Wall clock time and date at job start Sun Mar 7 2021 10:41:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86303 * 109.47161 * 2 1 4 4 C 1.86299 * 109.47217 * 119.99499 * 2 1 3 5 5 C 1.86293 * 109.47364 * 239.99588 * 2 1 3 6 6 N 1.46505 * 109.46974 * 60.00146 * 5 2 1 7 7 C 1.35809 * 126.05363 * 90.00371 * 6 5 2 8 8 C 1.35753 * 107.56243 * 179.97438 * 7 6 5 9 9 N 1.40770 * 126.08077 * 179.97438 * 8 7 6 10 10 C 1.34779 * 119.99880 * 179.97438 * 9 8 7 11 11 O 1.21308 * 119.99988 * 359.97438 * 10 9 8 12 12 C 1.50700 * 119.99724 * 180.02562 * 10 9 8 13 13 F 1.39904 * 109.46969 * 299.99668 * 12 10 9 14 14 F 1.39897 * 109.47233 * 59.99827 * 12 10 9 15 15 O 1.42900 * 109.46872 * 179.97438 * 12 10 9 16 16 C 1.35904 * 116.99896 * 179.97438 * 15 12 10 17 17 C 1.38726 * 120.05579 * 359.73089 * 16 15 12 18 18 C 1.38147 * 119.94390 * 179.74335 * 17 16 15 19 19 C 1.38261 * 120.05479 * 0.50255 * 18 17 16 20 20 C 1.50700 * 119.94367 * 179.74577 * 19 18 17 21 21 O 1.42901 * 109.47316 * 245.02281 * 20 19 18 22 22 Si 1.86295 * 109.47300 * 5.02500 * 20 19 18 23 23 H 1.48493 * 109.46951 * 300.00061 * 22 20 19 24 24 H 1.48508 * 109.46972 * 59.99658 * 22 20 19 25 25 H 1.48498 * 109.47352 * 179.97438 * 22 20 19 26 26 C 1.38265 * 120.11041 * 359.77399 * 19 18 17 27 27 C 1.38141 * 120.05788 * 359.97089 * 26 19 18 28 28 C 1.40255 * 107.84084 * 359.97438 * 8 7 6 29 29 N 1.30830 * 108.33140 * 359.75546 * 28 8 7 30 30 H 1.09001 * 109.46570 * 60.00396 * 1 2 3 31 31 H 1.09001 * 109.47076 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.47204 * 300.00331 * 1 2 3 33 33 H 1.09000 * 109.47332 * 59.99747 * 3 2 1 34 34 H 1.09002 * 109.47176 * 179.97438 * 3 2 1 35 35 H 1.09004 * 109.46801 * 299.99758 * 3 2 1 36 36 H 1.09001 * 109.47058 * 60.00032 * 4 2 1 37 37 H 1.09002 * 109.47782 * 180.02562 * 4 2 1 38 38 H 1.09000 * 109.47172 * 300.00189 * 4 2 1 39 39 H 1.09002 * 109.47236 * 180.02562 * 5 2 1 40 40 H 1.08998 * 109.47688 * 299.99834 * 5 2 1 41 41 H 1.08002 * 126.22167 * 359.93915 * 7 6 5 42 42 H 0.96996 * 120.00001 * 0.02562 * 9 8 7 43 43 H 1.08000 * 120.02978 * 359.97438 * 17 16 15 44 44 H 1.08002 * 119.97055 * 180.23029 * 18 17 16 45 45 H 1.09010 * 109.46703 * 125.02821 * 20 19 18 46 46 H 0.96698 * 114.00035 * 180.02562 * 21 20 19 47 47 H 1.08000 * 119.97190 * 179.97438 * 26 19 18 48 48 H 1.08003 * 120.03042 * 179.97438 * 27 26 19 49 49 H 1.08000 * 125.83430 * 179.97438 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8781 1.5212 5 6 2.4841 -0.8783 -1.5210 6 7 1.9957 -0.1877 -2.7172 7 6 2.6259 0.8229 -3.3699 8 6 1.8455 1.1808 -4.4215 9 7 2.1293 2.1928 -5.3579 10 6 1.2637 2.4462 -6.3594 11 8 0.2402 1.8019 -6.4541 12 6 1.5678 3.5292 -7.3623 13 9 1.6885 4.7563 -6.7012 14 9 2.7672 3.2333 -8.0189 15 8 0.5081 3.6046 -8.3179 16 6 0.6270 4.5380 -9.2986 17 6 1.7380 5.3679 -9.3370 18 6 1.8590 6.3123 -10.3380 19 6 0.8691 6.4377 -11.2950 20 6 1.0010 7.4725 -12.3825 21 8 -0.0338 8.4478 -12.2401 22 14 2.6620 8.3055 -12.2490 23 1 2.7807 8.9631 -10.9229 24 1 3.7373 7.2920 -12.3970 25 1 2.7922 9.3249 -13.3210 26 6 -0.2419 5.6155 -11.2557 27 6 -0.3651 4.6661 -10.2598 28 6 0.7061 0.3630 -4.4090 29 7 0.7996 -0.4574 -3.3942 30 1 -0.3632 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5139 0.8899 33 1 2.1207 2.2704 0.8899 34 1 3.5740 1.7565 0.0005 35 1 2.1207 2.2703 -0.8901 36 1 2.1207 -1.9058 1.5213 37 1 3.5740 -0.8777 1.5215 38 1 2.1207 -0.3642 2.4111 39 1 3.5741 -0.8787 -1.5207 40 1 2.1208 -1.9060 -1.5210 41 1 3.5750 1.2625 -3.1010 42 1 2.9482 2.7072 -5.2829 43 1 2.5094 5.2733 -8.5871 44 1 2.7255 6.9561 -10.3704 45 1 0.9137 6.9897 -13.3560 46 1 -0.0107 9.1462 -12.9084 47 1 -1.0140 5.7157 -12.0041 48 1 -1.2334 4.0244 -10.2293 49 1 -0.1076 0.4015 -5.1181 RHF calculation, no. of doubly occupied orbitals= 71 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608520_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:41:55 Heat of formation + Delta-G solvation = -115.756992 kcal Electronic energy + Delta-G solvation = -34889.148606 eV Core-core repulsion = 29806.835607 eV Total energy + Delta-G solvation = -5082.312999 eV No. of doubly occupied orbitals = 71 Molecular weight (most abundant/longest-lived isotopes) = 399.138 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -50.93586 -48.90147 -42.53586 -41.39598 -40.82717 -39.20790 -37.30123 -36.37065 -33.82986 -32.52262 -32.11798 -30.95893 -29.57347 -28.99460 -28.37704 -28.31972 -26.99228 -26.15523 -24.63667 -23.42535 -22.59314 -22.28506 -21.69106 -20.48521 -19.77852 -19.73493 -18.52056 -18.43561 -18.05051 -17.25620 -16.97515 -16.77568 -16.56575 -16.37396 -16.20123 -15.84285 -15.75828 -15.48650 -15.38782 -15.28320 -15.14613 -14.88997 -14.52714 -14.43509 -14.28999 -14.22098 -14.15484 -14.07750 -13.94505 -13.83129 -13.68396 -13.43819 -13.21187 -13.15100 -13.12723 -13.02087 -12.53499 -12.46057 -12.21478 -11.95463 -11.86805 -11.77627 -11.56392 -11.50905 -10.85071 -10.80780 -10.31902 -10.19051 -10.13244 -9.57462 -8.86866 0.00581 0.14260 0.32269 0.34402 0.85789 1.16558 1.33664 1.45907 1.51017 1.62694 1.65448 1.78182 1.87140 1.91130 1.95988 2.11285 2.43161 2.57008 2.75125 3.19126 3.41219 3.52745 3.63386 3.65942 3.87259 3.91943 4.06765 4.16140 4.19567 4.34969 4.38811 4.54474 4.61002 4.66968 4.71079 4.72092 4.75005 4.81142 4.82829 4.84080 4.87454 4.88636 4.90308 5.02623 5.34326 5.37989 5.51314 5.54817 5.60987 5.66483 5.80166 5.83932 5.96010 6.39368 6.62721 6.84046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.477 4.477 2 Si 1.096 2.904 3 C -0.461 4.461 4 C -0.456 4.456 5 C -0.191 4.191 6 N -0.335 5.335 7 C 0.055 3.945 8 C -0.038 4.038 9 N -0.593 5.593 10 C 0.511 3.489 11 O -0.495 6.495 12 C 0.443 3.557 13 F -0.170 7.170 14 F -0.169 7.169 15 O -0.301 6.301 16 C 0.085 3.915 17 C -0.193 4.193 18 C -0.094 4.094 19 C -0.106 4.106 20 C -0.077 4.077 21 O -0.562 6.562 22 Si 0.970 3.030 23 H -0.271 1.271 24 H -0.257 1.257 25 H -0.252 1.252 26 C -0.055 4.055 27 C -0.133 4.133 28 C 0.029 3.971 29 N -0.312 5.312 30 H 0.047 0.953 31 H 0.063 0.937 32 H 0.068 0.932 33 H 0.070 0.930 34 H 0.089 0.911 35 H 0.061 0.939 36 H 0.072 0.928 37 H 0.085 0.915 38 H 0.073 0.927 39 H 0.137 0.863 40 H 0.106 0.894 41 H 0.229 0.771 42 H 0.435 0.565 43 H 0.142 0.858 44 H 0.139 0.861 45 H 0.102 0.898 46 H 0.399 0.601 47 H 0.159 0.841 48 H 0.150 0.850 49 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.440 1.895 1.963 7.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.581 4.581 2 Si 1.285 2.715 3 C -0.568 4.568 4 C -0.565 4.565 5 C -0.354 4.354 6 N -0.117 5.117 7 C -0.095 4.095 8 C -0.142 4.142 9 N -0.241 5.241 10 C 0.290 3.710 11 O -0.368 6.368 12 C 0.365 3.635 13 F -0.151 7.151 14 F -0.150 7.150 15 O -0.218 6.218 16 C 0.042 3.958 17 C -0.212 4.212 18 C -0.112 4.112 19 C -0.107 4.107 20 C -0.188 4.188 21 O -0.371 6.371 22 Si 0.794 3.206 23 H -0.195 1.195 24 H -0.181 1.181 25 H -0.176 1.176 26 C -0.072 4.072 27 C -0.152 4.152 28 C -0.156 4.156 29 N -0.135 5.135 30 H 0.066 0.934 31 H 0.082 0.918 32 H 0.087 0.913 33 H 0.089 0.911 34 H 0.108 0.892 35 H 0.080 0.920 36 H 0.091 0.909 37 H 0.104 0.896 38 H 0.092 0.908 39 H 0.155 0.845 40 H 0.125 0.875 41 H 0.245 0.755 42 H 0.275 0.725 43 H 0.159 0.841 44 H 0.156 0.844 45 H 0.120 0.880 46 H 0.250 0.750 47 H 0.176 0.824 48 H 0.168 0.832 49 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 6.725 0.307 3.174 7.442 hybrid contribution 0.340 1.132 -1.039 1.574 sum 7.065 1.439 2.134 7.519 Atomic orbital electron populations 1.26526 1.24415 1.03890 1.03239 0.78242 0.63965 0.66148 0.63152 1.26248 1.07527 1.18690 1.04377 1.26152 1.07355 1.08262 1.14684 1.27451 1.06948 1.05305 0.95698 1.48389 1.14664 1.26486 1.22127 1.22629 1.00506 0.93561 0.92850 1.17645 0.99524 0.99611 0.97429 1.42139 1.23280 1.34590 1.24082 1.19300 0.85152 0.84127 0.82406 1.90755 1.25852 1.47826 1.72333 1.21482 0.76283 0.81952 0.83798 1.93207 1.95401 1.45701 1.80818 1.93205 1.46860 1.93035 1.81937 1.86637 1.42527 1.55083 1.37552 1.19210 0.96914 0.90152 0.89523 1.21546 0.98397 0.98818 1.02414 1.21006 0.99311 0.97520 0.93321 1.19624 0.95706 0.98039 0.97292 1.24694 1.02502 0.92196 0.99358 1.86463 1.52145 1.40193 1.58332 0.85411 0.75227 0.79741 0.80174 1.19550 1.18147 1.17550 1.21116 0.97087 0.91973 0.97068 1.20759 0.98917 1.01461 0.94040 1.24322 0.99428 0.94317 0.97561 1.77452 1.03284 1.23794 1.09018 0.93413 0.91823 0.91323 0.91060 0.89183 0.91984 0.90905 0.89585 0.90806 0.84520 0.87521 0.75510 0.72499 0.84077 0.84390 0.88006 0.75015 0.82384 0.83242 0.79670 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.48 -0.13 8.65 113.37 0.98 0.85 16 2 Si 1.10 -9.02 12.79 68.60 0.88 -8.14 16 3 C -0.46 3.42 8.65 113.37 0.98 4.40 16 4 C -0.46 3.80 8.65 113.37 0.98 4.78 16 5 C -0.19 1.35 5.59 127.77 0.71 2.06 16 6 N -0.34 0.02 3.01 -182.93 -0.55 -0.53 16 7 C 0.05 -0.19 11.44 83.50 0.96 0.77 16 8 C -0.04 -0.10 6.90 37.62 0.26 0.16 16 9 N -0.59 0.11 5.47 -304.03 -1.66 -1.56 16 10 C 0.51 3.13 7.31 87.66 0.64 3.77 16 11 O -0.49 -6.35 13.66 15.92 0.22 -6.14 16 12 C 0.44 2.34 2.05 71.24 0.15 2.48 16 13 F -0.17 -0.62 15.27 44.97 0.69 0.07 16 14 F -0.17 -0.55 15.31 44.97 0.69 0.14 16 15 O -0.30 -2.91 9.60 -73.44 -0.71 -3.61 16 16 C 0.08 0.68 6.48 22.50 0.15 0.82 16 17 C -0.19 -1.15 8.26 22.36 0.18 -0.97 16 18 C -0.09 -0.40 8.66 22.25 0.19 -0.20 16 19 C -0.11 -0.33 5.38 -19.85 -0.11 -0.44 16 20 C -0.08 0.14 2.79 71.24 0.20 0.34 16 21 O -0.56 0.48 12.81 -148.98 -1.91 -1.42 16 22 Si 0.97 -1.70 25.14 68.60 1.72 0.02 16 23 H -0.27 -0.53 7.04 99.48 0.70 0.17 16 24 H -0.26 0.11 7.11 99.48 0.71 0.82 16 25 H -0.25 0.59 7.11 99.48 0.71 1.30 16 26 C -0.05 -0.15 9.68 22.25 0.22 0.06 16 27 C -0.13 -0.71 9.99 22.36 0.22 -0.48 16 28 C 0.03 0.26 10.84 85.33 0.92 1.18 16 29 N -0.31 -2.59 12.56 -56.77 -0.71 -3.30 16 30 H 0.05 0.24 7.96 -2.39 -0.02 0.22 16 31 H 0.06 0.08 7.96 -2.39 -0.02 0.06 16 32 H 0.07 -0.01 7.96 -2.39 -0.02 -0.03 16 33 H 0.07 -0.43 7.96 -2.39 -0.02 -0.45 16 34 H 0.09 -0.97 7.96 -2.39 -0.02 -0.99 16 35 H 0.06 -0.31 7.96 -2.38 -0.02 -0.33 16 36 H 0.07 -0.56 7.96 -2.39 -0.02 -0.58 16 37 H 0.09 -0.90 7.96 -2.39 -0.02 -0.92 16 38 H 0.07 -0.52 7.96 -2.39 -0.02 -0.54 16 39 H 0.14 -1.88 7.96 -2.39 -0.02 -1.90 16 40 H 0.11 -0.65 7.96 -2.39 -0.02 -0.67 16 41 H 0.23 -3.14 8.06 -2.91 -0.02 -3.17 16 42 H 0.44 -3.44 8.83 -92.71 -0.82 -4.26 16 43 H 0.14 0.52 5.10 -2.91 -0.01 0.51 16 44 H 0.14 0.15 4.86 -2.91 -0.01 0.13 16 45 H 0.10 -0.66 7.96 -2.38 -0.02 -0.68 16 46 H 0.40 -3.97 8.74 -74.06 -0.65 -4.62 16 47 H 0.16 -0.24 8.06 -2.91 -0.02 -0.26 16 48 H 0.15 0.41 8.06 -2.91 -0.02 0.38 16 49 H 0.19 2.21 5.92 -2.91 -0.02 2.19 16 Total: 0.00 -25.11 421.39 6.59 -18.52 By element: Atomic # 1 Polarization: -13.92 SS G_CDS: 0.30 Total: -13.61 kcal Atomic # 6 Polarization: 11.94 SS G_CDS: 7.64 Total: 19.57 kcal Atomic # 7 Polarization: -2.47 SS G_CDS: -2.93 Total: -5.39 kcal Atomic # 8 Polarization: -8.78 SS G_CDS: -2.40 Total: -11.17 kcal Atomic # 9 Polarization: -1.17 SS G_CDS: 1.38 Total: 0.21 kcal Atomic # 14 Polarization: -10.72 SS G_CDS: 2.60 Total: -8.12 kcal Total: -25.11 6.59 -18.52 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.239 kcal (2) G-P(sol) polarization free energy of solvation -25.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.351 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.518 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.757 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds