Wall clock time and date at job start Sun Mar 7 2021 10:52:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35961 * 117.00013 * 2 1 4 4 C 1.39448 * 120.11713 * 179.97438 * 3 2 1 5 5 O 1.34782 * 133.24971 * 359.97438 * 4 3 2 6 6 C 1.34919 * 110.84552 * 180.02562 * 5 4 3 7 7 C 1.46973 * 125.13917 * 179.97438 * 6 5 4 8 8 O 1.21680 * 119.99780 * 180.02562 * 7 6 5 9 9 N 1.34775 * 119.99762 * 0.02562 * 7 6 5 10 10 C 1.40694 * 119.99744 * 180.02562 * 9 7 6 11 11 C 1.35774 * 126.08359 * 179.71540 * 10 9 7 12 12 N 1.35831 * 107.55961 * 179.83467 * 11 10 9 13 13 C 1.46497 * 126.05402 * 180.17907 * 12 11 10 14 14 Si 1.86301 * 109.47145 * 270.31427 * 13 12 11 15 15 C 1.86300 * 109.47378 * 59.99750 * 14 13 12 16 16 C 1.86296 * 109.47473 * 180.02562 * 14 13 12 17 17 C 1.86303 * 109.47057 * 300.00107 * 14 13 12 18 18 N 1.40064 * 107.89173 * 0.42418 * 12 11 10 19 19 C 1.30832 * 108.37826 * 359.73649 * 18 12 11 20 20 C 1.35823 * 109.72148 * 359.97438 * 6 5 4 21 21 C 1.40611 * 119.13156 * 180.02562 * 4 3 2 22 22 C 1.39773 * 120.12669 * 359.97438 * 21 4 3 23 23 C 1.50695 * 120.10000 * 180.02562 * 22 21 4 24 24 O 1.42904 * 109.47037 * 74.97478 * 23 22 21 25 25 Si 1.86301 * 109.47473 * 194.97551 * 23 22 21 26 26 H 1.48503 * 109.47058 * 60.00114 * 25 23 22 27 27 H 1.48496 * 109.47026 * 179.97438 * 25 23 22 28 28 H 1.48500 * 109.47110 * 300.00066 * 25 23 22 29 29 C 1.36641 * 119.80991 * 359.97438 * 22 21 4 30 30 C 1.38268 * 120.12505 * 0.27329 * 3 2 1 31 31 H 1.09002 * 109.46938 * 59.99905 * 1 2 3 32 32 H 1.08993 * 109.47090 * 179.97438 * 1 2 3 33 33 H 1.08998 * 109.47441 * 300.00465 * 1 2 3 34 34 H 0.96991 * 120.00567 * 359.97438 * 9 7 6 35 35 H 1.08005 * 126.21791 * 359.96375 * 11 10 9 36 36 H 1.09002 * 109.47263 * 30.31215 * 13 12 11 37 37 H 1.08997 * 109.47059 * 150.31780 * 13 12 11 38 38 H 1.09002 * 109.46893 * 60.00296 * 15 14 13 39 39 H 1.08996 * 109.47604 * 179.97438 * 15 14 13 40 40 H 1.08998 * 109.47169 * 300.00605 * 15 14 13 41 41 H 1.09006 * 109.47288 * 59.99808 * 16 14 13 42 42 H 1.08996 * 109.47362 * 179.97438 * 16 14 13 43 43 H 1.09007 * 109.47002 * 300.00361 * 16 14 13 44 44 H 1.08998 * 109.46928 * 59.99739 * 17 14 13 45 45 H 1.08996 * 109.47352 * 180.02562 * 17 14 13 46 46 H 1.09001 * 109.47032 * 300.00112 * 17 14 13 47 47 H 1.08000 * 125.83103 * 180.02562 * 19 18 12 48 48 H 1.07994 * 126.96065 * 179.97438 * 20 6 5 49 49 H 1.09002 * 109.47131 * 314.97949 * 23 22 21 50 50 H 0.96698 * 113.99915 * 60.00427 * 24 23 22 51 51 H 1.08002 * 119.75149 * 179.97438 * 29 22 21 52 52 H 1.08001 * 119.65734 * 359.97438 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2872 0.0005 5 8 4.4142 0.3572 0.0016 6 6 5.6317 0.9385 0.0023 7 6 6.9129 0.2183 0.0040 8 8 7.9596 0.8389 0.0050 9 7 6.9284 -1.1293 0.0044 10 6 8.1549 -1.8187 0.0066 11 6 8.3143 -3.1670 0.0128 12 7 9.6485 -3.4219 0.0091 13 6 10.2731 -4.7471 0.0097 14 14 10.5347 -5.3095 1.7664 15 6 8.8924 -5.3967 2.6417 16 6 11.3297 -6.9943 1.7673 17 6 11.6442 -4.0995 2.6472 18 7 10.3213 -2.1935 0.0103 19 6 9.4305 -1.2353 0.0089 20 6 5.4945 2.2898 0.0011 21 6 4.0554 2.5509 0.0011 22 6 3.2767 3.7116 0.0005 23 6 3.9382 5.0655 0.0005 24 8 4.4617 5.3399 -1.3006 25 14 2.6862 6.3686 0.4536 26 1 2.1423 6.0835 1.8057 27 1 3.3384 7.7027 0.4542 28 1 1.5802 6.3581 -0.5372 29 6 1.9137 3.6151 -0.0011 30 6 1.2958 2.3727 0.0057 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 -0.3634 0.5139 0.8899 34 1 6.0941 -1.6240 0.0040 35 1 7.5240 -3.9031 0.0174 36 1 9.6240 -5.4550 -0.5056 37 1 11.2340 -4.6960 -0.5023 38 1 8.2432 -6.1046 2.1264 39 1 9.0454 -5.7262 3.6694 40 1 8.4277 -4.4107 2.6412 41 1 12.2907 -6.9429 1.2554 42 1 11.4832 -7.3232 2.7951 43 1 10.6809 -7.7025 1.2518 44 1 11.1795 -3.1136 2.6467 45 1 11.7977 -4.4288 3.6748 46 1 12.6051 -4.0485 2.1351 47 1 9.6413 -0.1760 0.0089 48 1 6.2874 3.0230 0.0017 49 1 4.7501 5.0732 0.7278 50 1 3.7935 5.3489 -1.9995 51 1 1.3128 4.5126 -0.0011 52 1 0.2175 2.3120 0.0097 RHF calculation, no. of doubly occupied orbitals= 72 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_6672420.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:52:26 Heat of formation + Delta-G solvation = -19.456584 kcal Electronic energy + Delta-G solvation = -35079.825595 eV Core-core repulsion = 30365.461973 eV Total energy + Delta-G solvation = -4714.363621 eV No. of doubly occupied orbitals = 72 Molecular weight (most abundant/longest-lived isotopes) = 403.157 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -43.67248 -42.24424 -40.82659 -40.15527 -39.09800 -37.01265 -35.96713 -33.69183 -33.53383 -31.97586 -31.20172 -30.26330 -29.67057 -28.73177 -28.55160 -28.42511 -27.14168 -26.30821 -25.02974 -23.98443 -22.77799 -22.09800 -21.72245 -21.21589 -19.57453 -18.91673 -18.65933 -18.31602 -17.79730 -17.67141 -17.04353 -16.77717 -16.71053 -16.40862 -16.24427 -15.88386 -15.77623 -15.55618 -15.14791 -15.03904 -14.69763 -14.54775 -14.35008 -14.29892 -14.12892 -14.07117 -13.92604 -13.79682 -13.61442 -13.55215 -13.44779 -13.39734 -13.36872 -13.23805 -13.15020 -12.64612 -12.39212 -12.21683 -12.18386 -12.09949 -11.67975 -11.65035 -11.36908 -11.28951 -11.02454 -10.93237 -10.91684 -10.45309 -10.00729 -9.80619 -9.00855 -8.57911 -0.60752 0.11150 0.59071 0.90658 1.08391 1.22385 1.33996 1.35953 1.48134 1.50726 1.68951 1.78451 1.84320 1.87184 2.01358 2.16651 2.33282 2.41453 2.42856 3.22709 3.41834 3.52364 3.62359 3.68971 3.82928 3.86354 3.87798 4.01064 4.07514 4.07905 4.17747 4.28798 4.44015 4.45851 4.49722 4.50060 4.57910 4.59787 4.62562 4.64068 4.65290 4.74457 4.78553 4.82032 4.83133 4.88635 5.06990 5.07345 5.23259 5.32818 5.34470 5.41939 5.59049 5.63611 5.90722 6.01745 6.15705 6.33683 6.53229 6.79377 6.98891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.048 3.952 5 O -0.175 6.175 6 C -0.022 4.022 7 C 0.603 3.397 8 O -0.499 6.499 9 N -0.628 5.628 10 C -0.009 4.009 11 C 0.022 3.978 12 N -0.343 5.343 13 C -0.169 4.169 14 Si 1.019 2.981 15 C -0.450 4.450 16 C -0.449 4.449 17 C -0.447 4.447 18 N -0.280 5.280 19 C 0.049 3.951 20 C -0.098 4.098 21 C -0.080 4.080 22 C -0.097 4.097 23 C -0.079 4.079 24 O -0.533 6.533 25 Si 0.950 3.050 26 H -0.248 1.248 27 H -0.250 1.250 28 H -0.251 1.251 29 C -0.102 4.102 30 C -0.177 4.177 31 H 0.060 0.940 32 H 0.105 0.895 33 H 0.060 0.940 34 H 0.417 0.583 35 H 0.178 0.822 36 H 0.099 0.901 37 H 0.106 0.894 38 H 0.070 0.930 39 H 0.074 0.926 40 H 0.070 0.930 41 H 0.072 0.928 42 H 0.075 0.925 43 H 0.071 0.929 44 H 0.071 0.929 45 H 0.069 0.931 46 H 0.071 0.929 47 H 0.206 0.794 48 H 0.178 0.822 49 H 0.119 0.881 50 H 0.376 0.624 51 H 0.136 0.864 52 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.545 -3.383 0.703 7.401 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.001 4.001 5 O -0.077 6.077 6 C -0.072 4.072 7 C 0.390 3.610 8 O -0.375 6.375 9 N -0.272 5.272 10 C -0.113 4.113 11 C -0.127 4.127 12 N -0.125 5.125 13 C -0.335 4.335 14 Si 1.214 2.786 15 C -0.558 4.558 16 C -0.558 4.558 17 C -0.555 4.555 18 N -0.102 5.102 19 C -0.137 4.137 20 C -0.118 4.118 21 C -0.081 4.081 22 C -0.097 4.097 23 C -0.190 4.190 24 O -0.338 6.338 25 Si 0.772 3.228 26 H -0.171 1.171 27 H -0.174 1.174 28 H -0.175 1.175 29 C -0.120 4.120 30 C -0.196 4.196 31 H 0.079 0.921 32 H 0.124 0.876 33 H 0.079 0.921 34 H 0.253 0.747 35 H 0.195 0.805 36 H 0.118 0.882 37 H 0.124 0.876 38 H 0.089 0.911 39 H 0.093 0.907 40 H 0.089 0.911 41 H 0.091 0.909 42 H 0.094 0.906 43 H 0.090 0.910 44 H 0.090 0.910 45 H 0.088 0.912 46 H 0.090 0.910 47 H 0.222 0.778 48 H 0.195 0.805 49 H 0.137 0.863 50 H 0.223 0.777 51 H 0.153 0.847 52 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.527 -3.165 1.197 5.652 hybrid contribution -1.973 -0.388 -0.566 2.090 sum -6.500 -3.554 0.630 7.435 Atomic orbital electron populations 1.23188 0.77335 1.04756 1.01781 1.86171 1.22137 1.25670 1.88389 1.17730 0.86517 0.85851 0.99489 1.18763 0.87401 0.86973 1.06931 1.84044 1.12644 1.34745 1.76221 1.21755 0.83557 0.92538 1.09383 1.16491 0.85668 0.81328 0.77538 1.90809 1.29985 1.67187 1.49531 1.42556 1.07512 1.05580 1.71514 1.17599 0.86463 0.90397 1.16847 1.21902 0.87797 0.95450 1.07534 1.48005 1.03182 1.05585 1.55727 1.26974 1.02680 0.81795 1.22067 0.79378 0.68124 0.67020 0.64122 1.26134 1.16671 1.04643 1.08386 1.26095 1.07612 1.16980 1.05100 1.26070 1.10227 1.11441 1.07721 1.77470 1.20855 0.88174 1.23751 1.24471 0.88287 1.00564 1.00390 1.22763 0.94781 0.94198 1.00093 1.19382 0.92637 0.91965 1.04147 1.19440 0.92734 0.94600 1.02973 1.24993 1.06830 0.97541 0.89618 1.86559 1.37952 1.93378 1.15952 0.85698 0.77287 0.78519 0.81273 1.17089 1.17400 1.17455 1.20556 0.93561 0.97806 1.00035 1.20952 1.00351 0.90547 1.07701 0.92117 0.87628 0.92100 0.74705 0.80492 0.88224 0.87591 0.91108 0.90728 0.91089 0.90851 0.90569 0.90970 0.90965 0.91218 0.91013 0.77797 0.80499 0.86304 0.77702 0.84671 0.83532 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.38 10.50 -19.62 -0.21 -0.58 16 3 C 0.15 0.23 6.70 -39.12 -0.26 -0.03 16 4 C 0.05 0.14 7.35 -38.24 -0.28 -0.14 16 5 O -0.17 -0.52 10.28 2.66 0.03 -0.49 16 6 C -0.02 -0.06 7.07 -36.91 -0.26 -0.32 16 7 C 0.60 1.96 7.77 -12.72 -0.10 1.86 16 8 O -0.50 -2.72 13.98 5.21 0.07 -2.64 16 9 N -0.63 -0.89 5.47 -11.14 -0.06 -0.96 16 10 C -0.01 -0.02 6.90 -83.91 -0.58 -0.60 16 11 C 0.02 0.01 11.43 -16.66 -0.19 -0.18 16 12 N -0.34 -0.48 3.02 -9.16 -0.03 -0.50 16 13 C -0.17 0.29 5.59 59.85 0.33 0.63 16 14 Si 1.02 -2.94 12.78 -169.99 -2.17 -5.11 16 15 C -0.45 0.92 8.65 101.05 0.87 1.79 16 16 C -0.45 1.24 8.65 101.05 0.87 2.11 16 17 C -0.45 0.02 8.65 101.05 0.87 0.90 16 18 N -0.28 -1.21 12.56 30.71 0.39 -0.83 16 19 C 0.05 0.22 10.84 -17.21 -0.19 0.03 16 20 C -0.10 -0.24 10.68 -37.23 -0.40 -0.64 16 21 C -0.08 -0.18 6.16 -105.21 -0.65 -0.83 16 22 C -0.10 -0.06 5.26 -104.63 -0.55 -0.61 16 23 C -0.08 0.04 2.70 36.00 0.10 0.13 16 24 O -0.53 -0.16 12.88 -35.23 -0.45 -0.62 16 25 Si 0.95 -1.17 25.50 -169.99 -4.33 -5.50 16 26 H -0.25 0.15 7.11 56.52 0.40 0.55 16 27 H -0.25 -0.10 7.11 56.52 0.40 0.31 16 28 H -0.25 0.43 6.74 56.52 0.38 0.82 16 29 C -0.10 0.06 8.62 -39.96 -0.34 -0.29 16 30 C -0.18 0.10 9.03 -39.38 -0.36 -0.26 16 31 H 0.06 -0.24 7.67 -51.93 -0.40 -0.64 16 32 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 33 H 0.06 -0.24 7.65 -51.93 -0.40 -0.64 16 34 H 0.42 -0.41 8.54 -40.82 -0.35 -0.76 16 35 H 0.18 -0.55 8.06 -52.48 -0.42 -0.98 16 36 H 0.10 -0.39 7.96 -51.93 -0.41 -0.80 16 37 H 0.11 -0.18 7.96 -51.93 -0.41 -0.59 16 38 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 40 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 41 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 42 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 43 H 0.07 -0.23 7.96 -51.93 -0.41 -0.65 16 44 H 0.07 0.14 7.96 -51.93 -0.41 -0.28 16 45 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 46 H 0.07 0.01 7.96 -51.93 -0.41 -0.40 16 47 H 0.21 1.00 5.91 -52.49 -0.31 0.69 16 48 H 0.18 0.28 8.06 -52.49 -0.42 -0.14 16 49 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 50 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 51 H 0.14 -0.33 4.84 -52.49 -0.25 -0.59 16 52 H 0.15 -0.48 6.26 -52.49 -0.33 -0.81 16 LS Contribution 439.17 15.07 6.62 6.62 Total: 0.00 -9.52 439.17 -6.95 -16.46 By element: Atomic # 1 Polarization: -3.63 SS G_CDS: -6.69 Total: -10.32 kcal Atomic # 6 Polarization: 4.58 SS G_CDS: -0.11 Total: 4.47 kcal Atomic # 7 Polarization: -2.58 SS G_CDS: 0.30 Total: -2.29 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -0.56 Total: -4.33 kcal Atomic # 14 Polarization: -4.11 SS G_CDS: -6.51 Total: -10.61 kcal Total LS contribution 6.62 Total: 6.62 kcal Total: -9.52 -6.95 -16.46 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_6672420.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.992 kcal (2) G-P(sol) polarization free energy of solvation -9.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.947 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.465 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds