Wall clock time and date at job start Sun Mar 7 2021 10:41:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86304 * 1 3 3 C 1.86305 * 109.47263 * 2 1 4 4 C 1.86296 * 109.47186 * 239.99530 * 2 1 3 5 5 C 1.86299 * 109.46625 * 119.99818 * 2 1 3 6 6 N 1.46501 * 109.47321 * 59.99872 * 5 2 1 7 7 C 1.35808 * 126.05180 * 90.00117 * 6 5 2 8 8 C 1.35759 * 107.56510 * 179.97438 * 7 6 5 9 9 N 1.40760 * 126.08004 * 179.97438 * 8 7 6 10 10 C 1.34782 * 119.99719 * 179.97438 * 9 8 7 11 11 O 1.21309 * 119.99775 * 359.97438 * 10 9 8 12 12 C 1.50694 * 119.99926 * 180.02562 * 10 9 8 13 13 O 1.42901 * 109.46937 * 180.02562 * 12 10 9 14 14 C 1.35905 * 116.99604 * 180.02562 * 13 12 10 15 15 C 1.38701 * 120.05928 * 359.72208 * 14 13 12 16 16 C 1.38166 * 119.94369 * 179.71820 * 15 14 13 17 17 C 1.38238 * 120.05745 * 0.53837 * 16 15 14 18 18 C 1.50706 * 119.94775 * 179.73853 * 17 16 15 19 19 O 1.42899 * 109.47182 * 245.02385 * 18 17 16 20 20 Si 1.86295 * 109.46935 * 5.02436 * 18 17 16 21 21 H 1.48497 * 109.47203 * 59.99660 * 20 18 17 22 22 H 1.48496 * 109.47327 * 179.97438 * 20 18 17 23 23 H 1.48510 * 109.47177 * 299.99670 * 20 18 17 24 24 C 1.38291 * 120.10926 * 359.76415 * 17 16 15 25 25 C 1.38119 * 120.05500 * 359.95562 * 24 17 16 26 26 N 1.48006 * 120.02627 * 180.02562 * 25 24 17 27 27 O 1.21799 * 120.00163 * 359.96932 * 26 25 24 28 28 O 1.21805 * 119.99918 * 179.97438 * 26 25 24 29 29 C 1.40254 * 107.83470 * 0.25651 * 8 7 6 30 30 N 1.30830 * 108.33525 * 359.55980 * 29 8 7 31 31 H 1.09002 * 109.47284 * 300.00624 * 1 2 3 32 32 H 1.09007 * 109.46764 * 60.00009 * 1 2 3 33 33 H 1.08996 * 109.47439 * 180.02562 * 1 2 3 34 34 H 1.08998 * 109.46777 * 179.97438 * 3 2 1 35 35 H 1.09003 * 109.46557 * 299.99952 * 3 2 1 36 36 H 1.08995 * 109.47109 * 59.99621 * 3 2 1 37 37 H 1.08996 * 109.47315 * 300.00546 * 4 2 1 38 38 H 1.09007 * 109.46893 * 60.00540 * 4 2 1 39 39 H 1.08997 * 109.46757 * 180.02562 * 4 2 1 40 40 H 1.09006 * 109.47368 * 299.99611 * 5 2 1 41 41 H 1.09006 * 109.46778 * 180.02562 * 5 2 1 42 42 H 1.08005 * 126.22147 * 359.97438 * 7 6 5 43 43 H 0.96995 * 120.00348 * 0.02562 * 9 8 7 44 44 H 1.08999 * 109.47314 * 60.00033 * 12 10 9 45 45 H 1.08998 * 109.47471 * 300.00068 * 12 10 9 46 46 H 1.08001 * 120.02725 * 0.02562 * 15 14 13 47 47 H 1.08007 * 119.97106 * 180.27414 * 16 15 14 48 48 H 1.09001 * 109.46537 * 125.02325 * 18 17 16 49 49 H 0.96701 * 114.00449 * 59.99872 * 19 18 17 50 50 H 1.08008 * 119.97030 * 179.97438 * 24 17 16 51 51 H 1.07996 * 125.83343 * 179.73783 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7565 0.0000 4 6 2.4840 -0.8783 -1.5210 5 6 2.4839 -0.8782 1.5212 6 7 1.9955 -2.2594 1.5213 7 6 2.6256 -3.3300 0.9724 8 6 1.8451 -4.4197 1.1882 9 7 2.1290 -5.7365 0.7800 10 6 1.2633 -6.7306 1.0612 11 8 0.2398 -6.4904 1.6665 12 6 1.5674 -8.1405 0.6248 13 8 0.5070 -9.0056 1.0362 14 6 0.6264 -10.3217 0.7190 15 6 1.7380 -10.7702 0.0212 16 6 1.8597 -12.1097 -0.2949 17 6 0.8694 -13.0009 0.0739 18 6 1.0019 -14.4604 -0.2773 19 8 -0.0314 -14.8253 -1.1945 20 14 2.6642 -14.7617 -1.0625 21 1 3.7379 -14.3825 -0.1094 22 1 2.7951 -16.2000 -1.4081 23 1 2.7849 -13.9429 -2.2956 24 6 -0.2429 -12.5552 0.7642 25 6 -0.3665 -11.2182 1.0877 26 7 -1.5570 -10.7420 1.8270 27 8 -2.4285 -11.5292 2.1500 28 8 -1.6653 -9.5628 2.1124 29 6 0.7027 -3.9987 1.8844 30 7 0.7964 -2.7098 2.0880 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5139 -0.8901 33 1 -0.3634 -1.0276 0.0005 34 1 3.5741 1.7564 0.0005 35 1 2.1207 2.2702 -0.8900 36 1 2.1207 2.2703 0.8899 37 1 2.1207 -1.9059 -1.5210 38 1 2.1208 -0.3645 -2.4111 39 1 3.5740 -0.8787 -1.5207 40 1 2.1206 -0.3643 2.4112 41 1 3.5739 -0.8778 1.5215 42 1 3.5750 -3.3169 0.4578 43 1 2.9478 -5.9288 0.2970 44 1 2.5018 -8.4683 1.0803 45 1 1.6615 -8.1726 -0.4607 46 1 2.5102 -10.0737 -0.2704 47 1 2.7273 -12.4601 -0.8344 48 1 0.9132 -15.0614 0.6278 49 1 -0.0138 -14.3294 -2.0245 50 1 -1.0155 -13.2534 1.0510 51 1 -0.1135 -4.6311 2.2011 RHF calculation, no. of doubly occupied orbitals= 73 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:41:40 Heat of formation + Delta-G solvation = -20.652830 kcal Electronic energy + Delta-G solvation = -35669.251073 eV Core-core repulsion = 30698.953616 eV Total energy + Delta-G solvation = -4970.297457 eV No. of doubly occupied orbitals = 73 Molecular weight (most abundant/longest-lived isotopes) = 408.152 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -43.02241 -42.34050 -41.68850 -40.57516 -39.45394 -37.56265 -37.11742 -35.93232 -33.77083 -33.48839 -32.42343 -31.09625 -29.81416 -29.49379 -28.60056 -28.45646 -27.60379 -27.02088 -26.59129 -24.28133 -23.04861 -22.74045 -22.13804 -21.14315 -20.42893 -19.46050 -19.29576 -18.65189 -18.38670 -18.34215 -18.05471 -17.71682 -17.22014 -16.77060 -16.55457 -16.47984 -16.28702 -15.86889 -15.63745 -15.57725 -15.25875 -15.00345 -14.39653 -14.34021 -14.28415 -14.21242 -14.07801 -13.99262 -13.89928 -13.81737 -13.57802 -13.44088 -13.31778 -13.27268 -13.18740 -12.65414 -12.56460 -12.38491 -12.19897 -12.18801 -11.98259 -11.84180 -11.72127 -11.67271 -11.39724 -11.06833 -10.95952 -10.94018 -10.92304 -10.75425 -10.04919 -9.93339 -8.64921 -1.13923 -0.39383 0.38043 0.52101 0.68980 0.86538 0.95339 1.15464 1.23602 1.23955 1.39378 1.50772 1.65621 1.67453 1.87931 1.91867 2.10417 2.22969 2.38970 2.96556 2.99882 3.18180 3.25188 3.34846 3.49204 3.53536 3.58504 3.65751 3.68843 3.82912 4.12371 4.16180 4.23130 4.33918 4.41009 4.45779 4.53203 4.55763 4.58169 4.59070 4.61267 4.65562 4.71415 4.76036 4.79487 4.91555 5.06636 5.29794 5.36805 5.42019 5.56907 5.69825 5.89090 5.98240 6.22444 6.29089 6.77607 6.94614 7.01236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.019 2.981 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.169 4.169 6 N -0.343 5.343 7 C 0.018 3.982 8 C -0.006 4.006 9 N -0.638 5.638 10 C 0.514 3.486 11 O -0.485 6.485 12 C 0.035 3.965 13 O -0.252 6.252 14 C 0.200 3.800 15 C -0.209 4.209 16 C -0.034 4.034 17 C -0.157 4.157 18 C -0.078 4.078 19 O -0.534 6.534 20 Si 0.948 3.052 21 H -0.247 1.247 22 H -0.245 1.245 23 H -0.249 1.249 24 C 0.012 3.988 25 C -0.074 4.074 26 N 0.028 4.972 27 O -0.176 6.176 28 O -0.117 6.117 29 C 0.049 3.951 30 N -0.279 5.279 31 H 0.071 0.929 32 H 0.069 0.931 33 H 0.071 0.929 34 H 0.071 0.929 35 H 0.075 0.925 36 H 0.073 0.927 37 H 0.069 0.931 38 H 0.074 0.926 39 H 0.069 0.931 40 H 0.105 0.895 41 H 0.099 0.901 42 H 0.176 0.824 43 H 0.410 0.590 44 H 0.104 0.896 45 H 0.104 0.896 46 H 0.156 0.844 47 H 0.143 0.857 48 H 0.125 0.875 49 H 0.378 0.622 50 H 0.166 0.834 51 H 0.206 0.794 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.654 0.674 -6.855 13.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.213 2.787 3 C -0.558 4.558 4 C -0.557 4.557 5 C -0.335 4.335 6 N -0.126 5.126 7 C -0.131 4.131 8 C -0.110 4.110 9 N -0.286 5.286 10 C 0.298 3.702 11 O -0.356 6.356 12 C -0.043 4.043 13 O -0.162 6.162 14 C 0.151 3.849 15 C -0.228 4.228 16 C -0.051 4.051 17 C -0.159 4.159 18 C -0.189 4.189 19 O -0.339 6.339 20 Si 0.769 3.231 21 H -0.170 1.170 22 H -0.169 1.169 23 H -0.172 1.172 24 C -0.007 4.007 25 C -0.159 4.159 26 N 0.548 4.452 27 O -0.385 6.385 28 O -0.341 6.341 29 C -0.138 4.138 30 N -0.102 5.102 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.094 0.906 36 H 0.092 0.908 37 H 0.089 0.911 38 H 0.093 0.907 39 H 0.089 0.911 40 H 0.124 0.876 41 H 0.117 0.883 42 H 0.194 0.806 43 H 0.245 0.755 44 H 0.122 0.878 45 H 0.122 0.878 46 H 0.174 0.826 47 H 0.160 0.840 48 H 0.143 0.857 49 H 0.226 0.774 50 H 0.184 0.816 51 H 0.223 0.777 Dipole moment (debyes) X Y Z Total from point charges 11.442 1.205 -5.990 12.971 hybrid contribution 0.676 -0.255 -0.646 0.969 sum 12.117 0.950 -6.637 13.849 Atomic orbital electron populations 1.26076 1.20004 1.04964 1.04461 0.79381 0.68151 0.66409 0.64722 1.26096 1.06358 1.18231 1.05131 1.26125 1.06087 1.08273 1.15264 1.26970 1.04432 0.83183 1.18918 1.48008 1.15669 1.06400 1.42498 1.21849 1.00139 0.86478 1.04636 1.17567 0.98765 0.84240 1.10467 1.42425 1.23860 1.04659 1.57652 1.19770 0.84124 0.85498 0.80821 1.90755 1.24764 1.82515 1.37559 1.22619 0.91035 0.88720 1.01948 1.86497 1.43244 1.13629 1.72784 1.18665 0.91886 0.83626 0.90758 1.21243 0.98694 0.97711 1.05134 1.21308 0.97464 0.92456 0.93916 1.20286 0.95099 0.97707 1.02797 1.25022 1.03608 0.91704 0.98551 1.86581 1.52487 1.64666 1.30125 0.85711 0.74646 0.82332 0.80385 1.17030 1.16874 1.17242 1.20855 0.97423 0.91877 0.90496 1.20600 0.90201 0.94394 1.10692 1.43334 1.01295 1.01160 0.99380 1.94559 1.33901 1.52652 1.57364 1.94701 1.83573 0.99554 1.56245 1.24527 0.98883 0.91831 0.98527 1.77501 1.01078 1.12250 1.19379 0.90985 0.91212 0.90966 0.90985 0.90554 0.90826 0.91138 0.90716 0.91138 0.87609 0.88285 0.80643 0.75469 0.87804 0.87810 0.82642 0.83955 0.85679 0.77448 0.81616 0.77744 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.14 8.65 101.05 0.87 1.01 16 2 Si 1.02 -3.43 12.79 -169.99 -2.17 -5.61 16 3 C -0.45 1.42 8.65 101.05 0.87 2.29 16 4 C -0.45 1.27 8.65 101.05 0.87 2.15 16 5 C -0.17 0.38 5.59 59.85 0.33 0.72 16 6 N -0.34 -0.23 3.01 -9.17 -0.03 -0.26 16 7 C 0.02 -0.02 11.44 -16.68 -0.19 -0.21 16 8 C -0.01 -0.01 6.90 -83.88 -0.58 -0.58 16 9 N -0.64 1.26 5.47 -10.04 -0.05 1.21 16 10 C 0.51 0.18 7.88 -10.99 -0.09 0.10 16 11 O -0.48 -2.63 13.66 -14.38 -0.20 -2.82 16 12 C 0.04 -0.11 5.22 36.00 0.19 0.08 16 13 O -0.25 -0.42 7.68 -49.79 -0.38 -0.80 16 14 C 0.20 0.07 6.67 -39.22 -0.26 -0.19 16 15 C -0.21 0.71 9.04 -39.44 -0.36 0.36 16 16 C -0.03 0.12 8.66 -39.61 -0.34 -0.22 16 17 C -0.16 0.36 5.35 -104.60 -0.56 -0.20 16 18 C -0.08 0.24 2.80 36.01 0.10 0.34 16 19 O -0.53 1.00 12.83 -35.23 -0.45 0.55 16 20 Si 0.95 -3.46 25.13 -169.99 -4.27 -7.73 16 21 H -0.25 0.83 7.11 56.52 0.40 1.23 16 22 H -0.25 0.40 7.11 56.52 0.40 0.80 16 23 H -0.25 1.00 7.04 56.52 0.40 1.40 16 24 C 0.01 0.00 9.19 -39.61 -0.36 -0.36 16 25 C -0.07 -0.18 6.87 -79.81 -0.55 -0.73 16 26 N 0.03 0.17 4.45 34.03 0.15 0.33 16 27 O -0.18 -1.23 18.45 -29.46 -0.54 -1.77 16 28 O -0.12 -0.96 17.24 -36.49 -0.63 -1.59 16 29 C 0.05 0.19 10.84 -17.22 -0.19 0.01 16 30 N -0.28 -1.13 12.56 30.70 0.39 -0.74 16 31 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 32 H 0.07 -0.05 7.96 -51.92 -0.41 -0.46 16 33 H 0.07 0.12 7.96 -51.93 -0.41 -0.29 16 34 H 0.07 -0.26 7.96 -51.93 -0.41 -0.68 16 35 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 36 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 37 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 38 H 0.07 -0.18 7.96 -51.92 -0.41 -0.60 16 39 H 0.07 -0.27 7.96 -51.93 -0.41 -0.68 16 40 H 0.11 -0.21 7.96 -51.93 -0.41 -0.63 16 41 H 0.10 -0.45 7.96 -51.93 -0.41 -0.87 16 42 H 0.18 -0.85 8.06 -52.48 -0.42 -1.27 16 43 H 0.41 -2.60 8.83 -40.82 -0.36 -2.96 16 44 H 0.10 -0.66 7.67 -51.93 -0.40 -1.06 16 45 H 0.10 -0.67 7.65 -51.93 -0.40 -1.07 16 46 H 0.16 -1.10 6.30 -52.49 -0.33 -1.43 16 47 H 0.14 -0.83 4.86 -52.48 -0.25 -1.08 16 48 H 0.13 -0.47 7.96 -51.93 -0.41 -0.89 16 49 H 0.38 -1.97 8.70 45.56 0.40 -1.58 16 50 H 0.17 -0.02 7.61 -52.48 -0.40 -0.42 16 51 H 0.21 1.07 5.92 -52.49 -0.31 0.76 16 LS Contribution 438.09 15.07 6.60 6.60 Total: 0.00 -14.01 438.09 -8.06 -22.07 By element: Atomic # 1 Polarization: -7.74 SS G_CDS: -6.24 Total: -13.98 kcal Atomic # 6 Polarization: 4.78 SS G_CDS: -0.23 Total: 4.55 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: 0.45 Total: 0.53 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -2.20 Total: -6.44 kcal Atomic # 14 Polarization: -6.89 SS G_CDS: -6.45 Total: -13.34 kcal Total LS contribution 6.60 Total: 6.60 kcal Total: -14.01 -8.06 -22.07 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.419 kcal (2) G-P(sol) polarization free energy of solvation -14.010 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.591 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.062 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.072 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds