Wall clock time and date at job start Sun Mar 7 2021 10:47:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37632 * 125.67507 * 2 1 4 4 C 1.46662 * 126.22605 * 359.97438 * 3 2 1 5 5 O 1.21724 * 119.99973 * 4.67546 * 4 3 2 6 6 N 1.34783 * 120.00216 * 184.67422 * 4 3 2 7 7 C 1.40717 * 119.99758 * 174.75083 * 6 4 3 8 8 C 1.35768 * 126.07543 * 180.02562 * 7 6 4 9 9 N 1.35841 * 107.55793 * 179.97438 * 8 7 6 10 10 C 1.46493 * 126.05445 * 179.97438 * 9 8 7 11 11 Si 1.86298 * 109.46886 * 90.00618 * 10 9 8 12 12 C 1.86295 * 109.47566 * 59.99541 * 11 10 9 13 13 C 1.86303 * 109.47252 * 180.02562 * 11 10 9 14 14 C 1.86311 * 109.46994 * 299.99746 * 11 10 9 15 15 N 1.40070 * 107.88931 * 359.97438 * 9 8 7 16 16 C 1.30833 * 108.37236 * 359.97438 * 15 9 8 17 17 C 1.37895 * 107.54928 * 179.73336 * 3 2 1 18 18 C 1.39883 * 107.09268 * 0.26574 * 17 3 2 19 19 Br 1.89100 * 126.07204 * 179.97438 * 18 17 3 20 20 C 1.35492 * 107.85571 * 359.97438 * 18 17 3 21 21 C 1.50701 * 125.57324 * 180.02562 * 20 18 17 22 22 O 1.42901 * 109.47181 * 124.95597 * 21 20 18 23 23 Si 1.86300 * 109.46862 * 244.95529 * 21 20 18 24 24 H 1.48502 * 109.47140 * 294.94426 * 23 21 20 25 25 H 1.48500 * 109.47426 * 54.94259 * 23 21 20 26 26 H 1.48500 * 109.47220 * 174.94320 * 23 21 20 27 27 H 1.09003 * 109.46920 * 94.79702 * 1 2 3 28 28 H 1.09001 * 109.46825 * 214.79670 * 1 2 3 29 29 H 1.09000 * 109.47386 * 334.79584 * 1 2 3 30 30 H 0.97000 * 119.99714 * 354.76018 * 6 4 3 31 31 H 1.08000 * 126.22343 * 359.71323 * 8 7 6 32 32 H 1.09006 * 109.47095 * 210.00107 * 10 9 8 33 33 H 1.09000 * 109.47522 * 330.00406 * 10 9 8 34 34 H 1.09006 * 109.46955 * 60.00180 * 12 11 10 35 35 H 1.08997 * 109.47655 * 179.97438 * 12 11 10 36 36 H 1.09001 * 109.47237 * 300.00714 * 12 11 10 37 37 H 1.09000 * 109.47428 * 59.99622 * 13 11 10 38 38 H 1.08996 * 109.47262 * 179.97438 * 13 11 10 39 39 H 1.09006 * 109.46824 * 299.99547 * 13 11 10 40 40 H 1.08991 * 109.46829 * 59.99866 * 14 11 10 41 41 H 1.08999 * 109.47150 * 180.02562 * 14 11 10 42 42 H 1.09000 * 109.47021 * 299.99970 * 14 11 10 43 43 H 1.08007 * 125.83164 * 180.02562 * 16 15 9 44 44 H 1.08002 * 126.44739 * 180.28056 * 17 3 2 45 45 H 1.08998 * 109.46907 * 4.95437 * 21 20 18 46 46 H 0.96703 * 113.99958 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1180 0.0000 4 6 1.8120 2.5121 -0.0005 5 8 0.6242 2.7642 0.0849 6 7 2.7085 3.5141 -0.0956 7 6 2.2664 4.8453 -0.2074 8 6 3.0570 5.9443 -0.3104 9 7 2.2428 7.0281 -0.3979 10 6 2.6740 8.4225 -0.5230 11 14 2.8416 8.8613 -2.3258 12 6 1.1976 8.6410 -3.1741 13 6 3.3907 10.6344 -2.4850 14 6 4.1050 7.7468 -3.1213 15 7 0.9180 6.5762 -0.3472 16 6 0.9309 5.2728 -0.2343 17 6 3.5781 0.6890 0.0061 18 6 3.5529 -0.7096 0.0036 19 35 5.0611 -1.8503 0.0089 20 6 2.2560 -1.1017 -0.0032 21 6 1.7716 -2.5287 -0.0074 22 8 0.8821 -2.7331 1.0922 23 14 0.8757 -2.8757 -1.6036 24 1 -0.3531 -2.0446 -1.6723 25 1 1.7607 -2.5462 -2.7497 26 1 0.5054 -4.3126 -1.6612 27 1 -0.3633 -0.0859 -1.0241 28 1 -0.3633 -0.8439 0.5865 29 1 -0.3634 0.9298 0.4376 30 1 3.6583 3.3175 -0.0870 31 1 4.1369 5.9552 -0.3170 32 1 1.9347 9.0746 -0.0576 33 1 3.6358 8.5514 -0.0267 34 1 0.4584 9.2931 -2.7087 35 1 1.2956 8.8981 -4.2287 36 1 0.8768 7.6035 -3.0809 37 1 4.3526 10.7629 -1.9888 38 1 3.4892 10.8910 -3.5398 39 1 2.6517 11.2867 -2.0195 40 1 3.7842 6.7093 -3.0281 41 1 4.2034 8.0038 -4.1759 42 1 5.0669 7.8757 -2.6250 43 1 0.0615 4.6349 -0.1719 44 1 4.4582 1.3151 0.0120 45 1 2.6239 -3.2019 0.0846 46 1 0.5302 -3.6318 1.1516 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:47:13 Heat of formation + Delta-G solvation = 31.317666 kcal Electronic energy + Delta-G solvation = -28710.069595 eV Core-core repulsion = 24614.706602 eV Total energy + Delta-G solvation = -4095.362993 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 414.064 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.83860 -42.14059 -40.05382 -37.86992 -36.01452 -34.33999 -33.69167 -32.29821 -30.99510 -30.29271 -29.68130 -28.57703 -28.44733 -27.58324 -27.29753 -26.30104 -23.54620 -22.45217 -22.08940 -20.97305 -20.23060 -18.80213 -18.70935 -18.17220 -17.18474 -16.94209 -16.67085 -16.45835 -16.03729 -15.61247 -15.36340 -14.99655 -14.89157 -14.64120 -14.36750 -14.34935 -14.31580 -14.27298 -14.08150 -13.93510 -13.78890 -13.76142 -13.53369 -13.41013 -13.25466 -13.16935 -13.16074 -12.82845 -12.36380 -12.19824 -12.02077 -11.79941 -11.64851 -11.35642 -11.21636 -11.03522 -10.93477 -10.88365 -10.73189 -10.00748 -9.72855 -9.25532 -8.54837 0.12518 0.69914 0.76174 0.90347 1.15427 1.23557 1.28486 1.42042 1.49790 1.57469 1.68622 1.77568 1.84912 1.92617 2.35043 2.41493 2.44663 3.02968 3.51784 3.56843 3.70550 3.83204 3.90164 4.02547 4.27874 4.28583 4.33443 4.43951 4.49198 4.56884 4.58806 4.61807 4.63278 4.64267 4.70285 4.75548 4.76682 4.76957 4.80270 5.15769 5.32115 5.33461 5.40856 5.57076 5.68050 5.87609 5.92580 6.03098 6.32712 6.35838 6.81543 7.09197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.047 3.953 2 N -0.383 5.383 3 C -0.033 4.033 4 C 0.596 3.404 5 O -0.530 6.530 6 N -0.628 5.628 7 C -0.003 4.003 8 C 0.018 3.982 9 N -0.343 5.343 10 C -0.169 4.169 11 Si 1.019 2.981 12 C -0.446 4.446 13 C -0.450 4.450 14 C -0.450 4.450 15 N -0.281 5.281 16 C 0.048 3.952 17 C -0.109 4.109 18 C -0.160 4.160 19 Br -0.020 7.020 20 C 0.093 3.907 21 C -0.062 4.062 22 O -0.543 6.543 23 Si 0.929 3.071 24 H -0.240 1.240 25 H -0.239 1.239 26 H -0.240 1.240 27 H 0.080 0.920 28 H 0.101 0.899 29 H 0.115 0.885 30 H 0.413 0.587 31 H 0.177 0.823 32 H 0.105 0.895 33 H 0.099 0.901 34 H 0.070 0.930 35 H 0.069 0.931 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.075 0.925 39 H 0.072 0.928 40 H 0.070 0.930 41 H 0.073 0.927 42 H 0.070 0.930 43 H 0.204 0.796 44 H 0.158 0.842 45 H 0.098 0.902 46 H 0.387 0.613 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.295 -0.419 -1.654 3.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 N -0.055 5.055 3 C -0.147 4.147 4 C 0.384 3.616 5 O -0.408 6.408 6 N -0.273 5.273 7 C -0.107 4.107 8 C -0.130 4.130 9 N -0.126 5.126 10 C -0.335 4.335 11 Si 1.213 2.787 12 C -0.554 4.554 13 C -0.558 4.558 14 C -0.558 4.558 15 N -0.104 5.104 16 C -0.138 4.138 17 C -0.137 4.137 18 C -0.246 4.246 19 Br 0.065 6.935 20 C -0.028 4.028 21 C -0.172 4.172 22 O -0.350 6.350 23 Si 0.748 3.252 24 H -0.163 1.163 25 H -0.162 1.162 26 H -0.162 1.162 27 H 0.099 0.901 28 H 0.119 0.881 29 H 0.133 0.867 30 H 0.249 0.751 31 H 0.195 0.805 32 H 0.123 0.877 33 H 0.118 0.882 34 H 0.090 0.910 35 H 0.088 0.912 36 H 0.090 0.910 37 H 0.090 0.910 38 H 0.094 0.906 39 H 0.091 0.909 40 H 0.089 0.911 41 H 0.093 0.907 42 H 0.089 0.911 43 H 0.221 0.779 44 H 0.175 0.825 45 H 0.116 0.884 46 H 0.236 0.764 Dipole moment (debyes) X Y Z Total from point charges 1.597 0.975 -2.302 2.966 hybrid contribution 0.986 -1.138 0.610 1.624 sum 2.583 -0.162 -1.692 3.092 Atomic orbital electron populations 1.22759 0.74763 1.07359 1.04430 1.43712 1.07330 1.03695 1.50776 1.19753 0.89773 0.87428 1.17793 1.16703 0.85334 0.82959 0.76583 1.90693 1.16190 1.83960 1.49994 1.42258 1.09947 1.02988 1.72064 1.17557 0.93368 0.83648 1.16142 1.21880 0.97347 0.86053 1.07748 1.47985 1.03717 1.05398 1.55474 1.26963 1.03898 0.80110 1.22505 0.79380 0.68094 0.67334 0.63854 1.26070 1.16669 1.05276 1.07421 1.26099 1.06040 1.18467 1.05215 1.26126 1.11493 1.10375 1.07776 1.77465 0.97279 1.11995 1.23677 1.24446 0.97340 0.91612 1.00417 1.21194 0.95100 0.92994 1.04381 1.20682 0.90952 0.94361 1.18599 1.96667 1.35686 1.62969 1.98212 1.19509 0.89007 0.87864 1.06451 1.24367 0.98709 0.92729 1.01403 1.86464 1.63827 1.36157 1.48508 0.86006 0.81071 0.82152 0.76010 1.16306 1.16202 1.16235 0.90107 0.88085 0.86667 0.75110 0.80545 0.87668 0.88241 0.91041 0.91232 0.91001 0.90960 0.90579 0.90869 0.91083 0.90750 0.91086 0.77940 0.82489 0.88421 0.76396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.04 8.99 59.85 0.54 0.58 16 2 N -0.38 -0.82 3.13 -115.59 -0.36 -1.18 16 3 C -0.03 -0.06 6.88 -81.99 -0.56 -0.63 16 4 C 0.60 1.45 7.74 -12.86 -0.10 1.35 16 5 O -0.53 -2.47 11.73 5.17 0.06 -2.41 16 6 N -0.63 -0.19 5.46 -11.22 -0.06 -0.25 16 7 C 0.00 -0.01 6.90 -83.90 -0.58 -0.58 16 8 C 0.02 0.00 11.44 -16.66 -0.19 -0.19 16 9 N -0.34 -0.35 3.01 -9.16 -0.03 -0.38 16 10 C -0.17 0.33 5.59 59.84 0.33 0.67 16 11 Si 1.02 -3.17 12.79 -169.99 -2.17 -5.35 16 12 C -0.45 0.12 8.65 101.05 0.87 1.00 16 13 C -0.45 1.30 8.65 101.05 0.87 2.18 16 14 C -0.45 1.07 8.65 101.05 0.87 1.94 16 15 N -0.28 -1.14 12.56 30.71 0.39 -0.75 16 16 C 0.05 0.19 10.84 -17.22 -0.19 0.00 16 17 C -0.11 -0.07 10.34 -39.09 -0.40 -0.47 16 18 C -0.16 -0.27 6.53 -39.95 -0.26 -0.53 16 19 Br -0.02 -0.02 33.06 -68.01 -2.25 -2.27 16 20 C 0.09 0.16 5.13 -81.89 -0.42 -0.26 16 21 C -0.06 0.03 2.78 36.01 0.10 0.13 16 22 O -0.54 0.58 11.28 -35.23 -0.40 0.18 16 23 Si 0.93 -0.88 26.87 -169.99 -4.57 -5.45 16 24 H -0.24 0.12 5.89 56.52 0.33 0.45 16 25 H -0.24 -0.13 7.11 56.52 0.40 0.27 16 26 H -0.24 0.35 7.11 56.52 0.40 0.75 16 27 H 0.08 0.01 7.01 -51.93 -0.36 -0.35 16 28 H 0.10 0.00 6.43 -51.93 -0.33 -0.34 16 29 H 0.11 0.21 5.97 -51.93 -0.31 -0.10 16 30 H 0.41 -1.19 7.72 -40.82 -0.32 -1.50 16 31 H 0.18 -0.67 8.06 -52.49 -0.42 -1.09 16 32 H 0.10 -0.19 7.96 -51.93 -0.41 -0.61 16 33 H 0.10 -0.41 7.96 -51.93 -0.41 -0.83 16 34 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 35 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 36 H 0.07 0.12 7.96 -51.93 -0.41 -0.30 16 37 H 0.07 -0.24 7.96 -51.93 -0.41 -0.66 16 38 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 39 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 40 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 41 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 42 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 43 H 0.20 0.93 5.93 -52.48 -0.31 0.62 16 44 H 0.16 -0.37 7.45 -52.49 -0.39 -0.76 16 45 H 0.10 -0.15 6.96 -51.93 -0.36 -0.51 16 46 H 0.39 -2.17 8.74 45.56 0.40 -1.78 16 LS Contribution 400.99 15.07 6.04 6.04 Total: 0.00 -8.87 400.99 -8.28 -17.16 By element: Atomic # 1 Polarization: -4.71 SS G_CDS: -5.82 Total: -10.54 kcal Atomic # 6 Polarization: 4.30 SS G_CDS: 0.89 Total: 5.19 kcal Atomic # 7 Polarization: -2.50 SS G_CDS: -0.06 Total: -2.56 kcal Atomic # 8 Polarization: -1.89 SS G_CDS: -0.34 Total: -2.23 kcal Atomic # 14 Polarization: -4.05 SS G_CDS: -6.74 Total: -10.79 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.25 Total: -2.27 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -8.87 -8.28 -17.16 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.474 kcal (2) G-P(sol) polarization free energy of solvation -8.874 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.600 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.156 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.318 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds