Wall clock time and date at job start Sun Mar 7 2021 10:34:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86299 * 109.47593 * 2 1 4 4 C 1.86308 * 109.47343 * 239.99826 * 2 1 3 5 5 C 1.86300 * 109.46849 * 120.00043 * 2 1 3 6 6 N 1.46496 * 109.47208 * 60.00198 * 5 2 1 7 7 C 1.35808 * 126.05774 * 90.00246 * 6 5 2 8 8 C 1.35751 * 107.56625 * 179.97438 * 7 6 5 9 9 N 1.40761 * 126.08160 * 179.97438 * 8 7 6 10 10 C 1.34782 * 120.00183 * 179.97438 * 9 8 7 11 11 O 1.21305 * 119.99713 * 0.02562 * 10 9 8 12 12 C 1.50693 * 120.00106 * 180.02562 * 10 9 8 13 13 O 1.42903 * 109.47218 * 180.02562 * 12 10 9 14 14 C 1.35897 * 117.00214 * 179.97438 * 13 12 10 15 15 C 1.38709 * 120.05637 * 359.95484 * 14 13 12 16 16 C 1.38172 * 119.94642 * 179.97438 * 15 14 13 17 17 C 1.38245 * 120.05216 * 0.02562 * 16 15 14 18 18 C 1.38287 * 120.11339 * 0.02562 * 17 16 15 19 19 C 1.38125 * 120.05453 * 359.95334 * 18 17 16 20 20 C 1.50699 * 120.02390 * 180.02562 * 19 18 17 21 21 O 1.42895 * 109.47124 * 105.00291 * 20 19 18 22 22 Si 1.86302 * 109.47415 * 344.99961 * 20 19 18 23 23 H 1.48499 * 109.47007 * 59.99977 * 22 20 19 24 24 H 1.48500 * 109.46966 * 180.02562 * 22 20 19 25 25 H 1.48504 * 109.46711 * 300.00285 * 22 20 19 26 26 C 1.40252 * 107.83893 * 0.26019 * 8 7 6 27 27 N 1.30829 * 108.33236 * 359.55420 * 26 8 7 28 28 H 1.08995 * 109.46972 * 300.00260 * 1 2 3 29 29 H 1.09002 * 109.46889 * 60.00061 * 1 2 3 30 30 H 1.09004 * 109.47027 * 179.97438 * 1 2 3 31 31 H 1.08992 * 109.47385 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47210 * 300.00376 * 3 2 1 33 33 H 1.09005 * 109.46802 * 59.99474 * 3 2 1 34 34 H 1.08999 * 109.47118 * 300.00496 * 4 2 1 35 35 H 1.09004 * 109.46519 * 60.00200 * 4 2 1 36 36 H 1.08992 * 109.47318 * 180.02562 * 4 2 1 37 37 H 1.08995 * 109.47086 * 299.99627 * 5 2 1 38 38 H 1.09009 * 109.47236 * 179.97438 * 5 2 1 39 39 H 1.08003 * 126.21507 * 359.97438 * 7 6 5 40 40 H 0.96999 * 120.00059 * 0.02562 * 9 8 7 41 41 H 1.08997 * 109.47633 * 60.00409 * 12 10 9 42 42 H 1.09008 * 109.47230 * 300.00084 * 12 10 9 43 43 H 1.08002 * 120.02844 * 0.04164 * 15 14 13 44 44 H 1.08002 * 119.97211 * 180.29545 * 16 15 14 45 45 H 1.07997 * 119.93859 * 179.97438 * 17 16 15 46 46 H 1.07998 * 119.97069 * 179.97438 * 18 17 16 47 47 H 1.09005 * 109.46839 * 225.00112 * 20 19 18 48 48 H 0.96697 * 114.00132 * 59.99807 * 21 20 19 49 49 H 1.07999 * 125.83682 * 179.73992 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4841 -0.8783 -1.5212 5 6 2.4839 -0.8783 1.5212 6 7 1.9956 -2.2594 1.5211 7 6 2.6257 -3.3300 0.9722 8 6 1.8452 -4.4196 1.1879 9 7 2.1290 -5.7365 0.7797 10 6 1.2634 -6.7306 1.0609 11 8 0.2395 -6.4903 1.6654 12 6 1.5675 -8.1405 0.6244 13 8 0.5071 -9.0057 1.0358 14 6 0.6259 -10.3216 0.7177 15 6 1.7394 -10.7707 0.0231 16 6 1.8581 -12.1091 -0.2987 17 6 0.8679 -13.0004 0.0706 18 6 -0.2437 -12.5550 0.7621 19 6 -0.3668 -11.2181 1.0865 20 6 -1.5782 -10.7336 1.8407 21 8 -1.2205 -10.4721 3.1992 22 14 -2.9058 -12.0396 1.7884 23 1 -2.3984 -13.2865 2.4154 24 1 -4.0997 -11.5618 2.5310 25 1 -3.2774 -12.3113 0.3765 26 6 0.7027 -3.9988 1.8841 27 7 0.7965 -2.7099 2.0878 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.5741 1.7563 0.0005 32 1 2.1208 2.2703 -0.8900 33 1 2.1207 2.2702 0.8900 34 1 2.1207 -1.9059 -1.5212 35 1 2.1207 -0.3644 -2.4111 36 1 3.5740 -0.8787 -1.5209 37 1 2.1206 -0.3644 2.4111 38 1 3.5740 -0.8787 1.5210 39 1 3.5751 -3.3169 0.4576 40 1 2.9480 -5.9287 0.2967 41 1 2.5018 -8.4684 1.0800 42 1 1.6616 -8.1725 -0.4611 43 1 2.5136 -10.0749 -0.2649 44 1 2.7272 -12.4601 -0.8352 45 1 0.9624 -14.0461 -0.1823 46 1 -1.0161 -13.2532 1.0490 47 1 -1.9507 -9.8183 1.3804 48 1 -0.5326 -9.8004 3.3025 49 1 -0.1134 -4.6312 2.2008 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_2989392.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:34:28 Heat of formation + Delta-G solvation = -31.377804 kcal Electronic energy + Delta-G solvation = -29661.050128 eV Core-core repulsion = 25521.304037 eV Total energy + Delta-G solvation = -4139.746091 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.157 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.34005 -41.58118 -40.37737 -38.48444 -37.28715 -35.91407 -33.73343 -32.73203 -31.52102 -30.70630 -29.76029 -29.22048 -28.59115 -28.45984 -26.84522 -26.54797 -23.95497 -22.81070 -22.57672 -22.08369 -21.02073 -19.47451 -18.63020 -18.17899 -17.89820 -17.60909 -17.19310 -16.71357 -16.61430 -16.43896 -15.83185 -15.57980 -15.48065 -15.18969 -15.05502 -14.86161 -14.39338 -14.33918 -14.29124 -14.09342 -13.97433 -13.91093 -13.77636 -13.56950 -13.48883 -13.43814 -13.27658 -13.19129 -12.76302 -12.64060 -12.35373 -12.16713 -12.07329 -11.68389 -11.65048 -11.39851 -11.08119 -11.06642 -10.95945 -10.89907 -10.81256 -10.05204 -9.97270 -9.26330 -8.64467 0.21145 0.35794 0.69354 1.11360 1.27295 1.34670 1.48982 1.51610 1.62523 1.65950 1.67601 1.91798 2.10977 2.11277 2.38716 2.49092 2.66907 3.35083 3.60522 3.65678 3.74186 3.77890 3.80162 3.83666 4.01107 4.10127 4.22192 4.24471 4.30603 4.45576 4.47443 4.53687 4.55948 4.58428 4.59596 4.61722 4.66541 4.71042 4.75191 4.78454 4.93907 5.07496 5.20478 5.30237 5.32806 5.37193 5.47339 5.55725 5.63295 5.87569 5.98421 6.16187 6.29046 6.77145 6.78205 7.02809 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.020 2.980 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.169 4.169 6 N -0.343 5.343 7 C 0.017 3.983 8 C -0.006 4.006 9 N -0.639 5.639 10 C 0.516 3.484 11 O -0.500 6.500 12 C 0.045 3.955 13 O -0.289 6.289 14 C 0.138 3.862 15 C -0.207 4.207 16 C -0.076 4.076 17 C -0.146 4.146 18 C -0.084 4.084 19 C -0.138 4.138 20 C -0.085 4.085 21 O -0.538 6.538 22 Si 1.016 2.984 23 H -0.253 1.253 24 H -0.256 1.256 25 H -0.249 1.249 26 C 0.048 3.952 27 N -0.280 5.280 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.075 0.925 33 H 0.072 0.928 34 H 0.069 0.931 35 H 0.074 0.926 36 H 0.070 0.930 37 H 0.105 0.895 38 H 0.099 0.901 39 H 0.177 0.823 40 H 0.411 0.589 41 H 0.098 0.902 42 H 0.097 0.903 43 H 0.130 0.870 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.132 0.868 47 H 0.078 0.922 48 H 0.370 0.630 49 H 0.205 0.795 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.245 1.370 -5.381 9.128 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.215 2.785 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.335 4.335 6 N -0.126 5.126 7 C -0.131 4.131 8 C -0.110 4.110 9 N -0.286 5.286 10 C 0.302 3.698 11 O -0.373 6.373 12 C -0.034 4.034 13 O -0.201 6.201 14 C 0.092 3.908 15 C -0.225 4.225 16 C -0.094 4.094 17 C -0.164 4.164 18 C -0.102 4.102 19 C -0.139 4.139 20 C -0.194 4.194 21 O -0.343 6.343 22 Si 0.836 3.164 23 H -0.177 1.177 24 H -0.180 1.180 25 H -0.173 1.173 26 C -0.138 4.138 27 N -0.103 5.103 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.094 0.906 33 H 0.092 0.908 34 H 0.089 0.911 35 H 0.093 0.907 36 H 0.089 0.911 37 H 0.124 0.876 38 H 0.117 0.883 39 H 0.194 0.806 40 H 0.246 0.754 41 H 0.115 0.885 42 H 0.115 0.885 43 H 0.148 0.852 44 H 0.147 0.853 45 H 0.147 0.853 46 H 0.150 0.850 47 H 0.096 0.904 48 H 0.218 0.782 49 H 0.221 0.779 Dipole moment (debyes) X Y Z Total from point charges 4.760 1.671 -4.188 6.556 hybrid contribution 2.305 -0.008 -0.859 2.460 sum 7.065 1.663 -5.047 8.840 Atomic orbital electron populations 1.26074 1.20046 1.04922 1.04442 0.79363 0.68097 0.66381 0.64709 1.26099 1.06374 1.18241 1.05114 1.26127 1.06113 1.08266 1.15253 1.26977 1.04452 0.83171 1.18916 1.48000 1.15645 1.06409 1.42498 1.21864 1.00164 0.86477 1.04609 1.17582 0.98710 0.84358 1.10366 1.42478 1.23942 1.04666 1.57476 1.19989 0.83791 0.85815 0.80247 1.90679 1.25187 1.82920 1.38507 1.22370 0.91447 0.87983 1.01563 1.86094 1.43625 1.15367 1.75010 1.18769 0.94329 0.82428 0.95237 1.21259 0.98663 0.97731 1.04896 1.21019 0.98532 0.92390 0.97473 1.21096 0.94469 1.00319 1.00566 1.21021 0.98419 0.93862 0.96885 1.19676 0.97531 0.92749 1.03942 1.25231 1.01003 1.08777 0.84344 1.86657 1.61411 1.63370 1.22885 0.84453 0.75666 0.76003 0.80255 1.17690 1.17975 1.17289 1.24485 0.98878 0.91823 0.98659 1.77486 1.01151 1.12243 1.19427 0.91006 0.91216 0.91000 0.90976 0.90559 0.90846 0.91144 0.90721 0.91124 0.87629 0.88270 0.80622 0.75386 0.88452 0.88484 0.85189 0.85299 0.85253 0.85022 0.90370 0.78157 0.77878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.18 8.65 101.05 0.87 1.06 16 2 Si 1.02 -3.47 12.79 -169.99 -2.17 -5.64 16 3 C -0.45 1.42 8.65 101.05 0.87 2.29 16 4 C -0.45 1.25 8.65 101.05 0.87 2.12 16 5 C -0.17 0.39 5.59 59.84 0.33 0.72 16 6 N -0.34 -0.24 3.01 -9.17 -0.03 -0.26 16 7 C 0.02 -0.01 11.44 -16.68 -0.19 -0.20 16 8 C -0.01 -0.01 6.90 -83.89 -0.58 -0.59 16 9 N -0.64 1.02 5.47 -10.04 -0.05 0.97 16 10 C 0.52 0.23 7.88 -10.99 -0.09 0.15 16 11 O -0.50 -2.35 13.66 -14.37 -0.20 -2.54 16 12 C 0.05 -0.10 5.22 36.00 0.19 0.09 16 13 O -0.29 -0.39 8.58 -39.32 -0.34 -0.73 16 14 C 0.14 0.18 6.62 -39.22 -0.26 -0.08 16 15 C -0.21 0.12 9.04 -39.43 -0.36 -0.23 16 16 C -0.08 0.05 10.04 -39.60 -0.40 -0.35 16 17 C -0.15 -0.01 10.04 -39.56 -0.40 -0.41 16 18 C -0.08 -0.11 8.66 -39.61 -0.34 -0.46 16 19 C -0.14 -0.30 5.28 -104.47 -0.55 -0.86 16 20 C -0.09 -0.22 2.33 36.01 0.08 -0.14 16 21 O -0.54 -2.03 12.65 -35.23 -0.45 -2.48 16 22 Si 1.02 1.77 25.75 -169.99 -4.38 -2.61 16 23 H -0.25 -0.48 6.73 56.52 0.38 -0.10 16 24 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 25 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 26 C 0.05 0.18 10.84 -17.22 -0.19 -0.01 16 27 N -0.28 -1.09 12.56 30.70 0.39 -0.71 16 28 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 29 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 30 H 0.07 0.11 7.96 -51.93 -0.41 -0.30 16 31 H 0.07 -0.26 7.96 -51.93 -0.41 -0.68 16 32 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 33 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 34 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 35 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 36 H 0.07 -0.26 7.96 -51.93 -0.41 -0.67 16 37 H 0.11 -0.22 7.96 -51.93 -0.41 -0.63 16 38 H 0.10 -0.45 7.96 -51.92 -0.41 -0.86 16 39 H 0.18 -0.80 8.06 -52.48 -0.42 -1.22 16 40 H 0.41 -2.30 8.83 -40.82 -0.36 -2.66 16 41 H 0.10 -0.45 7.66 -51.93 -0.40 -0.85 16 42 H 0.10 -0.45 7.66 -51.92 -0.40 -0.84 16 43 H 0.13 -0.45 6.30 -52.49 -0.33 -0.78 16 44 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 45 H 0.13 -0.24 8.06 -52.49 -0.42 -0.67 16 46 H 0.13 0.04 4.89 -52.49 -0.26 -0.22 16 47 H 0.08 0.19 7.83 -51.93 -0.41 -0.22 16 48 H 0.37 0.82 8.61 45.56 0.39 1.21 16 49 H 0.20 0.98 5.92 -52.49 -0.31 0.66 16 LS Contribution 410.71 15.07 6.19 6.19 Total: 0.00 -9.98 410.71 -7.86 -17.84 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -6.70 Total: -13.14 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -0.12 Total: 3.12 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: 0.30 Total: 0.00 kcal Atomic # 8 Polarization: -4.77 SS G_CDS: -0.98 Total: -5.75 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -6.55 Total: -8.25 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -9.98 -7.86 -17.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_2989392.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.541 kcal (2) G-P(sol) polarization free energy of solvation -9.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.378 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds