.14 Total: -12.67 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: 0.79 Total: 4.51 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: 0.00 Total: -0.59 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -0.38 Total: -2.83 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: -6.46 Total: -10.18 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -8.57 -7.28 -15.84 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.288 kcal (2) G-P(sol) polarization free energy of solvation -8.569 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.276 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.844 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds