Wall clock time and date at job start Sun Mar 7 2021 10:42:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35992 * 116.99565 * 2 1 4 4 C 1.38670 * 119.99783 * 0.02562 * 3 2 1 5 5 C 1.38154 * 119.99915 * 179.97438 * 4 3 2 6 6 C 1.38681 * 119.99691 * 0.02562 * 5 4 3 7 7 O 1.35986 * 119.99886 * 180.02562 * 6 5 4 8 8 C 1.42905 * 117.00016 * 0.02562 * 7 6 5 9 9 C 1.50700 * 109.47021 * 179.97438 * 8 7 6 10 10 O 1.21306 * 119.99782 * 0.02562 * 9 8 7 11 11 N 1.34778 * 119.99976 * 179.97438 * 9 8 7 12 12 C 1.40762 * 119.99649 * 180.02562 * 11 9 8 13 13 C 1.35758 * 126.07598 * 179.97438 * 12 11 9 14 14 N 1.35805 * 107.56427 * 179.97438 * 13 12 11 15 15 C 1.46504 * 126.05914 * 179.97438 * 14 13 12 16 16 Si 1.86296 * 109.46982 * 89.99826 * 15 14 13 17 17 C 1.86305 * 109.46706 * 60.00643 * 16 15 14 18 18 C 1.86299 * 109.47208 * 180.02562 * 16 15 14 19 19 C 1.86299 * 109.47658 * 300.00585 * 16 15 14 20 20 N 1.40078 * 107.89133 * 0.02562 * 14 13 12 21 21 C 1.30826 * 108.36573 * 359.71099 * 20 14 13 22 22 C 1.38712 * 120.00083 * 0.02562 * 6 5 4 23 23 C 1.50701 * 119.99957 * 179.97438 * 22 6 5 24 24 O 1.42895 * 109.47079 * 75.00898 * 23 22 6 25 25 Si 1.86301 * 109.47149 * 195.00393 * 23 22 6 26 26 H 1.48506 * 109.47302 * 59.99966 * 25 23 22 27 27 H 1.48503 * 109.47334 * 300.00099 * 25 23 22 28 28 H 1.48500 * 109.47376 * 180.02562 * 25 23 22 29 29 C 1.38110 * 119.99936 * 0.24058 * 22 6 5 30 30 H 1.08997 * 109.46779 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.46818 * 299.99390 * 1 2 3 32 32 H 1.08993 * 109.47435 * 59.99660 * 1 2 3 33 33 H 1.07996 * 120.00591 * 359.97438 * 4 3 2 34 34 H 1.08000 * 120.00545 * 179.97438 * 5 4 3 35 35 H 1.08999 * 109.47003 * 300.00171 * 8 7 6 36 36 H 1.09004 * 109.46705 * 60.00512 * 8 7 6 37 37 H 0.96998 * 119.99988 * 0.02562 * 11 9 8 38 38 H 1.07998 * 126.21820 * 359.97438 * 13 12 11 39 39 H 1.08992 * 109.47502 * 210.00599 * 15 14 13 40 40 H 1.09001 * 109.46709 * 330.00401 * 15 14 13 41 41 H 1.08999 * 109.47199 * 60.00334 * 17 16 15 42 42 H 1.09006 * 109.46870 * 179.97438 * 17 16 15 43 43 H 1.08997 * 109.47155 * 299.99840 * 17 16 15 44 44 H 1.09001 * 109.46724 * 60.00428 * 18 16 15 45 45 H 1.08997 * 109.47571 * 180.02562 * 18 16 15 46 46 H 1.09000 * 109.47560 * 300.00819 * 18 16 15 47 47 H 1.09002 * 109.46503 * 59.99879 * 19 16 15 48 48 H 1.08994 * 109.47040 * 179.97438 * 19 16 15 49 49 H 1.09001 * 109.47052 * 300.00049 * 19 16 15 50 50 H 1.08000 * 125.82726 * 180.26196 * 21 20 14 51 51 H 1.09001 * 109.47380 * 315.00295 * 23 22 6 52 52 H 0.96708 * 113.99763 * 299.99687 * 24 23 22 53 53 H 1.08008 * 119.99731 * 179.72155 * 29 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 1.2909 2.3746 0.0005 5 6 1.9180 3.6057 0.0011 6 6 3.3029 3.6783 0.0005 7 8 3.9202 4.8900 0.0016 8 6 3.0802 6.0461 0.0038 9 6 3.9343 7.2876 0.0053 10 8 5.1436 7.1918 0.0041 11 7 3.3546 8.5044 0.0070 12 6 4.1525 9.6640 0.0079 13 6 3.7017 10.9446 0.0090 14 7 4.7869 11.7611 0.0102 15 6 4.7639 13.2259 0.0111 16 14 4.7531 13.8456 1.7679 17 6 6.2835 13.2481 2.6465 18 6 4.7231 15.7084 1.7692 19 6 3.2416 13.2002 2.6451 20 7 5.9322 10.9546 0.0091 21 6 5.5544 9.7021 0.0136 22 6 4.0585 2.5150 -0.0011 23 6 5.5634 2.5940 -0.0022 24 8 6.0219 2.9658 1.2991 25 14 6.2721 0.9327 -0.4590 26 1 5.7957 0.5460 -1.8113 27 1 5.8305 -0.0829 0.5304 28 1 7.7551 1.0103 -0.4595 29 6 3.4315 1.2844 -0.0072 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5137 0.8900 32 1 -0.3634 0.5138 -0.8899 33 1 0.2125 2.3181 0.0005 34 1 1.3298 4.5114 0.0011 35 1 2.4502 6.0391 -0.8856 36 1 2.4517 6.0368 0.8944 37 1 2.3877 8.5809 0.0076 38 1 2.6679 11.2571 0.0091 39 1 5.6482 13.6036 -0.5020 40 1 3.8685 13.5755 -0.5029 41 1 7.1679 13.6258 2.1334 42 1 6.2774 13.6111 3.6743 43 1 6.3007 12.1583 2.6457 44 1 3.8275 16.0576 1.2553 45 1 4.7173 16.0710 2.7971 46 1 5.6072 16.0865 1.2559 47 1 3.2588 12.1103 2.6443 48 1 3.2356 13.5624 3.6730 49 1 2.3462 13.5498 2.1310 50 1 6.2102 8.8440 0.0181 51 1 5.8876 3.3394 -0.7285 52 1 5.6914 3.8225 1.6026 53 1 4.0199 0.3787 -0.0130 RHF calculation, no. of doubly occupied orbitals= 71 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608520_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:42:45 Heat of formation + Delta-G solvation = -63.539312 kcal Electronic energy + Delta-G solvation = -33882.853185 eV Core-core repulsion = 29267.492656 eV Total energy + Delta-G solvation = -4615.360530 eV No. of doubly occupied orbitals = 71 Molecular weight (most abundant/longest-lived isotopes) = 393.172 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.35120 -41.75063 -40.66338 -39.76273 -38.11381 -36.92752 -35.90960 -33.72025 -32.81693 -31.36288 -30.55205 -29.57643 -29.10561 -28.37818 -28.31509 -27.96945 -26.75415 -26.57275 -24.01276 -22.84715 -22.40034 -22.05252 -21.05654 -19.52882 -18.84680 -18.60642 -18.12493 -17.91782 -17.48518 -17.38315 -16.71647 -16.63682 -16.40907 -16.25511 -15.69555 -15.62910 -15.51205 -15.29079 -15.10565 -14.79378 -14.25767 -14.18925 -14.15548 -14.08779 -14.00534 -13.82553 -13.79963 -13.57648 -13.43610 -13.41167 -13.21098 -13.13648 -13.02002 -13.01386 -12.52616 -12.27824 -12.26251 -12.15828 -11.82494 -11.74713 -11.43172 -11.36689 -11.21639 -11.09059 -10.89907 -10.84663 -10.79847 -10.09172 -10.02628 -8.81427 -8.62441 0.06890 0.34305 0.75528 1.15930 1.23941 1.28908 1.45242 1.49254 1.60155 1.70601 1.88153 1.91404 2.07212 2.13339 2.34313 2.55606 2.58150 2.62195 3.49576 3.57290 3.73061 3.78444 3.89958 3.98197 4.02905 4.10435 4.14156 4.15753 4.23774 4.28511 4.35702 4.42602 4.44667 4.59127 4.68861 4.70468 4.71003 4.74239 4.75362 4.77166 4.83737 4.85041 4.87454 4.89212 4.99556 5.10090 5.13152 5.21212 5.42496 5.51315 5.61155 5.66136 5.76942 6.09660 6.16248 6.41393 6.47869 6.59562 6.70764 7.16326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.088 3.912 4 C -0.160 4.160 5 C -0.156 4.156 6 C 0.098 3.902 7 O -0.311 6.311 8 C 0.044 3.956 9 C 0.509 3.491 10 O -0.554 6.554 11 N -0.620 5.620 12 C -0.024 4.024 13 C 0.036 3.964 14 N -0.341 5.341 15 C -0.189 4.189 16 Si 1.095 2.905 17 C -0.477 4.477 18 C -0.456 4.456 19 C -0.457 4.457 20 N -0.322 5.322 21 C 0.021 3.979 22 C -0.116 4.116 23 C -0.087 4.087 24 O -0.550 6.550 25 Si 1.033 2.967 26 H -0.239 1.239 27 H -0.262 1.262 28 H -0.272 1.272 29 C -0.138 4.138 30 H 0.112 0.888 31 H 0.068 0.932 32 H 0.069 0.931 33 H 0.163 0.837 34 H 0.174 0.826 35 H 0.129 0.871 36 H 0.131 0.869 37 H 0.433 0.567 38 H 0.224 0.776 39 H 0.101 0.899 40 H 0.134 0.866 41 H 0.060 0.940 42 H 0.068 0.932 43 H 0.045 0.955 44 H 0.085 0.915 45 H 0.073 0.927 46 H 0.070 0.930 47 H 0.061 0.939 48 H 0.071 0.929 49 H 0.090 0.910 50 H 0.180 0.820 51 H 0.080 0.920 52 H 0.376 0.624 53 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.740 6.251 -0.844 15.119 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.254 6.254 3 C 0.043 3.957 4 C -0.179 4.179 5 C -0.174 4.174 6 C 0.053 3.947 7 O -0.225 6.225 8 C -0.034 4.034 9 C 0.297 3.703 10 O -0.431 6.431 11 N -0.269 5.269 12 C -0.128 4.128 13 C -0.114 4.114 14 N -0.123 5.123 15 C -0.353 4.353 16 Si 1.284 2.716 17 C -0.581 4.581 18 C -0.564 4.564 19 C -0.565 4.565 20 N -0.146 5.146 21 C -0.164 4.164 22 C -0.117 4.117 23 C -0.195 4.195 24 O -0.357 6.357 25 Si 0.854 3.146 26 H -0.162 1.162 27 H -0.186 1.186 28 H -0.197 1.197 29 C -0.157 4.157 30 H 0.131 0.869 31 H 0.086 0.914 32 H 0.088 0.912 33 H 0.180 0.820 34 H 0.191 0.809 35 H 0.147 0.853 36 H 0.148 0.852 37 H 0.272 0.728 38 H 0.240 0.760 39 H 0.119 0.881 40 H 0.152 0.848 41 H 0.080 0.920 42 H 0.087 0.913 43 H 0.065 0.935 44 H 0.105 0.895 45 H 0.092 0.908 46 H 0.090 0.910 47 H 0.081 0.919 48 H 0.090 0.910 49 H 0.109 0.891 50 H 0.197 0.803 51 H 0.098 0.902 52 H 0.225 0.775 53 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -10.961 5.547 -1.170 12.341 hybrid contribution -1.255 0.342 0.200 1.316 sum -12.216 5.890 -0.971 13.597 Atomic orbital electron populations 1.23357 0.76249 1.05551 1.02523 1.86082 1.23585 1.26717 1.89051 1.18987 0.91846 0.85451 0.99433 1.21414 1.01576 0.90849 1.04042 1.21427 0.92094 0.99989 1.03901 1.18674 0.91566 0.84099 1.00346 1.86082 1.35331 1.11707 1.89357 1.22635 0.92202 0.81254 1.07313 1.20607 0.88545 0.84905 0.76290 1.90678 1.16529 1.86721 1.49151 1.42328 1.10438 1.01776 1.72343 1.17725 0.90461 0.87117 1.17500 1.22577 0.95457 0.88028 1.05291 1.48296 1.02897 1.06517 1.54599 1.27386 1.08641 0.75707 1.23555 0.78259 0.65278 0.66016 0.62067 1.26540 1.17885 1.05028 1.08620 1.26152 1.05443 1.19637 1.05207 1.26195 1.15626 1.06100 1.08547 1.77407 1.09606 1.02172 1.25409 1.24303 0.95202 0.95012 1.01924 1.19403 0.96352 0.90729 1.05221 1.25246 0.92293 1.13268 0.88653 1.86638 1.74165 1.42602 1.32256 0.84238 0.78179 0.72535 0.79686 1.16243 1.18631 1.19737 1.20274 0.92875 0.97270 1.05265 0.86944 0.91366 0.91216 0.82003 0.80907 0.85327 0.85182 0.72778 0.75954 0.88077 0.84818 0.92038 0.91308 0.93534 0.89545 0.90767 0.91045 0.91936 0.91032 0.89132 0.80280 0.90218 0.77536 0.84911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.34 -1.42 10.50 -93.46 -0.98 -2.40 16 3 C 0.09 0.37 6.69 22.49 0.15 0.52 16 4 C -0.16 0.30 9.03 22.35 0.20 0.51 16 5 C -0.16 0.55 9.03 22.36 0.20 0.75 16 6 C 0.10 0.23 6.62 22.49 0.15 0.37 16 7 O -0.31 -0.76 8.56 -74.36 -0.64 -1.40 16 8 C 0.04 -0.28 5.22 71.24 0.37 0.09 16 9 C 0.51 0.41 7.88 87.66 0.69 1.10 16 10 O -0.55 -6.51 13.66 15.93 0.22 -6.30 16 11 N -0.62 2.76 5.47 -304.05 -1.66 1.10 16 12 C -0.02 -0.05 6.90 37.62 0.26 0.21 16 13 C 0.04 -0.12 11.44 83.50 0.96 0.83 16 14 N -0.34 -0.32 3.01 -182.93 -0.55 -0.87 16 15 C -0.19 1.13 5.59 127.77 0.71 1.84 16 16 Si 1.09 -8.37 12.79 68.60 0.88 -7.49 16 17 C -0.48 -0.57 8.65 113.37 0.98 0.41 16 18 C -0.46 3.61 8.65 113.37 0.98 4.59 16 19 C -0.46 3.46 8.65 113.37 0.98 4.44 16 20 N -0.32 -3.19 12.56 -56.78 -0.71 -3.90 16 21 C 0.02 0.21 10.84 85.33 0.92 1.13 16 22 C -0.12 -0.73 5.28 -19.78 -0.10 -0.84 16 23 C -0.09 -0.66 2.33 71.24 0.17 -0.49 16 24 O -0.55 -5.48 12.65 -148.98 -1.89 -7.37 16 25 Si 1.03 6.92 25.73 68.60 1.77 8.69 16 26 H -0.24 -1.17 7.11 99.48 0.71 -0.47 16 27 H -0.26 -2.11 6.74 99.48 0.67 -1.44 16 28 H -0.27 -2.46 7.11 99.48 0.71 -1.76 16 29 C -0.14 -0.94 8.59 22.35 0.19 -0.75 16 30 H 0.11 -0.82 8.14 -2.39 -0.02 -0.84 16 31 H 0.07 -0.50 7.66 -2.39 -0.02 -0.52 16 32 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 33 H 0.16 -1.29 6.29 -2.91 -0.02 -1.31 16 34 H 0.17 -2.10 6.29 -2.91 -0.02 -2.12 16 35 H 0.13 -1.67 7.66 -2.39 -0.02 -1.69 16 36 H 0.13 -1.72 7.66 -2.38 -0.02 -1.74 16 37 H 0.43 -6.19 8.83 -92.71 -0.82 -7.01 16 38 H 0.22 -3.09 8.06 -2.91 -0.02 -3.11 16 39 H 0.10 -0.46 7.96 -2.39 -0.02 -0.48 16 40 H 0.13 -1.70 7.96 -2.39 -0.02 -1.72 16 41 H 0.06 0.15 7.96 -2.39 -0.02 0.13 16 42 H 0.07 0.03 7.96 -2.38 -0.02 0.01 16 43 H 0.05 0.29 7.96 -2.39 -0.02 0.27 16 44 H 0.09 -0.88 7.96 -2.39 -0.02 -0.90 16 45 H 0.07 -0.51 7.96 -2.39 -0.02 -0.53 16 46 H 0.07 -0.50 7.96 -2.39 -0.02 -0.52 16 47 H 0.06 -0.33 7.96 -2.39 -0.02 -0.35 16 48 H 0.07 -0.45 7.96 -2.39 -0.02 -0.47 16 49 H 0.09 -1.01 7.96 -2.39 -0.02 -1.03 16 50 H 0.18 2.57 5.92 -2.91 -0.02 2.56 16 51 H 0.08 0.58 7.82 -2.39 -0.02 0.56 16 52 H 0.38 2.51 8.60 -74.05 -0.64 1.87 16 53 H 0.13 0.92 4.88 -2.91 -0.01 0.91 16 Total: 0.00 -31.99 440.17 5.57 -26.42 By element: Atomic # 1 Polarization: -22.43 SS G_CDS: 0.22 Total: -22.21 kcal Atomic # 6 Polarization: 6.81 SS G_CDS: 8.93 Total: 15.74 kcal Atomic # 7 Polarization: -0.75 SS G_CDS: -2.93 Total: -3.68 kcal Atomic # 8 Polarization: -14.18 SS G_CDS: -3.29 Total: -17.47 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: 2.64 Total: 1.20 kcal Total: -31.99 5.57 -26.42 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.119 kcal (2) G-P(sol) polarization free energy of solvation -31.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.421 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds