Wall clock time and date at job start Sun Mar 7 2021 10:41:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86303 * 109.47161 * 2 1 4 4 C 1.86299 * 109.47217 * 119.99499 * 2 1 3 5 5 C 1.86293 * 109.47364 * 239.99588 * 2 1 3 6 6 N 1.46505 * 109.46974 * 60.00146 * 5 2 1 7 7 C 1.35809 * 126.05363 * 90.00371 * 6 5 2 8 8 C 1.35753 * 107.56243 * 179.97438 * 7 6 5 9 9 N 1.40770 * 126.08077 * 179.97438 * 8 7 6 10 10 C 1.34779 * 119.99880 * 179.97438 * 9 8 7 11 11 O 1.21308 * 119.99988 * 359.97438 * 10 9 8 12 12 C 1.50700 * 119.99724 * 180.02562 * 10 9 8 13 13 F 1.39904 * 109.46969 * 299.99668 * 12 10 9 14 14 F 1.39897 * 109.47233 * 59.99827 * 12 10 9 15 15 O 1.42900 * 109.46872 * 179.97438 * 12 10 9 16 16 C 1.35904 * 116.99896 * 179.97438 * 15 12 10 17 17 C 1.38726 * 120.05579 * 359.73089 * 16 15 12 18 18 C 1.38147 * 119.94390 * 179.74335 * 17 16 15 19 19 C 1.38261 * 120.05479 * 0.50255 * 18 17 16 20 20 C 1.50700 * 119.94367 * 179.74577 * 19 18 17 21 21 O 1.42901 * 109.47316 * 245.02281 * 20 19 18 22 22 Si 1.86295 * 109.47300 * 5.02500 * 20 19 18 23 23 H 1.48493 * 109.46951 * 300.00061 * 22 20 19 24 24 H 1.48508 * 109.46972 * 59.99658 * 22 20 19 25 25 H 1.48498 * 109.47352 * 179.97438 * 22 20 19 26 26 C 1.38265 * 120.11041 * 359.77399 * 19 18 17 27 27 C 1.38141 * 120.05788 * 359.97089 * 26 19 18 28 28 C 1.40255 * 107.84084 * 359.97438 * 8 7 6 29 29 N 1.30830 * 108.33140 * 359.75546 * 28 8 7 30 30 H 1.09001 * 109.46570 * 60.00396 * 1 2 3 31 31 H 1.09001 * 109.47076 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.47204 * 300.00331 * 1 2 3 33 33 H 1.09000 * 109.47332 * 59.99747 * 3 2 1 34 34 H 1.09002 * 109.47176 * 179.97438 * 3 2 1 35 35 H 1.09004 * 109.46801 * 299.99758 * 3 2 1 36 36 H 1.09001 * 109.47058 * 60.00032 * 4 2 1 37 37 H 1.09002 * 109.47782 * 180.02562 * 4 2 1 38 38 H 1.09000 * 109.47172 * 300.00189 * 4 2 1 39 39 H 1.09002 * 109.47236 * 180.02562 * 5 2 1 40 40 H 1.08998 * 109.47688 * 299.99834 * 5 2 1 41 41 H 1.08002 * 126.22167 * 359.93915 * 7 6 5 42 42 H 0.96996 * 120.00001 * 0.02562 * 9 8 7 43 43 H 1.08000 * 120.02978 * 359.97438 * 17 16 15 44 44 H 1.08002 * 119.97055 * 180.23029 * 18 17 16 45 45 H 1.09010 * 109.46703 * 125.02821 * 20 19 18 46 46 H 0.96698 * 114.00035 * 180.02562 * 21 20 19 47 47 H 1.08000 * 119.97190 * 179.97438 * 26 19 18 48 48 H 1.08003 * 120.03042 * 179.97438 * 27 26 19 49 49 H 1.08000 * 125.83430 * 179.97438 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8781 1.5212 5 6 2.4841 -0.8783 -1.5210 6 7 1.9957 -0.1877 -2.7172 7 6 2.6259 0.8229 -3.3699 8 6 1.8455 1.1808 -4.4215 9 7 2.1293 2.1928 -5.3579 10 6 1.2637 2.4462 -6.3594 11 8 0.2402 1.8019 -6.4541 12 6 1.5678 3.5292 -7.3623 13 9 1.6885 4.7563 -6.7012 14 9 2.7672 3.2333 -8.0189 15 8 0.5081 3.6046 -8.3179 16 6 0.6270 4.5380 -9.2986 17 6 1.7380 5.3679 -9.3370 18 6 1.8590 6.3123 -10.3380 19 6 0.8691 6.4377 -11.2950 20 6 1.0010 7.4725 -12.3825 21 8 -0.0338 8.4478 -12.2401 22 14 2.6620 8.3055 -12.2490 23 1 2.7807 8.9631 -10.9229 24 1 3.7373 7.2920 -12.3970 25 1 2.7922 9.3249 -13.3210 26 6 -0.2419 5.6155 -11.2557 27 6 -0.3651 4.6661 -10.2598 28 6 0.7061 0.3630 -4.4090 29 7 0.7996 -0.4574 -3.3942 30 1 -0.3632 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5139 0.8899 33 1 2.1207 2.2704 0.8899 34 1 3.5740 1.7565 0.0005 35 1 2.1207 2.2703 -0.8901 36 1 2.1207 -1.9058 1.5213 37 1 3.5740 -0.8777 1.5215 38 1 2.1207 -0.3642 2.4111 39 1 3.5741 -0.8787 -1.5207 40 1 2.1208 -1.9060 -1.5210 41 1 3.5750 1.2625 -3.1010 42 1 2.9482 2.7072 -5.2829 43 1 2.5094 5.2733 -8.5871 44 1 2.7255 6.9561 -10.3704 45 1 0.9137 6.9897 -13.3560 46 1 -0.0107 9.1462 -12.9084 47 1 -1.0140 5.7157 -12.0041 48 1 -1.2334 4.0244 -10.2293 49 1 -0.1076 0.4015 -5.1181 RHF calculation, no. of doubly occupied orbitals= 71 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:41:56 Heat of formation + Delta-G solvation = -119.084243 kcal Electronic energy + Delta-G solvation = -34889.292886 eV Core-core repulsion = 29806.835607 eV Total energy + Delta-G solvation = -5082.457279 eV No. of doubly occupied orbitals = 71 Molecular weight (most abundant/longest-lived isotopes) = 399.138 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -50.80052 -48.77375 -42.48203 -41.26212 -40.69753 -39.10999 -37.31726 -36.26701 -33.83391 -32.43225 -32.02104 -30.90293 -29.76631 -28.97313 -28.59810 -28.48094 -27.03829 -26.12151 -24.52592 -23.31979 -22.54736 -22.24972 -21.57587 -20.35663 -19.67953 -19.59045 -18.54446 -18.46932 -17.95060 -17.16330 -16.93471 -16.72851 -16.52845 -16.33838 -16.10808 -15.77381 -15.63035 -15.41625 -15.25201 -15.22959 -15.01539 -14.80318 -14.54116 -14.44067 -14.36533 -14.34885 -14.20183 -14.18174 -14.01499 -13.92701 -13.65933 -13.61548 -13.45439 -13.30384 -13.21020 -13.01465 -12.47690 -12.43578 -12.21220 -11.96756 -11.80938 -11.76149 -11.54435 -11.39176 -11.08692 -10.98106 -10.38675 -10.16535 -10.07828 -9.45136 -8.84408 0.12944 0.25812 0.39401 0.45300 0.89919 1.10067 1.24158 1.39637 1.43372 1.46121 1.62688 1.77097 1.82942 1.86590 1.89528 2.11870 2.35857 2.52872 2.78410 3.31664 3.37137 3.53880 3.61529 3.73145 3.73704 3.88681 4.08279 4.15610 4.23168 4.34105 4.38068 4.42900 4.52315 4.54459 4.55852 4.57168 4.57757 4.58988 4.73017 4.75748 4.75972 4.87689 5.00790 5.14138 5.29259 5.36161 5.44475 5.46854 5.53319 5.69039 5.79128 5.88917 5.94610 6.42112 6.54498 6.68875 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.020 2.980 3 C -0.451 4.451 4 C -0.450 4.450 5 C -0.171 4.171 6 N -0.339 5.339 7 C 0.032 3.968 8 C -0.016 4.016 9 N -0.613 5.613 10 C 0.515 3.485 11 O -0.459 6.459 12 C 0.438 3.562 13 F -0.173 7.173 14 F -0.174 7.174 15 O -0.284 6.284 16 C 0.106 3.894 17 C -0.185 4.185 18 C -0.084 4.084 19 C -0.097 4.097 20 C -0.079 4.079 21 O -0.544 6.544 22 Si 0.942 3.058 23 H -0.247 1.247 24 H -0.248 1.248 25 H -0.255 1.255 26 C -0.052 4.052 27 C -0.125 4.125 28 C 0.051 3.949 29 N -0.276 5.276 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.070 0.930 33 H 0.075 0.925 34 H 0.070 0.930 35 H 0.070 0.930 36 H 0.073 0.927 37 H 0.071 0.929 38 H 0.076 0.924 39 H 0.101 0.899 40 H 0.107 0.893 41 H 0.181 0.819 42 H 0.418 0.582 43 H 0.136 0.864 44 H 0.128 0.872 45 H 0.079 0.921 46 H 0.381 0.619 47 H 0.140 0.860 48 H 0.142 0.858 49 H 0.206 0.794 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.071 1.304 1.666 5.495 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.214 2.786 3 C -0.559 4.559 4 C -0.558 4.558 5 C -0.337 4.337 6 N -0.121 5.121 7 C -0.117 4.117 8 C -0.120 4.120 9 N -0.260 5.260 10 C 0.293 3.707 11 O -0.329 6.329 12 C 0.360 3.640 13 F -0.155 7.155 14 F -0.155 7.155 15 O -0.200 6.200 16 C 0.063 3.937 17 C -0.204 4.204 18 C -0.101 4.101 19 C -0.098 4.098 20 C -0.189 4.189 21 O -0.350 6.350 22 Si 0.764 3.236 23 H -0.171 1.171 24 H -0.172 1.172 25 H -0.179 1.179 26 C -0.071 4.071 27 C -0.143 4.143 28 C -0.135 4.135 29 N -0.098 5.098 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.089 0.911 33 H 0.094 0.906 34 H 0.089 0.911 35 H 0.089 0.911 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.095 0.905 39 H 0.120 0.880 40 H 0.126 0.874 41 H 0.199 0.801 42 H 0.255 0.745 43 H 0.154 0.846 44 H 0.145 0.855 45 H 0.096 0.904 46 H 0.228 0.772 47 H 0.158 0.842 48 H 0.160 0.840 49 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 4.368 -0.301 2.885 5.243 hybrid contribution 1.082 1.315 -1.026 1.988 sum 5.450 1.015 1.859 5.847 Atomic orbital electron populations 1.26076 1.19988 1.04884 1.04579 0.79373 0.68126 0.67048 0.64027 1.26139 1.06185 1.18583 1.04976 1.26094 1.06409 1.08350 1.14957 1.27038 1.04658 1.05338 0.96651 1.48079 1.15623 1.26438 1.21958 1.21919 0.99943 0.95103 0.94708 1.17510 0.99423 0.98930 0.96111 1.42290 1.23296 1.35161 1.25279 1.19193 0.85199 0.84282 0.81988 1.90763 1.24291 1.46486 1.71335 1.21605 0.76413 0.81959 0.84073 1.93206 1.95429 1.45901 1.80933 1.93202 1.47253 1.93056 1.82001 1.86662 1.41636 1.54643 1.37052 1.18953 0.96056 0.89622 0.89050 1.21412 0.98362 0.98662 1.01929 1.20779 0.98623 0.97449 0.93286 1.19274 0.95919 0.97630 0.96941 1.24675 1.02651 0.92507 0.99069 1.86514 1.52049 1.39408 1.57041 0.85810 0.75716 0.80464 0.81583 1.17057 1.17203 1.17887 1.20867 0.96665 0.92489 0.97030 1.20523 0.98786 1.01046 0.93974 1.24455 0.98659 0.93071 0.97342 1.77518 1.01254 1.22818 1.08251 0.90997 0.90972 0.91131 0.90635 0.91057 0.91119 0.90817 0.90937 0.90509 0.88035 0.87412 0.80150 0.74517 0.84630 0.85452 0.90359 0.77170 0.84172 0.83981 0.77808 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.33 8.65 101.05 0.87 1.20 16 2 Si 1.02 -3.74 12.79 -169.99 -2.17 -5.92 16 3 C -0.45 1.30 8.65 101.05 0.87 2.17 16 4 C -0.45 1.52 8.65 101.05 0.87 2.39 16 5 C -0.17 0.47 5.59 59.85 0.33 0.80 16 6 N -0.34 -0.08 3.01 -9.17 -0.03 -0.10 16 7 C 0.03 -0.03 11.44 -16.68 -0.19 -0.22 16 8 C -0.02 -0.02 6.90 -83.88 -0.58 -0.60 16 9 N -0.61 0.19 5.47 -10.03 -0.05 0.13 16 10 C 0.51 1.13 7.31 -10.98 -0.08 1.05 16 11 O -0.46 -2.26 13.66 -14.37 -0.20 -2.45 16 12 C 0.44 0.86 2.05 36.01 0.07 0.93 16 13 F -0.17 -0.24 15.27 2.25 0.03 -0.20 16 14 F -0.17 -0.21 15.31 2.25 0.03 -0.18 16 15 O -0.28 -1.08 9.60 -39.35 -0.38 -1.46 16 16 C 0.11 0.34 6.48 -39.22 -0.25 0.09 16 17 C -0.19 -0.46 8.26 -39.43 -0.33 -0.78 16 18 C -0.08 -0.15 8.66 -39.61 -0.34 -0.50 16 19 C -0.10 -0.15 5.38 -104.60 -0.56 -0.72 16 20 C -0.08 0.04 2.79 36.01 0.10 0.14 16 21 O -0.54 -0.01 12.81 -35.23 -0.45 -0.46 16 22 Si 0.94 -0.63 25.14 -169.99 -4.27 -4.90 16 23 H -0.25 -0.18 7.04 56.52 0.40 0.22 16 24 H -0.25 0.02 7.11 56.52 0.40 0.42 16 25 H -0.25 0.16 7.11 56.52 0.40 0.56 16 26 C -0.05 -0.07 9.68 -39.61 -0.38 -0.45 16 27 C -0.12 -0.26 9.99 -39.43 -0.39 -0.65 16 28 C 0.05 0.17 10.84 -17.22 -0.19 -0.02 16 29 N -0.28 -0.90 12.56 30.70 0.39 -0.52 16 30 H 0.07 0.08 7.96 -51.93 -0.41 -0.33 16 31 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 32 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 33 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 34 H 0.07 -0.27 7.96 -51.93 -0.41 -0.68 16 35 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 36 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 37 H 0.07 -0.28 7.96 -51.93 -0.41 -0.69 16 38 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 39 H 0.10 -0.51 7.96 -51.93 -0.41 -0.92 16 40 H 0.11 -0.28 7.96 -51.93 -0.41 -0.70 16 41 H 0.18 -0.88 8.06 -52.49 -0.42 -1.30 16 42 H 0.42 -1.50 8.83 -40.82 -0.36 -1.87 16 43 H 0.14 0.19 5.10 -52.49 -0.27 -0.08 16 44 H 0.13 0.04 4.86 -52.49 -0.25 -0.22 16 45 H 0.08 -0.19 7.96 -51.92 -0.41 -0.60 16 46 H 0.38 -1.67 8.74 45.56 0.40 -1.27 16 47 H 0.14 -0.07 8.06 -52.49 -0.42 -0.49 16 48 H 0.14 0.09 8.06 -52.48 -0.42 -0.33 16 49 H 0.21 0.78 5.92 -52.49 -0.31 0.47 16 LS Contribution 421.39 15.07 6.35 6.35 Total: 0.00 -9.31 421.39 -6.74 -16.05 By element: Atomic # 1 Polarization: -5.36 SS G_CDS: -5.83 Total: -11.18 kcal Atomic # 6 Polarization: 5.01 SS G_CDS: -0.17 Total: 4.84 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: 0.30 Total: -0.49 kcal Atomic # 8 Polarization: -3.35 SS G_CDS: -1.03 Total: -4.37 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.07 Total: -0.38 kcal Atomic # 14 Polarization: -4.37 SS G_CDS: -6.45 Total: -10.82 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -9.31 -6.74 -16.05 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.033 kcal (2) G-P(sol) polarization free energy of solvation -9.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.743 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.051 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.084 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds