Wall clock time and date at job start Sun Mar 7 2021 10:34:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86303 * 109.47161 * 2 1 4 4 C 1.86299 * 109.47217 * 119.99499 * 2 1 3 5 5 C 1.86293 * 109.47364 * 239.99588 * 2 1 3 6 6 N 1.46505 * 109.46974 * 60.00146 * 5 2 1 7 7 C 1.35809 * 126.05363 * 90.00371 * 6 5 2 8 8 C 1.35753 * 107.56243 * 179.97438 * 7 6 5 9 9 N 1.40770 * 126.08077 * 179.97438 * 8 7 6 10 10 C 1.34779 * 119.99880 * 179.97438 * 9 8 7 11 11 O 1.21308 * 119.99988 * 359.97438 * 10 9 8 12 12 C 1.50700 * 119.99724 * 180.02562 * 10 9 8 13 13 O 1.42900 * 109.46872 * 179.97438 * 12 10 9 14 14 C 1.35904 * 116.99896 * 179.97438 * 13 12 10 15 15 C 1.38726 * 120.05579 * 359.73089 * 14 13 12 16 16 C 1.38147 * 119.94390 * 179.74335 * 15 14 13 17 17 C 1.38261 * 120.05479 * 0.50255 * 16 15 14 18 18 C 1.50700 * 119.94367 * 179.74577 * 17 16 15 19 19 O 1.42901 * 109.47316 * 245.02281 * 18 17 16 20 20 Si 1.86295 * 109.47300 * 5.02500 * 18 17 16 21 21 H 1.48508 * 109.46972 * 59.99658 * 20 18 17 22 22 H 1.48498 * 109.47352 * 179.97438 * 20 18 17 23 23 H 1.48493 * 109.46951 * 300.00061 * 20 18 17 24 24 C 1.38265 * 120.11041 * 359.77399 * 17 16 15 25 25 C 1.38141 * 120.05788 * 359.97089 * 24 17 16 26 26 C 1.40255 * 107.84084 * 359.97438 * 8 7 6 27 27 N 1.30830 * 108.33140 * 359.75546 * 26 8 7 28 28 H 1.09001 * 109.46570 * 60.00396 * 1 2 3 29 29 H 1.09001 * 109.47076 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47204 * 300.00331 * 1 2 3 31 31 H 1.09000 * 109.47332 * 59.99747 * 3 2 1 32 32 H 1.09002 * 109.47176 * 179.97438 * 3 2 1 33 33 H 1.09004 * 109.46801 * 299.99758 * 3 2 1 34 34 H 1.09001 * 109.47058 * 60.00032 * 4 2 1 35 35 H 1.09002 * 109.47782 * 180.02562 * 4 2 1 36 36 H 1.09000 * 109.47172 * 300.00189 * 4 2 1 37 37 H 1.09002 * 109.47236 * 180.02562 * 5 2 1 38 38 H 1.08998 * 109.47688 * 299.99834 * 5 2 1 39 39 H 1.08002 * 126.22167 * 359.93915 * 7 6 5 40 40 H 0.96996 * 120.00001 * 0.02562 * 9 8 7 41 41 H 1.09003 * 109.47022 * 299.99777 * 12 10 9 42 42 H 1.08999 * 109.47369 * 60.00024 * 12 10 9 43 43 H 1.08000 * 120.02978 * 359.97438 * 15 14 13 44 44 H 1.08002 * 119.97055 * 180.23029 * 16 15 14 45 45 H 1.09010 * 109.46703 * 125.02821 * 18 17 16 46 46 H 0.96700 * 113.99698 * 59.99717 * 19 18 17 47 47 H 1.08000 * 119.97190 * 179.97438 * 24 17 16 48 48 H 1.08003 * 120.03042 * 179.97438 * 25 24 17 49 49 H 1.08000 * 125.83430 * 179.97438 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8781 1.5212 5 6 2.4841 -0.8783 -1.5210 6 7 1.9957 -0.1877 -2.7172 7 6 2.6259 0.8229 -3.3699 8 6 1.8455 1.1808 -4.4215 9 7 2.1293 2.1928 -5.3579 10 6 1.2637 2.4462 -6.3594 11 8 0.2402 1.8019 -6.4541 12 6 1.5678 3.5292 -7.3623 13 8 0.5081 3.6046 -8.3179 14 6 0.6270 4.5380 -9.2986 15 6 1.7380 5.3679 -9.3370 16 6 1.8590 6.3123 -10.3380 17 6 0.8691 6.4377 -11.2950 18 6 1.0010 7.4725 -12.3825 19 8 -0.0338 8.4478 -12.2401 20 14 2.6620 8.3055 -12.2490 21 1 3.7373 7.2920 -12.3970 22 1 2.7922 9.3249 -13.3210 23 1 2.7807 8.9631 -10.9229 24 6 -0.2419 5.6155 -11.2557 25 6 -0.3651 4.6661 -10.2598 26 6 0.7061 0.3630 -4.4090 27 7 0.7996 -0.4574 -3.3942 28 1 -0.3632 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5139 0.8899 31 1 2.1207 2.2704 0.8899 32 1 3.5740 1.7565 0.0005 33 1 2.1207 2.2703 -0.8901 34 1 2.1207 -1.9058 1.5213 35 1 3.5740 -0.8777 1.5215 36 1 2.1207 -0.3642 2.4111 37 1 3.5741 -0.8787 -1.5207 38 1 2.1208 -1.9060 -1.5210 39 1 3.5750 1.2625 -3.1010 40 1 2.9482 2.7072 -5.2829 41 1 1.6619 4.4853 -6.8472 42 1 2.5022 3.2987 -7.8739 43 1 2.5094 5.2733 -8.5871 44 1 2.7255 6.9561 -10.3704 45 1 0.9137 6.9897 -13.3560 46 1 -0.0175 8.9179 -11.3953 47 1 -1.0140 5.7157 -12.0041 48 1 -1.2334 4.0244 -10.2293 49 1 -0.1076 0.4015 -5.1181 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:34:42 Heat of formation + Delta-G solvation = -28.677816 kcal Electronic energy + Delta-G solvation = -28868.480786 eV Core-core repulsion = 24728.851775 eV Total energy + Delta-G solvation = -4139.629011 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.157 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.32749 -41.46497 -40.37905 -38.99196 -37.14850 -35.89764 -33.72944 -32.45395 -31.79047 -30.91086 -29.77356 -29.31565 -28.59208 -28.46050 -26.89775 -26.18779 -24.17657 -23.03319 -22.38622 -22.00404 -21.05681 -19.53746 -18.72293 -18.21793 -17.91839 -17.55589 -17.01418 -16.83752 -16.45703 -16.36952 -16.04360 -15.66563 -15.46746 -15.22651 -15.06443 -14.89932 -14.44938 -14.39033 -14.33824 -14.14892 -13.97815 -13.88753 -13.76190 -13.61096 -13.55546 -13.50873 -13.43657 -13.27593 -13.19028 -12.32207 -12.28901 -12.18719 -12.11262 -12.06713 -11.68066 -11.60095 -11.39261 -11.06598 -10.95898 -10.87190 -10.41646 -10.05474 -10.04763 -9.24010 -8.63750 0.27123 0.28454 0.70066 1.13008 1.13473 1.28666 1.38951 1.47881 1.50164 1.52670 1.65987 1.88448 1.92591 2.12125 2.38823 2.52666 2.64588 3.36637 3.47640 3.62397 3.66945 3.70583 3.82737 3.83709 3.84132 3.86083 4.23086 4.24391 4.42095 4.45826 4.52764 4.53682 4.56111 4.58554 4.59730 4.61538 4.66556 4.71511 4.75222 4.78450 4.93281 5.08330 5.13759 5.22912 5.30309 5.37266 5.49325 5.55730 5.66473 5.88232 5.99018 6.19313 6.32273 6.54776 6.77777 7.04741 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.019 2.981 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.169 4.169 6 N -0.343 5.343 7 C 0.017 3.983 8 C -0.006 4.006 9 N -0.639 5.639 10 C 0.516 3.484 11 O -0.500 6.500 12 C 0.045 3.955 13 O -0.287 6.287 14 C 0.134 3.866 15 C -0.206 4.206 16 C -0.084 4.084 17 C -0.157 4.157 18 C -0.076 4.076 19 O -0.539 6.539 20 Si 0.949 3.051 21 H -0.251 1.251 22 H -0.254 1.254 23 H -0.253 1.253 24 C -0.048 4.048 25 C -0.144 4.144 26 C 0.048 3.952 27 N -0.280 5.280 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.069 0.931 31 H 0.074 0.926 32 H 0.070 0.930 33 H 0.070 0.930 34 H 0.072 0.928 35 H 0.071 0.929 36 H 0.075 0.925 37 H 0.099 0.901 38 H 0.105 0.895 39 H 0.177 0.823 40 H 0.411 0.589 41 H 0.098 0.902 42 H 0.097 0.903 43 H 0.131 0.869 44 H 0.123 0.877 45 H 0.117 0.883 46 H 0.376 0.624 47 H 0.137 0.863 48 H 0.137 0.863 49 H 0.205 0.795 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.823 2.539 3.595 8.119 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.214 2.786 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.335 4.335 6 N -0.126 5.126 7 C -0.131 4.131 8 C -0.110 4.110 9 N -0.286 5.286 10 C 0.302 3.698 11 O -0.373 6.373 12 C -0.034 4.034 13 O -0.199 6.199 14 C 0.089 3.911 15 C -0.225 4.225 16 C -0.102 4.102 17 C -0.158 4.158 18 C -0.187 4.187 19 O -0.344 6.344 20 Si 0.772 3.228 21 H -0.175 1.175 22 H -0.178 1.178 23 H -0.177 1.177 24 C -0.066 4.066 25 C -0.163 4.163 26 C -0.139 4.139 27 N -0.103 5.103 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.088 0.912 31 H 0.093 0.907 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.092 0.908 35 H 0.090 0.910 36 H 0.094 0.906 37 H 0.117 0.883 38 H 0.124 0.876 39 H 0.194 0.806 40 H 0.246 0.754 41 H 0.115 0.885 42 H 0.115 0.885 43 H 0.149 0.851 44 H 0.141 0.859 45 H 0.135 0.865 46 H 0.223 0.777 47 H 0.154 0.846 48 H 0.155 0.845 49 H 0.221 0.779 Dipole moment (debyes) X Y Z Total from point charges 6.083 1.093 3.685 7.195 hybrid contribution 1.016 0.889 0.140 1.357 sum 7.098 1.982 3.825 8.303 Atomic orbital electron populations 1.26074 1.20037 1.04856 1.04524 0.79376 0.68122 0.67074 0.64071 1.26128 1.06117 1.18628 1.04898 1.26097 1.06377 1.08352 1.14984 1.26973 1.04462 1.05211 0.96861 1.48003 1.15777 1.26741 1.22059 1.21862 1.00127 0.95732 0.95392 1.17593 0.98746 0.98772 0.95897 1.42486 1.23949 1.35658 1.26510 1.20009 0.83762 0.84594 0.81476 1.90677 1.25281 1.48694 1.72681 1.22370 0.91540 0.98984 0.90544 1.86169 1.43476 1.53314 1.36936 1.19061 0.94583 0.88707 0.88748 1.21146 0.99129 0.99821 1.02358 1.20829 0.98060 0.97509 0.93827 1.20224 0.96424 1.00483 0.98650 1.24905 1.02609 0.91106 1.00052 1.86523 1.52822 1.53217 1.41844 0.85708 0.75615 0.80421 0.81083 1.17470 1.17787 1.17681 1.20867 0.96726 0.92263 0.96742 1.20554 0.99407 1.01511 0.94813 1.24489 0.98933 0.93202 0.97245 1.77482 1.01340 1.23048 1.08451 0.90998 0.91002 0.91198 0.90716 0.91117 0.91126 0.90835 0.90969 0.90553 0.88271 0.87631 0.80603 0.75373 0.88469 0.88477 0.85119 0.85904 0.86480 0.77690 0.84556 0.84519 0.77885 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.14 8.65 101.05 0.87 1.02 16 2 Si 1.02 -3.35 12.79 -169.99 -2.17 -5.52 16 3 C -0.45 1.20 8.65 101.05 0.87 2.07 16 4 C -0.45 1.39 8.65 101.05 0.87 2.26 16 5 C -0.17 0.37 5.59 59.85 0.33 0.70 16 6 N -0.34 -0.29 3.01 -9.17 -0.03 -0.32 16 7 C 0.02 -0.01 11.44 -16.68 -0.19 -0.20 16 8 C -0.01 -0.01 6.90 -83.88 -0.58 -0.59 16 9 N -0.64 0.79 5.47 -10.03 -0.05 0.74 16 10 C 0.52 0.55 7.88 -10.98 -0.09 0.46 16 11 O -0.50 -2.77 13.66 -14.37 -0.20 -2.96 16 12 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 13 O -0.29 -0.63 9.67 -39.35 -0.38 -1.02 16 14 C 0.13 0.18 6.69 -39.22 -0.26 -0.08 16 15 C -0.21 0.09 9.04 -39.43 -0.36 -0.26 16 16 C -0.08 0.03 8.66 -39.61 -0.34 -0.31 16 17 C -0.16 -0.01 5.35 -104.60 -0.56 -0.57 16 18 C -0.08 0.06 2.80 36.01 0.10 0.16 16 19 O -0.54 -0.05 12.83 -35.23 -0.45 -0.50 16 20 Si 0.95 -0.99 25.13 -169.99 -4.27 -5.27 16 21 H -0.25 0.13 7.11 56.52 0.40 0.53 16 22 H -0.25 -0.15 7.11 56.52 0.40 0.26 16 23 H -0.25 0.27 7.04 56.52 0.40 0.67 16 24 C -0.05 -0.03 9.68 -39.61 -0.38 -0.41 16 25 C -0.14 -0.20 9.99 -39.43 -0.39 -0.59 16 26 C 0.05 0.19 10.84 -17.22 -0.19 0.01 16 27 N -0.28 -1.15 12.56 30.70 0.39 -0.76 16 28 H 0.07 0.12 7.96 -51.93 -0.41 -0.30 16 29 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 30 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 31 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 32 H 0.07 -0.25 7.96 -51.93 -0.41 -0.67 16 33 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 34 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 35 H 0.07 -0.26 7.96 -51.93 -0.41 -0.67 16 36 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 37 H 0.10 -0.44 7.96 -51.93 -0.41 -0.85 16 38 H 0.11 -0.21 7.96 -51.93 -0.41 -0.62 16 39 H 0.18 -0.78 8.06 -52.49 -0.42 -1.20 16 40 H 0.41 -2.20 8.83 -40.82 -0.36 -2.56 16 41 H 0.10 -0.42 7.65 -51.93 -0.40 -0.82 16 42 H 0.10 -0.41 7.68 -51.93 -0.40 -0.81 16 43 H 0.13 -0.43 6.30 -52.49 -0.33 -0.76 16 44 H 0.12 -0.22 4.86 -52.49 -0.25 -0.48 16 45 H 0.12 -0.17 7.96 -51.92 -0.41 -0.59 16 46 H 0.38 -1.14 8.70 45.56 0.40 -0.75 16 47 H 0.14 -0.07 8.06 -52.49 -0.42 -0.49 16 48 H 0.14 0.12 8.06 -52.48 -0.42 -0.30 16 49 H 0.20 1.04 5.92 -52.49 -0.31 0.73 16 LS Contribution 412.07 15.07 6.21 6.21 Total: 0.00 -10.81 412.07 -7.74 -18.55 By element: Atomic # 1 Polarization: -6.24 SS G_CDS: -6.69 Total: -12.92 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: -0.10 Total: 3.78 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: 0.30 Total: -0.34 kcal Atomic # 8 Polarization: -3.45 SS G_CDS: -1.03 Total: -4.48 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: -6.45 Total: -10.79 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -10.81 -7.74 -18.55 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.125 kcal (2) G-P(sol) polarization free energy of solvation -10.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.744 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.553 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.678 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds