Wall clock time and date at job start Sun Mar 7 2021 10:47:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37632 * 125.67507 * 2 1 4 4 C 1.46662 * 126.22605 * 359.97438 * 3 2 1 5 5 O 1.21724 * 119.99973 * 4.67546 * 4 3 2 6 6 N 1.34783 * 120.00216 * 184.67422 * 4 3 2 7 7 C 1.40717 * 119.99758 * 174.75083 * 6 4 3 8 8 C 1.35768 * 126.07543 * 180.02562 * 7 6 4 9 9 N 1.35841 * 107.55793 * 179.97438 * 8 7 6 10 10 C 1.46493 * 126.05445 * 179.97438 * 9 8 7 11 11 Si 1.86298 * 109.46886 * 90.00618 * 10 9 8 12 12 C 1.86295 * 109.47566 * 59.99541 * 11 10 9 13 13 C 1.86303 * 109.47252 * 180.02562 * 11 10 9 14 14 C 1.86311 * 109.46994 * 299.99746 * 11 10 9 15 15 N 1.40070 * 107.88931 * 359.97438 * 9 8 7 16 16 C 1.30833 * 108.37236 * 359.97438 * 15 9 8 17 17 C 1.37895 * 107.54928 * 179.73336 * 3 2 1 18 18 C 1.39883 * 107.09268 * 0.26574 * 17 3 2 19 19 Br 1.89100 * 126.07204 * 179.97438 * 18 17 3 20 20 C 1.35492 * 107.85571 * 359.97438 * 18 17 3 21 21 C 1.50701 * 125.57324 * 180.02562 * 20 18 17 22 22 O 1.42901 * 109.47181 * 124.95597 * 21 20 18 23 23 Si 1.86300 * 109.46862 * 244.95529 * 21 20 18 24 24 H 1.48502 * 109.47140 * 294.94426 * 23 21 20 25 25 H 1.48500 * 109.47426 * 54.94259 * 23 21 20 26 26 H 1.48500 * 109.47220 * 174.94320 * 23 21 20 27 27 H 1.09003 * 109.46920 * 94.79702 * 1 2 3 28 28 H 1.09001 * 109.46825 * 214.79670 * 1 2 3 29 29 H 1.09000 * 109.47386 * 334.79584 * 1 2 3 30 30 H 0.97000 * 119.99714 * 354.76018 * 6 4 3 31 31 H 1.08000 * 126.22343 * 359.71323 * 8 7 6 32 32 H 1.09006 * 109.47095 * 210.00107 * 10 9 8 33 33 H 1.09000 * 109.47522 * 330.00406 * 10 9 8 34 34 H 1.09006 * 109.46955 * 60.00180 * 12 11 10 35 35 H 1.08997 * 109.47655 * 179.97438 * 12 11 10 36 36 H 1.09001 * 109.47237 * 300.00714 * 12 11 10 37 37 H 1.09000 * 109.47428 * 59.99622 * 13 11 10 38 38 H 1.08996 * 109.47262 * 179.97438 * 13 11 10 39 39 H 1.09006 * 109.46824 * 299.99547 * 13 11 10 40 40 H 1.08991 * 109.46829 * 59.99866 * 14 11 10 41 41 H 1.08999 * 109.47150 * 180.02562 * 14 11 10 42 42 H 1.09000 * 109.47021 * 299.99970 * 14 11 10 43 43 H 1.08007 * 125.83164 * 180.02562 * 16 15 9 44 44 H 1.08002 * 126.44739 * 180.28056 * 17 3 2 45 45 H 1.08998 * 109.46907 * 4.95437 * 21 20 18 46 46 H 0.96703 * 113.99958 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1180 0.0000 4 6 1.8120 2.5121 -0.0005 5 8 0.6242 2.7642 0.0849 6 7 2.7085 3.5141 -0.0956 7 6 2.2664 4.8453 -0.2074 8 6 3.0570 5.9443 -0.3104 9 7 2.2428 7.0281 -0.3979 10 6 2.6740 8.4225 -0.5230 11 14 2.8416 8.8613 -2.3258 12 6 1.1976 8.6410 -3.1741 13 6 3.3907 10.6344 -2.4850 14 6 4.1050 7.7468 -3.1213 15 7 0.9180 6.5762 -0.3472 16 6 0.9309 5.2728 -0.2343 17 6 3.5781 0.6890 0.0061 18 6 3.5529 -0.7096 0.0036 19 35 5.0611 -1.8503 0.0089 20 6 2.2560 -1.1017 -0.0032 21 6 1.7716 -2.5287 -0.0074 22 8 0.8821 -2.7331 1.0922 23 14 0.8757 -2.8757 -1.6036 24 1 -0.3531 -2.0446 -1.6723 25 1 1.7607 -2.5462 -2.7497 26 1 0.5054 -4.3126 -1.6612 27 1 -0.3633 -0.0859 -1.0241 28 1 -0.3633 -0.8439 0.5865 29 1 -0.3634 0.9298 0.4376 30 1 3.6583 3.3175 -0.0870 31 1 4.1369 5.9552 -0.3170 32 1 1.9347 9.0746 -0.0576 33 1 3.6358 8.5514 -0.0267 34 1 0.4584 9.2931 -2.7087 35 1 1.2956 8.8981 -4.2287 36 1 0.8768 7.6035 -3.0809 37 1 4.3526 10.7629 -1.9888 38 1 3.4892 10.8910 -3.5398 39 1 2.6517 11.2867 -2.0195 40 1 3.7842 6.7093 -3.0281 41 1 4.2034 8.0038 -4.1759 42 1 5.0669 7.8757 -2.6250 43 1 0.0615 4.6349 -0.1719 44 1 4.4582 1.3151 0.0120 45 1 2.6239 -3.2019 0.0846 46 1 0.5302 -3.6318 1.1516 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608520_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:47:12 Heat of formation + Delta-G solvation = 34.818693 kcal Electronic energy + Delta-G solvation = -28709.917779 eV Core-core repulsion = 24614.706602 eV Total energy + Delta-G solvation = -4095.211177 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 414.064 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.90312 -42.22418 -40.17738 -37.77433 -36.12362 -34.40293 -33.73917 -32.34985 -31.05315 -30.32719 -29.51418 -28.37244 -28.33287 -27.56087 -27.36136 -26.30987 -23.63011 -22.52552 -22.13012 -21.06254 -20.30797 -18.85866 -18.62250 -18.20493 -17.22464 -17.02271 -16.68757 -16.48683 -16.03465 -15.67797 -15.43739 -15.05947 -14.90072 -14.65509 -14.38436 -14.28498 -14.18080 -14.14142 -14.01404 -13.82886 -13.81290 -13.78615 -13.40991 -13.22385 -13.20116 -13.12938 -13.01429 -12.78247 -12.31288 -12.22172 -12.01361 -11.85853 -11.76603 -11.38627 -11.28304 -11.02870 -10.84205 -10.79417 -10.66026 -10.03143 -9.78801 -9.32214 -8.60786 0.05337 0.63261 0.76529 0.90803 1.17047 1.25743 1.35747 1.44871 1.56874 1.68107 1.69784 1.83068 1.88592 2.08686 2.29828 2.34002 2.58500 3.13551 3.50826 3.62139 3.76007 3.80535 3.99540 4.06026 4.22016 4.27361 4.35752 4.42738 4.56925 4.63656 4.69335 4.70123 4.72440 4.74323 4.76002 4.83957 4.85292 4.87744 4.89360 5.07158 5.29610 5.51933 5.61654 5.62153 5.66374 5.75057 5.82819 6.06940 6.35844 6.68113 6.68800 7.03593 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.394 5.394 3 C -0.051 4.051 4 C 0.590 3.410 5 O -0.562 6.562 6 N -0.613 5.613 7 C -0.023 4.023 8 C 0.037 3.963 9 N -0.339 5.339 10 C -0.190 4.190 11 Si 1.095 2.905 12 C -0.475 4.475 13 C -0.455 4.455 14 C -0.459 4.459 15 N -0.317 5.317 16 C 0.025 3.975 17 C -0.099 4.099 18 C -0.178 4.178 19 Br -0.014 7.014 20 C 0.084 3.916 21 C -0.061 4.061 22 O -0.555 6.555 23 Si 0.954 3.046 24 H -0.251 1.251 25 H -0.263 1.263 26 H -0.226 1.226 27 H 0.084 0.916 28 H 0.109 0.891 29 H 0.102 0.898 30 H 0.429 0.571 31 H 0.222 0.778 32 H 0.103 0.897 33 H 0.133 0.867 34 H 0.062 0.938 35 H 0.068 0.932 36 H 0.046 0.954 37 H 0.085 0.915 38 H 0.073 0.927 39 H 0.071 0.929 40 H 0.060 0.940 41 H 0.071 0.929 42 H 0.088 0.912 43 H 0.185 0.815 44 H 0.186 0.814 45 H 0.108 0.892 46 H 0.406 0.594 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.919 -0.166 -1.318 6.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.066 5.066 3 C -0.165 4.165 4 C 0.379 3.621 5 O -0.442 6.442 6 N -0.258 5.258 7 C -0.127 4.127 8 C -0.113 4.113 9 N -0.121 5.121 10 C -0.353 4.353 11 Si 1.284 2.716 12 C -0.579 4.579 13 C -0.564 4.564 14 C -0.567 4.567 15 N -0.142 5.142 16 C -0.160 4.160 17 C -0.126 4.126 18 C -0.263 4.263 19 Br 0.070 6.930 20 C -0.038 4.038 21 C -0.171 4.171 22 O -0.365 6.365 23 Si 0.773 3.227 24 H -0.174 1.174 25 H -0.187 1.187 26 H -0.149 1.149 27 H 0.102 0.898 28 H 0.128 0.872 29 H 0.120 0.880 30 H 0.268 0.732 31 H 0.238 0.762 32 H 0.121 0.879 33 H 0.151 0.849 34 H 0.081 0.919 35 H 0.087 0.913 36 H 0.065 0.935 37 H 0.104 0.896 38 H 0.092 0.908 39 H 0.090 0.910 40 H 0.080 0.920 41 H 0.090 0.910 42 H 0.107 0.893 43 H 0.202 0.798 44 H 0.203 0.797 45 H 0.126 0.874 46 H 0.258 0.742 Dipole moment (debyes) X Y Z Total from point charges 4.201 1.208 -1.968 4.793 hybrid contribution 0.162 -1.167 0.470 1.269 sum 4.363 0.041 -1.497 4.613 Atomic orbital electron populations 1.22726 0.74720 1.06974 1.04663 1.43867 1.07613 1.04047 1.51117 1.19837 0.90386 0.87171 1.19076 1.16892 0.85202 0.83570 0.76421 1.90687 1.17545 1.84399 1.51604 1.42099 1.10493 1.02126 1.71117 1.17690 0.92828 0.84710 1.17471 1.22548 0.98936 0.84752 1.05016 1.48286 1.02927 1.06764 1.54160 1.27401 1.05335 0.78505 1.24077 0.78257 0.64763 0.66824 0.61772 1.26504 1.19750 1.03375 1.08244 1.26148 1.06760 1.18192 1.05301 1.26225 1.12658 1.09827 1.07944 1.77393 0.99451 1.12138 1.25183 1.24303 0.98175 0.91849 1.01692 1.21557 0.95420 0.92989 1.02632 1.20885 0.91205 0.94978 1.19262 1.96657 1.35229 1.62874 1.98239 1.19955 0.89289 0.88693 1.05837 1.24393 0.99245 0.91710 1.01712 1.86422 1.63819 1.38075 1.48178 0.85672 0.79846 0.82484 0.74659 1.17437 1.18721 1.14859 0.89804 0.87225 0.87993 0.73204 0.76152 0.87866 0.84905 0.91890 0.91291 0.93473 0.89631 0.90762 0.90951 0.92037 0.91035 0.89265 0.79842 0.79670 0.87427 0.74158 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.19 8.99 127.77 1.15 1.34 16 2 N -0.39 -2.17 3.13 -519.61 -1.62 -3.79 16 3 C -0.05 -0.24 6.88 40.35 0.28 0.04 16 4 C 0.59 3.81 7.74 86.44 0.67 4.48 16 5 O -0.56 -6.92 11.73 -4.42 -0.05 -6.97 16 6 N -0.61 -0.57 5.46 -307.60 -1.68 -2.25 16 7 C -0.02 -0.10 6.90 37.63 0.26 0.16 16 8 C 0.04 -0.05 11.44 83.50 0.96 0.90 16 9 N -0.34 -0.60 3.01 -182.90 -0.55 -1.15 16 10 C -0.19 1.01 5.59 127.77 0.71 1.72 16 11 Si 1.09 -7.74 12.79 68.60 0.88 -6.86 16 12 C -0.47 -0.55 8.65 113.37 0.98 0.43 16 13 C -0.46 3.38 8.65 113.37 0.98 4.36 16 14 C -0.46 2.92 8.65 113.37 0.98 3.90 16 15 N -0.32 -3.18 12.56 -56.77 -0.71 -3.89 16 16 C 0.02 0.26 10.84 85.33 0.92 1.19 16 17 C -0.10 -0.10 10.34 22.59 0.23 0.13 16 18 C -0.18 -0.58 6.53 22.03 0.14 -0.44 16 19 Br -0.01 -0.02 33.06 -20.37 -0.67 -0.69 16 20 C 0.08 0.33 5.13 41.34 0.21 0.54 16 21 C -0.06 0.06 2.78 71.24 0.20 0.26 16 22 O -0.55 1.28 11.28 -148.98 -1.68 -0.40 16 23 Si 0.95 -1.50 26.87 68.60 1.84 0.34 16 24 H -0.25 0.01 5.89 99.48 0.59 0.60 16 25 H -0.26 -0.59 7.11 99.48 0.71 0.12 16 26 H -0.23 0.85 7.11 99.48 0.71 1.56 16 27 H 0.08 0.21 7.01 -2.39 -0.02 0.19 16 28 H 0.11 0.15 6.43 -2.39 -0.02 0.13 16 29 H 0.10 0.67 5.97 -2.39 -0.01 0.66 16 30 H 0.43 -2.89 7.72 -92.71 -0.72 -3.61 16 31 H 0.22 -2.50 8.06 -2.91 -0.02 -2.52 16 32 H 0.10 -0.44 7.96 -2.38 -0.02 -0.46 16 33 H 0.13 -1.56 7.96 -2.39 -0.02 -1.58 16 34 H 0.06 0.14 7.96 -2.38 -0.02 0.12 16 35 H 0.07 0.03 7.96 -2.39 -0.02 0.01 16 36 H 0.05 0.29 7.96 -2.39 -0.02 0.27 16 37 H 0.08 -0.81 7.96 -2.39 -0.02 -0.83 16 38 H 0.07 -0.48 7.96 -2.39 -0.02 -0.49 16 39 H 0.07 -0.49 7.96 -2.38 -0.02 -0.51 16 40 H 0.06 -0.23 7.96 -2.39 -0.02 -0.25 16 41 H 0.07 -0.38 7.96 -2.39 -0.02 -0.39 16 42 H 0.09 -0.86 7.96 -2.39 -0.02 -0.88 16 43 H 0.18 2.48 5.93 -2.91 -0.02 2.46 16 44 H 0.19 -1.15 7.45 -2.91 -0.02 -1.17 16 45 H 0.11 -0.37 6.96 -2.39 -0.02 -0.38 16 46 H 0.41 -4.82 8.74 -74.06 -0.65 -5.46 16 Total: 0.00 -23.83 400.99 4.73 -19.10 By element: Atomic # 1 Polarization: -12.73 SS G_CDS: 0.30 Total: -12.43 kcal Atomic # 6 Polarization: 10.33 SS G_CDS: 8.68 Total: 19.01 kcal Atomic # 7 Polarization: -6.52 SS G_CDS: -4.57 Total: -11.08 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -1.73 Total: -7.38 kcal Atomic # 14 Polarization: -9.24 SS G_CDS: 2.72 Total: -6.52 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.67 Total: -0.69 kcal Total: -23.83 4.73 -19.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.917 kcal (2) G-P(sol) polarization free energy of solvation -23.828 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.098 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds