Wall clock time and date at job start Sun Mar 7 2021 10:51:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86303 * 109.47161 * 2 1 4 4 C 1.86299 * 109.47217 * 119.99499 * 2 1 3 5 5 C 1.86293 * 109.47364 * 239.99588 * 2 1 3 6 6 N 1.46505 * 109.46974 * 60.00146 * 5 2 1 7 7 C 1.35809 * 126.05363 * 90.00371 * 6 5 2 8 8 C 1.35753 * 107.56243 * 179.97438 * 7 6 5 9 9 N 1.40770 * 126.08077 * 179.97438 * 8 7 6 10 10 C 1.34779 * 119.99880 * 179.97438 * 9 8 7 11 11 O 1.21308 * 119.99988 * 359.97438 * 10 9 8 12 12 C 1.50700 * 119.99724 * 180.02562 * 10 9 8 13 13 O 1.42900 * 109.46872 * 179.97438 * 12 10 9 14 14 C 1.35918 * 116.99940 * 179.97438 * 13 12 10 15 15 C 1.38676 * 120.05561 * 359.73194 * 14 13 12 16 16 C 1.38194 * 119.94922 * 179.71737 * 15 14 13 17 17 C 1.38236 * 120.07038 * 0.53152 * 16 15 14 18 18 C 1.50707 * 119.94017 * 179.74180 * 17 16 15 19 19 O 1.42906 * 109.46799 * 120.01910 * 18 17 16 20 20 Si 1.86300 * 109.47001 * 0.02562 * 18 17 16 21 21 H 1.48503 * 109.47095 * 59.99676 * 20 18 17 22 22 H 1.48499 * 109.47206 * 179.97438 * 20 18 17 23 23 H 1.48506 * 109.47129 * 299.99708 * 20 18 17 24 24 C 1.38283 * 120.12151 * 359.76239 * 17 16 15 25 25 C 1.38195 * 120.04400 * 359.96349 * 24 17 16 26 26 Br 1.89101 * 120.03536 * 180.02562 * 25 24 17 27 27 C 1.40255 * 107.84084 * 359.97438 * 8 7 6 28 28 N 1.30830 * 108.33140 * 359.75546 * 27 8 7 29 29 H 1.09001 * 109.46570 * 60.00396 * 1 2 3 30 30 H 1.09001 * 109.47076 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47204 * 300.00331 * 1 2 3 32 32 H 1.09000 * 109.47332 * 59.99747 * 3 2 1 33 33 H 1.09002 * 109.47176 * 179.97438 * 3 2 1 34 34 H 1.09004 * 109.46801 * 299.99758 * 3 2 1 35 35 H 1.09001 * 109.47058 * 60.00032 * 4 2 1 36 36 H 1.09002 * 109.47782 * 180.02562 * 4 2 1 37 37 H 1.09000 * 109.47172 * 300.00189 * 4 2 1 38 38 H 1.09002 * 109.47236 * 180.02562 * 5 2 1 39 39 H 1.08998 * 109.47688 * 299.99834 * 5 2 1 40 40 H 1.08002 * 126.22167 * 359.93915 * 7 6 5 41 41 H 0.96996 * 120.00001 * 0.02562 * 9 8 7 42 42 H 1.09003 * 109.47022 * 299.99777 * 12 10 9 43 43 H 1.08999 * 109.47369 * 60.00024 * 12 10 9 44 44 H 1.08001 * 120.02561 * 359.97438 * 15 14 13 45 45 H 1.08000 * 119.96211 * 180.27266 * 16 15 14 46 46 H 1.08995 * 109.47213 * 240.01979 * 18 17 16 47 47 H 0.96700 * 113.99778 * 299.99953 * 19 18 17 48 48 H 1.08000 * 119.97976 * 179.97438 * 24 17 16 49 49 H 1.08000 * 125.83430 * 179.97438 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8781 1.5212 5 6 2.4841 -0.8783 -1.5210 6 7 1.9957 -0.1877 -2.7172 7 6 2.6259 0.8229 -3.3699 8 6 1.8455 1.1808 -4.4215 9 7 2.1293 2.1928 -5.3579 10 6 1.2637 2.4462 -6.3594 11 8 0.2402 1.8019 -6.4541 12 6 1.5678 3.5292 -7.3623 13 8 0.5081 3.6046 -8.3179 14 6 0.6270 4.5381 -9.2987 15 6 1.7376 5.3677 -9.3371 16 6 1.8590 6.3120 -10.3387 17 6 0.8695 6.4378 -11.2957 18 6 1.0022 7.4726 -12.3833 19 8 1.0047 6.8263 -13.6579 20 14 2.5972 8.4086 -12.1586 21 1 3.7404 7.4636 -12.2323 22 1 2.7283 9.4279 -13.2306 23 1 2.5948 9.0802 -10.8341 24 6 -0.2421 5.6162 -11.2568 25 6 -0.3658 4.6664 -10.2606 26 35 -1.8857 3.5425 -10.2080 27 6 0.7061 0.3630 -4.4090 28 7 0.7996 -0.4574 -3.3942 29 1 -0.3632 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5139 0.8899 32 1 2.1207 2.2704 0.8899 33 1 3.5740 1.7565 0.0005 34 1 2.1207 2.2703 -0.8901 35 1 2.1207 -1.9058 1.5213 36 1 3.5740 -0.8777 1.5215 37 1 2.1207 -0.3642 2.4111 38 1 3.5741 -0.8787 -1.5207 39 1 2.1208 -1.9060 -1.5210 40 1 3.5750 1.2625 -3.1010 41 1 2.9482 2.7072 -5.2829 42 1 1.6619 4.4853 -6.8472 43 1 2.5022 3.2987 -7.8739 44 1 2.5090 5.2730 -8.5872 45 1 2.7260 6.9553 -10.3713 46 1 0.1631 8.1662 -12.3293 47 1 1.7262 6.1935 -13.7766 48 1 -1.0140 5.7168 -12.0054 49 1 -0.1076 0.4015 -5.1181 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608520_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:51:44 Heat of formation + Delta-G solvation = -20.500380 kcal Electronic energy + Delta-G solvation = -31124.220791 eV Core-core repulsion = 26645.128377 eV Total energy + Delta-G solvation = -4479.092413 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 441.068 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.36594 -41.58829 -40.45696 -39.08549 -37.20559 -35.93387 -33.77097 -33.57690 -31.94209 -31.07184 -30.37367 -29.60546 -29.21435 -28.38627 -28.31916 -26.87674 -26.23416 -24.15620 -23.00595 -22.38872 -22.01791 -21.10007 -19.58904 -18.72127 -18.21232 -17.94165 -17.54124 -17.12151 -16.79839 -16.48465 -16.31249 -16.08343 -15.78012 -15.56151 -15.30612 -15.07502 -14.92272 -14.56623 -14.19777 -14.16017 -14.10463 -13.91463 -13.85309 -13.80445 -13.74159 -13.67056 -13.41617 -13.21642 -13.14118 -13.02420 -12.35653 -12.26567 -12.21025 -12.11453 -12.02691 -11.86961 -11.76033 -11.65100 -11.38122 -11.20205 -10.94525 -10.85363 -10.80581 -10.39086 -10.03710 -9.95756 -9.30800 -8.64036 -0.05981 0.13144 0.65353 0.74331 1.20190 1.23146 1.26691 1.52048 1.56067 1.56393 1.69122 1.87348 1.98475 2.05521 2.12227 2.40307 2.52638 2.57594 3.45894 3.50888 3.66557 3.75084 3.77490 3.81574 4.00355 4.02077 4.09092 4.11681 4.27233 4.35626 4.57328 4.64063 4.66651 4.68100 4.69629 4.73075 4.74553 4.83247 4.84626 4.85876 4.87143 4.88730 4.98931 5.08353 5.23030 5.49026 5.50328 5.60596 5.65687 5.75197 6.06694 6.08710 6.43803 6.69243 6.74250 7.15115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.477 4.477 2 Si 1.094 2.906 3 C -0.456 4.456 4 C -0.455 4.455 5 C -0.189 4.189 6 N -0.340 5.340 7 C 0.037 3.963 8 C -0.024 4.024 9 N -0.619 5.619 10 C 0.508 3.492 11 O -0.554 6.554 12 C 0.039 3.961 13 O -0.305 6.305 14 C 0.149 3.851 15 C -0.189 4.189 16 C -0.068 4.068 17 C -0.152 4.152 18 C -0.081 4.081 19 O -0.555 6.555 20 Si 0.985 3.015 21 H -0.242 1.242 22 H -0.281 1.281 23 H -0.247 1.247 24 C -0.032 4.032 25 C -0.143 4.143 26 Br -0.054 7.054 27 C 0.020 3.980 28 N -0.322 5.322 29 H 0.045 0.955 30 H 0.060 0.940 31 H 0.068 0.932 32 H 0.071 0.929 33 H 0.090 0.910 34 H 0.061 0.939 35 H 0.070 0.930 36 H 0.086 0.914 37 H 0.073 0.927 38 H 0.134 0.866 39 H 0.101 0.899 40 H 0.225 0.775 41 H 0.434 0.566 42 H 0.136 0.864 43 H 0.136 0.864 44 H 0.180 0.820 45 H 0.153 0.847 46 H 0.122 0.878 47 H 0.389 0.611 48 H 0.141 0.859 49 H 0.178 0.822 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.974 4.997 5.022 14.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.581 4.581 2 Si 1.283 2.717 3 C -0.564 4.564 4 C -0.564 4.564 5 C -0.353 4.353 6 N -0.123 5.123 7 C -0.112 4.112 8 C -0.128 4.128 9 N -0.268 5.268 10 C 0.295 3.705 11 O -0.431 6.431 12 C -0.038 4.038 13 O -0.217 6.217 14 C 0.101 3.899 15 C -0.208 4.208 16 C -0.086 4.086 17 C -0.153 4.153 18 C -0.191 4.191 19 O -0.363 6.363 20 Si 0.808 3.192 21 H -0.165 1.165 22 H -0.206 1.206 23 H -0.171 1.171 24 C -0.052 4.052 25 C -0.223 4.223 26 Br 0.031 6.969 27 C -0.165 4.165 28 N -0.146 5.146 29 H 0.064 0.936 30 H 0.079 0.921 31 H 0.087 0.913 32 H 0.090 0.910 33 H 0.109 0.891 34 H 0.081 0.919 35 H 0.090 0.910 36 H 0.105 0.895 37 H 0.093 0.907 38 H 0.153 0.847 39 H 0.119 0.881 40 H 0.242 0.758 41 H 0.273 0.727 42 H 0.153 0.847 43 H 0.153 0.847 44 H 0.197 0.803 45 H 0.171 0.829 46 H 0.140 0.860 47 H 0.238 0.762 48 H 0.159 0.841 49 H 0.195 0.805 Dipole moment (debyes) X Y Z Total from point charges 11.240 3.747 5.708 13.152 hybrid contribution 0.224 0.190 -0.689 0.749 sum 11.464 3.937 5.019 13.120 Atomic orbital electron populations 1.26545 1.24697 1.03726 1.03129 0.78274 0.63806 0.66483 0.63136 1.26192 1.07528 1.18344 1.04381 1.26146 1.07382 1.08188 1.14679 1.27396 1.06725 1.05073 0.96114 1.48303 1.14787 1.26921 1.22250 1.22584 1.00774 0.94217 0.93642 1.17726 0.98279 0.99502 0.97320 1.42307 1.24339 1.34907 1.25236 1.20597 0.83220 0.84666 0.82032 1.90696 1.27660 1.50706 1.74003 1.22760 0.91492 0.99746 0.89831 1.86241 1.45350 1.52848 1.37251 1.18769 0.93881 0.89319 0.87914 1.21537 0.98316 0.97888 1.03044 1.21267 0.98016 0.96605 0.92686 1.20392 0.95346 1.00152 0.99444 1.25120 1.14080 0.97342 0.82564 1.86505 1.56233 1.61240 1.32278 0.85203 0.75141 0.78826 0.80056 1.16532 1.20637 1.17066 1.20891 0.97937 0.91497 0.94825 1.21309 0.96003 1.03431 1.01592 1.96771 1.36226 1.65179 1.98720 1.24286 0.99914 0.94884 0.97457 1.77403 1.03592 1.24221 1.09387 0.93606 0.92050 0.91283 0.91015 0.89076 0.91945 0.91042 0.89507 0.90747 0.84748 0.88086 0.75818 0.72679 0.84652 0.84662 0.80299 0.82933 0.86035 0.76151 0.84124 0.80486 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.48 -0.71 8.65 113.37 0.98 0.27 16 2 Si 1.09 -8.16 12.79 68.60 0.88 -7.28 16 3 C -0.46 3.41 8.65 113.37 0.98 4.39 16 4 C -0.46 3.57 8.65 113.37 0.98 4.55 16 5 C -0.19 1.09 5.59 127.77 0.71 1.80 16 6 N -0.34 -0.44 3.01 -182.93 -0.55 -0.99 16 7 C 0.04 -0.12 11.44 83.50 0.96 0.84 16 8 C -0.02 -0.06 6.90 37.62 0.26 0.20 16 9 N -0.62 2.41 5.47 -304.03 -1.66 0.75 16 10 C 0.51 0.99 7.88 87.66 0.69 1.68 16 11 O -0.55 -7.64 13.66 15.92 0.22 -7.42 16 12 C 0.04 -0.23 5.22 71.24 0.37 0.14 16 13 O -0.30 -1.30 9.01 -73.60 -0.66 -1.96 16 14 C 0.15 0.31 6.68 22.52 0.15 0.46 16 15 C -0.19 1.00 9.04 22.36 0.20 1.21 16 16 C -0.07 0.35 8.66 22.26 0.19 0.54 16 17 C -0.15 0.28 5.39 -19.85 -0.11 0.17 16 18 C -0.08 0.28 2.82 71.24 0.20 0.48 16 19 O -0.56 0.60 12.77 -148.98 -1.90 -1.30 16 20 Si 0.98 -5.23 25.07 68.60 1.72 -3.52 16 21 H -0.24 1.60 7.11 99.48 0.71 2.31 16 22 H -0.28 0.10 7.11 99.48 0.71 0.81 16 23 H -0.25 1.40 7.11 99.48 0.71 2.11 16 24 C -0.03 -0.08 9.35 22.27 0.21 0.13 16 25 C -0.14 -0.79 6.24 22.40 0.14 -0.65 16 26 Br -0.05 -0.53 33.16 -20.37 -0.68 -1.20 16 27 C 0.02 0.22 10.84 85.33 0.92 1.14 16 28 N -0.32 -3.39 12.56 -56.77 -0.71 -4.10 16 29 H 0.04 0.30 7.96 -2.39 -0.02 0.28 16 30 H 0.06 0.17 7.96 -2.39 -0.02 0.15 16 31 H 0.07 0.05 7.96 -2.39 -0.02 0.03 16 32 H 0.07 -0.45 7.96 -2.39 -0.02 -0.47 16 33 H 0.09 -1.01 7.96 -2.39 -0.02 -1.03 16 34 H 0.06 -0.32 7.96 -2.38 -0.02 -0.34 16 35 H 0.07 -0.49 7.96 -2.39 -0.02 -0.51 16 36 H 0.09 -0.88 7.96 -2.39 -0.02 -0.90 16 37 H 0.07 -0.51 7.96 -2.39 -0.02 -0.52 16 38 H 0.13 -1.70 7.96 -2.39 -0.02 -1.71 16 39 H 0.10 -0.43 7.96 -2.39 -0.02 -0.45 16 40 H 0.23 -3.10 8.06 -2.91 -0.02 -3.12 16 41 H 0.43 -6.15 8.83 -92.71 -0.82 -6.96 16 42 H 0.14 -1.80 7.65 -2.39 -0.02 -1.82 16 43 H 0.14 -1.80 7.68 -2.39 -0.02 -1.82 16 44 H 0.18 -2.49 6.30 -2.91 -0.02 -2.51 16 45 H 0.15 -1.50 4.87 -2.91 -0.01 -1.52 16 46 H 0.12 -0.52 7.96 -2.39 -0.02 -0.54 16 47 H 0.39 -2.98 8.70 -74.06 -0.64 -3.62 16 48 H 0.14 0.35 8.06 -2.91 -0.02 0.32 16 49 H 0.18 2.78 5.92 -2.91 -0.02 2.76 16 Total: 0.00 -33.52 432.42 4.79 -28.73 By element: Atomic # 1 Polarization: -19.36 SS G_CDS: 0.30 Total: -19.07 kcal Atomic # 6 Polarization: 9.52 SS G_CDS: 7.85 Total: 17.36 kcal Atomic # 7 Polarization: -1.42 SS G_CDS: -2.93 Total: -4.35 kcal Atomic # 8 Polarization: -8.34 SS G_CDS: -2.35 Total: -10.68 kcal Atomic # 14 Polarization: -13.39 SS G_CDS: 2.60 Total: -10.80 kcal Atomic # 35 Polarization: -0.53 SS G_CDS: -0.68 Total: -1.20 kcal Total: -33.52 4.79 -28.73 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.234 kcal (2) G-P(sol) polarization free energy of solvation -33.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.289 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.789 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds