Wall clock time and date at job start Sun Mar 7 2021 10:42:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86297 * 109.47454 * 2 1 4 4 C 1.86303 * 109.46961 * 240.00100 * 2 1 3 5 5 C 1.86297 * 109.46969 * 120.00523 * 2 1 3 6 6 N 1.46495 * 109.47457 * 59.99555 * 5 2 1 7 7 C 1.35814 * 126.05052 * 90.00098 * 6 5 2 8 8 C 1.35755 * 107.56144 * 179.97438 * 7 6 5 9 9 N 1.40765 * 126.08137 * 179.97438 * 8 7 6 10 10 C 1.34777 * 119.99854 * 179.97438 * 9 8 7 11 11 O 1.21303 * 120.00450 * 0.02562 * 10 9 8 12 12 C 1.50700 * 119.99675 * 179.72930 * 10 9 8 13 13 O 1.42899 * 109.47143 * 180.27800 * 12 10 9 14 14 C 1.35901 * 116.99988 * 179.97438 * 13 12 10 15 15 C 1.38708 * 120.05836 * 359.72927 * 14 13 12 16 16 C 1.38168 * 119.94815 * 179.71944 * 15 14 13 17 17 C 1.38245 * 120.05134 * 0.56982 * 16 15 14 18 18 C 1.38294 * 120.11364 * 359.68684 * 17 16 15 19 19 C 1.50694 * 119.97212 * 180.02562 * 18 17 16 20 20 O 1.42904 * 109.46797 * 245.01527 * 19 18 17 21 21 Si 1.86292 * 109.47525 * 5.01421 * 19 18 17 22 22 H 1.48503 * 109.47004 * 60.00133 * 21 19 18 23 23 H 1.48500 * 109.47507 * 180.02562 * 21 19 18 24 24 H 1.48504 * 109.47303 * 300.00657 * 21 19 18 25 25 C 1.38126 * 120.05256 * 0.03295 * 18 17 16 26 26 C 1.40256 * 107.84136 * 0.24533 * 8 7 6 27 27 N 1.30835 * 108.33208 * 359.58580 * 26 8 7 28 28 H 1.08999 * 109.46642 * 300.00296 * 1 2 3 29 29 H 1.09010 * 109.47046 * 59.99510 * 1 2 3 30 30 H 1.08991 * 109.47653 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47470 * 179.97438 * 3 2 1 32 32 H 1.08997 * 109.47080 * 300.00228 * 3 2 1 33 33 H 1.09003 * 109.46763 * 59.99942 * 3 2 1 34 34 H 1.09001 * 109.47181 * 300.00541 * 4 2 1 35 35 H 1.08997 * 109.47119 * 60.00049 * 4 2 1 36 36 H 1.08998 * 109.47103 * 179.97438 * 4 2 1 37 37 H 1.09007 * 109.46642 * 299.99417 * 5 2 1 38 38 H 1.09003 * 109.47160 * 180.02562 * 5 2 1 39 39 H 1.07992 * 126.22132 * 359.97438 * 7 6 5 40 40 H 0.97001 * 119.99661 * 0.02562 * 9 8 7 41 41 H 1.09009 * 109.47352 * 300.27556 * 12 10 9 42 42 H 1.08998 * 109.47585 * 60.27844 * 12 10 9 43 43 H 1.08004 * 120.02837 * 359.97438 * 15 14 13 44 44 H 1.07998 * 119.97383 * 180.27704 * 16 15 14 45 45 H 1.08002 * 119.94663 * 179.70213 * 17 16 15 46 46 H 1.09005 * 109.47228 * 125.02280 * 19 18 17 47 47 H 0.96696 * 113.99848 * 60.00148 * 20 19 18 48 48 H 1.08001 * 120.02638 * 180.02562 * 25 18 17 49 49 H 1.07995 * 125.83761 * 179.76181 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4840 -0.8784 1.5210 6 7 1.9956 -2.2595 1.5210 7 6 2.6257 -3.3301 0.9720 8 6 1.8452 -4.4197 1.1877 9 7 2.1289 -5.7366 0.7794 10 6 1.2633 -6.7306 1.0607 11 8 0.2394 -6.4904 1.6652 12 6 1.5641 -8.1394 0.6182 13 8 0.5017 -9.0038 1.0257 14 6 0.6174 -10.3186 0.7020 15 6 1.7278 -10.7666 0.0017 16 6 1.8460 -12.1048 -0.3212 17 6 0.8530 -12.9951 0.0429 18 6 -0.2576 -12.5501 0.7365 19 6 -1.3379 -13.5235 1.1322 20 8 -2.5474 -13.1982 0.4442 21 14 -0.8120 -15.2525 0.6802 22 1 0.4449 -15.5905 1.3952 23 1 -1.8768 -16.2116 1.0696 24 1 -0.5850 -15.3337 -0.7852 25 6 -0.3776 -11.2143 1.0666 26 6 0.7029 -3.9990 1.8844 27 7 0.7964 -2.7099 2.0877 28 1 -0.3632 0.5139 0.8900 29 1 -0.3634 0.5140 -0.8900 30 1 -0.3634 -1.0275 -0.0005 31 1 3.5741 1.7564 0.0005 32 1 2.1208 2.2702 -0.8899 33 1 2.1207 2.2702 0.8900 34 1 2.1205 -1.9059 -1.5213 35 1 2.1206 -0.3644 -2.4111 36 1 3.5739 -0.8778 -1.5214 37 1 2.1206 -0.3645 2.4111 38 1 3.5740 -0.8780 1.5213 39 1 3.5750 -3.3169 0.4573 40 1 2.9478 -5.9288 0.2963 41 1 1.6588 -8.1670 -0.4674 42 1 2.4974 -8.4716 1.0729 43 1 2.5014 -10.0706 -0.2874 44 1 2.7125 -12.4548 -0.8625 45 1 0.9448 -14.0399 -0.2146 46 1 -1.5045 -13.4638 2.2078 47 1 -2.4728 -13.2310 -0.5193 48 1 -1.2449 -10.8673 1.6087 49 1 -0.1130 -4.6314 2.2015 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:42:33 Heat of formation + Delta-G solvation = -28.282164 kcal Electronic energy + Delta-G solvation = -28947.196089 eV Core-core repulsion = 24807.584235 eV Total energy + Delta-G solvation = -4139.611854 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.157 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.31357 -41.45209 -40.36851 -38.93372 -37.22444 -35.88372 -33.71610 -32.50446 -31.83552 -30.69546 -29.74405 -29.12498 -28.58049 -28.44930 -26.99531 -26.59707 -23.72476 -23.34244 -22.42379 -21.88530 -21.01670 -19.32764 -18.62708 -18.28262 -17.61563 -17.53584 -17.25958 -16.95982 -16.54122 -16.42160 -16.15616 -15.61244 -15.44010 -15.14785 -14.98598 -14.89684 -14.46308 -14.37927 -14.32978 -14.13757 -14.03012 -13.96370 -13.79712 -13.56246 -13.54413 -13.42983 -13.26592 -13.18225 -13.03360 -12.57371 -12.30516 -12.18498 -12.10038 -11.96398 -11.66824 -11.54821 -11.38032 -11.05811 -10.94969 -10.85373 -10.46534 -10.03535 -9.94546 -9.28755 -8.62403 0.18120 0.38119 0.71229 1.09758 1.17676 1.30585 1.43122 1.51229 1.52223 1.54365 1.66856 1.90413 1.94426 2.13509 2.39702 2.54300 2.64921 3.38569 3.48065 3.63340 3.66472 3.72136 3.84100 3.84558 3.86225 3.97526 4.15279 4.24970 4.34928 4.46683 4.53069 4.54493 4.56792 4.59338 4.60527 4.62199 4.66407 4.72586 4.76093 4.79525 4.95369 5.10225 5.21113 5.31061 5.32682 5.38034 5.41436 5.56749 5.62503 5.89613 6.00272 6.21545 6.34583 6.55636 6.79048 7.06463 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.019 2.981 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.169 4.169 6 N -0.343 5.343 7 C 0.017 3.983 8 C -0.006 4.006 9 N -0.639 5.639 10 C 0.516 3.484 11 O -0.500 6.500 12 C 0.045 3.955 13 O -0.287 6.287 14 C 0.129 3.871 15 C -0.206 4.206 16 C -0.072 4.072 17 C -0.162 4.162 18 C -0.080 4.080 19 C -0.083 4.083 20 O -0.536 6.536 21 Si 0.955 3.045 22 H -0.250 1.250 23 H -0.254 1.254 24 H -0.252 1.252 25 C -0.117 4.117 26 C 0.048 3.952 27 N -0.280 5.280 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.075 0.925 33 H 0.072 0.928 34 H 0.070 0.930 35 H 0.074 0.926 36 H 0.070 0.930 37 H 0.105 0.895 38 H 0.099 0.901 39 H 0.177 0.823 40 H 0.411 0.589 41 H 0.097 0.903 42 H 0.097 0.903 43 H 0.130 0.870 44 H 0.130 0.870 45 H 0.123 0.877 46 H 0.121 0.879 47 H 0.377 0.623 48 H 0.138 0.862 49 H 0.205 0.795 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.616 0.714 -4.653 8.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.213 2.787 3 C -0.558 4.558 4 C -0.558 4.558 5 C -0.335 4.335 6 N -0.126 5.126 7 C -0.131 4.131 8 C -0.110 4.110 9 N -0.286 5.286 10 C 0.301 3.699 11 O -0.373 6.373 12 C -0.034 4.034 13 O -0.199 6.199 14 C 0.084 3.916 15 C -0.225 4.225 16 C -0.090 4.090 17 C -0.180 4.180 18 C -0.080 4.080 19 C -0.194 4.194 20 O -0.341 6.341 21 Si 0.778 3.222 22 H -0.174 1.174 23 H -0.178 1.178 24 H -0.176 1.176 25 C -0.135 4.135 26 C -0.139 4.139 27 N -0.103 5.103 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.094 0.906 33 H 0.092 0.908 34 H 0.089 0.911 35 H 0.093 0.907 36 H 0.089 0.911 37 H 0.124 0.876 38 H 0.117 0.883 39 H 0.194 0.806 40 H 0.246 0.754 41 H 0.115 0.885 42 H 0.115 0.885 43 H 0.148 0.852 44 H 0.148 0.852 45 H 0.141 0.859 46 H 0.138 0.862 47 H 0.224 0.776 48 H 0.156 0.844 49 H 0.221 0.779 Dipole moment (debyes) X Y Z Total from point charges 6.247 1.305 -3.151 7.117 hybrid contribution 1.457 -0.416 -1.094 1.869 sum 7.705 0.889 -4.245 8.841 Atomic orbital electron populations 1.26074 1.20031 1.04940 1.04444 0.79383 0.68133 0.66413 0.64755 1.26095 1.06374 1.18216 1.05119 1.26125 1.06113 1.08283 1.15238 1.26967 1.04455 0.83187 1.18890 1.47998 1.15657 1.06402 1.42538 1.21859 1.00164 0.86465 1.04642 1.17595 0.98701 0.84390 1.10304 1.42486 1.23984 1.04641 1.57508 1.20012 0.83760 0.85849 0.80241 1.90678 1.25221 1.82878 1.38494 1.22360 0.91474 0.88060 1.01469 1.86168 1.43352 1.15484 1.74885 1.19034 0.94650 0.82849 0.95056 1.21291 0.98943 0.97573 1.04686 1.20881 0.98281 0.92281 0.97592 1.20997 0.95195 0.99931 1.01923 1.20127 0.95881 0.94333 0.97708 1.25057 0.86247 1.06593 1.01467 1.86545 1.31418 1.92828 1.23283 0.85605 0.80316 0.75220 0.81058 1.17361 1.17785 1.17558 1.20282 0.98918 0.91118 1.03200 1.24493 0.98898 0.91816 0.98657 1.77485 1.01148 1.12232 1.19450 0.91004 0.91208 0.90986 0.90970 0.90550 0.90840 0.91123 0.90719 0.91118 0.87637 0.88268 0.80611 0.75383 0.88500 0.88521 0.85202 0.85188 0.85940 0.86169 0.77614 0.84365 0.77880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.10 8.65 101.05 0.87 0.97 16 2 Si 1.02 -3.26 12.79 -169.99 -2.17 -5.44 16 3 C -0.45 1.36 8.65 101.05 0.87 2.24 16 4 C -0.45 1.16 8.65 101.05 0.87 2.04 16 5 C -0.17 0.35 5.59 59.84 0.33 0.69 16 6 N -0.34 -0.33 3.01 -9.17 -0.03 -0.35 16 7 C 0.02 -0.01 11.44 -16.68 -0.19 -0.20 16 8 C -0.01 -0.01 6.90 -83.88 -0.58 -0.59 16 9 N -0.64 0.70 5.47 -10.03 -0.05 0.65 16 10 C 0.52 0.64 7.88 -10.98 -0.09 0.56 16 11 O -0.50 -2.88 13.66 -14.37 -0.20 -3.08 16 12 C 0.05 -0.06 5.22 36.01 0.19 0.12 16 13 O -0.29 -0.73 9.67 -39.34 -0.38 -1.11 16 14 C 0.13 0.21 6.69 -39.22 -0.26 -0.05 16 15 C -0.21 0.11 9.04 -39.43 -0.36 -0.25 16 16 C -0.07 0.05 10.04 -39.60 -0.40 -0.35 16 17 C -0.16 0.00 8.67 -39.56 -0.34 -0.35 16 18 C -0.08 -0.06 5.35 -104.65 -0.56 -0.62 16 19 C -0.08 0.01 2.80 36.00 0.10 0.11 16 20 O -0.54 -0.43 12.83 -35.23 -0.45 -0.88 16 21 Si 0.96 -0.63 25.14 -169.99 -4.27 -4.91 16 22 H -0.25 0.04 7.11 56.52 0.40 0.44 16 23 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 24 H -0.25 0.17 7.04 56.52 0.40 0.57 16 25 C -0.12 -0.24 9.62 -39.43 -0.38 -0.62 16 26 C 0.05 0.20 10.84 -17.22 -0.19 0.01 16 27 N -0.28 -1.18 12.56 30.70 0.39 -0.79 16 28 H 0.07 0.01 7.96 -51.93 -0.41 -0.41 16 29 H 0.07 -0.04 7.96 -51.92 -0.41 -0.46 16 30 H 0.07 0.13 7.96 -51.93 -0.41 -0.29 16 31 H 0.07 -0.25 7.96 -51.93 -0.41 -0.67 16 32 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 33 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 34 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 35 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.07 -0.25 7.96 -51.93 -0.41 -0.66 16 37 H 0.11 -0.20 7.96 -51.93 -0.41 -0.61 16 38 H 0.10 -0.43 7.96 -51.93 -0.41 -0.84 16 39 H 0.18 -0.76 8.06 -52.49 -0.42 -1.18 16 40 H 0.41 -2.15 8.83 -40.82 -0.36 -2.51 16 41 H 0.10 -0.40 7.65 -51.92 -0.40 -0.80 16 42 H 0.10 -0.40 7.68 -51.93 -0.40 -0.79 16 43 H 0.13 -0.44 6.30 -52.48 -0.33 -0.77 16 44 H 0.13 -0.38 8.06 -52.49 -0.42 -0.81 16 45 H 0.12 -0.15 4.86 -52.49 -0.25 -0.41 16 46 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 47 H 0.38 -0.95 8.70 45.56 0.40 -0.55 16 48 H 0.14 0.34 8.06 -52.49 -0.42 -0.09 16 49 H 0.20 1.08 5.92 -52.49 -0.31 0.77 16 LS Contribution 412.07 15.07 6.21 6.21 Total: 0.00 -10.98 412.07 -7.74 -18.72 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -6.69 Total: -12.74 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: -0.09 Total: 3.72 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: 0.30 Total: -0.50 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -1.03 Total: -5.06 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: -6.45 Total: -10.34 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -10.98 -7.74 -18.72 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.563 kcal (2) G-P(sol) polarization free energy of solvation -10.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.539 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.743 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.719 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.282 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds