Wall clock time and date at job start Sun Mar 7 2021 10:56:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38332 * 119.85175 * 2 1 4 4 C 1.37973 * 120.14760 * 180.25420 * 3 2 1 5 5 C 1.50699 * 120.07680 * 179.74483 * 4 3 2 6 6 C 1.39567 * 119.84978 * 359.50023 * 4 3 2 7 7 C 1.47825 * 120.14803 * 180.27191 * 6 4 3 8 8 O 1.21590 * 119.99675 * 6.41266 * 7 6 4 9 9 N 1.34777 * 120.00203 * 186.41586 * 7 6 4 10 10 C 1.40702 * 119.99978 * 180.02562 * 9 7 6 11 11 C 1.35772 * 126.08474 * 180.02562 * 10 9 7 12 12 N 1.35815 * 107.55986 * 179.97438 * 11 10 9 13 13 C 1.46501 * 126.05109 * 179.97438 * 12 11 10 14 14 Si 1.86301 * 109.47178 * 89.99966 * 13 12 11 15 15 C 1.86292 * 109.47094 * 60.00008 * 14 13 12 16 16 C 1.86305 * 109.47290 * 180.02562 * 14 13 12 17 17 C 1.86305 * 109.47064 * 300.00011 * 14 13 12 18 18 N 1.40065 * 107.89790 * 359.97438 * 12 11 10 19 19 C 1.30826 * 108.37130 * 359.75675 * 18 12 11 20 20 C 1.39601 * 119.70951 * 0.51974 * 6 4 3 21 21 C 1.37939 * 119.85394 * 359.73284 * 20 6 4 22 22 C 1.50694 * 119.93114 * 180.02562 * 21 20 6 23 23 O 1.42895 * 109.47020 * 254.97787 * 22 21 20 24 24 Si 1.86301 * 109.46791 * 14.97708 * 22 21 20 25 25 H 1.48501 * 109.47535 * 60.00135 * 24 22 21 26 26 H 1.48509 * 109.46879 * 180.02562 * 24 22 21 27 27 H 1.48496 * 109.47474 * 299.99856 * 24 22 21 28 28 H 1.09007 * 109.47187 * 90.00337 * 1 2 3 29 29 H 1.09003 * 109.46951 * 209.99649 * 1 2 3 30 30 H 1.09000 * 109.47299 * 329.99690 * 1 2 3 31 31 H 1.08006 * 119.92957 * 359.97438 * 3 2 1 32 32 H 1.08997 * 109.47272 * 96.80262 * 5 4 3 33 33 H 1.09007 * 109.47330 * 216.80360 * 5 4 3 34 34 H 1.08996 * 109.47187 * 336.80368 * 5 4 3 35 35 H 0.96992 * 119.99984 * 359.97438 * 9 7 6 36 36 H 1.08005 * 126.21709 * 359.95412 * 11 10 9 37 37 H 1.09003 * 109.47454 * 209.99846 * 13 12 11 38 38 H 1.08997 * 109.47517 * 330.00215 * 13 12 11 39 39 H 1.09004 * 109.47393 * 59.99964 * 15 14 13 40 40 H 1.09006 * 109.47708 * 180.02562 * 15 14 13 41 41 H 1.08997 * 109.47589 * 300.00183 * 15 14 13 42 42 H 1.08997 * 109.46810 * 60.00239 * 16 14 13 43 43 H 1.08997 * 109.46867 * 180.02562 * 16 14 13 44 44 H 1.08995 * 109.46707 * 300.00031 * 16 14 13 45 45 H 1.08997 * 109.46771 * 60.00336 * 17 14 13 46 46 H 1.08997 * 109.47010 * 179.97438 * 17 14 13 47 47 H 1.08991 * 109.47194 * 299.99895 * 17 14 13 48 48 H 1.08003 * 125.82888 * 180.25534 * 19 18 12 49 49 H 1.07997 * 120.07854 * 179.75219 * 20 6 4 50 50 H 1.09004 * 109.47025 * 134.97319 * 22 21 20 51 51 H 0.96699 * 114.00197 * 60.00091 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1956 1.1998 0.0000 4 6 3.5753 1.2069 -0.0053 5 6 4.3238 2.5149 -0.0111 6 6 4.2762 0.0000 -0.0001 7 6 5.7545 0.0000 0.0003 8 8 6.3623 1.0469 0.1138 9 7 6.4284 -1.1604 -0.1251 10 6 7.8354 -1.1604 -0.1241 11 6 8.6352 -2.2512 -0.2424 12 7 9.9229 -1.8222 -0.1953 13 6 11.1168 -2.6664 -0.2862 14 14 11.6237 -2.8353 -2.0709 15 6 11.9996 -1.1506 -2.7717 16 6 13.1415 -3.9095 -2.1865 17 6 10.2364 -3.6153 -3.0394 18 7 9.9075 -0.4298 -0.0446 19 6 8.6615 -0.0328 -0.0075 20 6 3.5752 -1.2072 -0.0006 21 6 2.1958 -1.2002 -0.0006 22 6 1.4373 -2.5024 -0.0005 23 8 0.8959 -2.7383 -1.3017 24 14 2.5911 -3.8929 0.4535 25 1 3.1538 -3.6478 1.8058 26 1 1.8437 -5.1763 0.4530 27 1 3.6953 -3.9634 -0.5368 28 1 -0.3634 -0.0001 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3634 0.8899 0.5139 31 1 1.6520 2.1331 -0.0004 32 1 4.6138 2.7721 1.0076 33 1 5.2161 2.4202 -0.6300 34 1 3.6829 3.2985 -0.4152 35 1 5.9435 -1.9955 -0.2153 36 1 8.3069 -3.2742 -0.3534 37 1 11.9285 -2.2101 0.2804 38 1 10.8969 -3.6521 0.1238 39 1 12.8113 -0.6942 -2.2051 40 1 12.2958 -1.2493 -3.8161 41 1 11.1114 -0.5224 -2.7042 42 1 12.9210 -4.8951 -1.7767 43 1 13.4382 -4.0079 -3.2307 44 1 13.9532 -3.4535 -1.6198 45 1 9.3482 -2.9871 -2.9718 46 1 10.5328 -3.7136 -4.0836 47 1 10.0164 -4.6009 -2.6294 48 1 8.3262 0.9885 0.0975 49 1 4.1116 -2.1446 -0.0006 50 1 0.6268 -2.4507 0.7265 51 1 1.5619 -2.7961 -2.0003 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:56:11 Heat of formation + Delta-G solvation = -1.918465 kcal Electronic energy + Delta-G solvation = -30189.674183 eV Core-core repulsion = 26214.350118 eV Total energy + Delta-G solvation = -3975.324065 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 361.173 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.32734 -41.42903 -39.88207 -37.71147 -36.03372 -34.42595 -33.83730 -33.19899 -30.54815 -29.71785 -29.20952 -28.63981 -28.52203 -28.42894 -26.85877 -25.61244 -23.85769 -23.19483 -22.37916 -21.36763 -20.70983 -18.98210 -18.39862 -17.53605 -17.23693 -16.67945 -16.56983 -16.45931 -16.22706 -15.87692 -15.76981 -15.19656 -15.00323 -14.65502 -14.56946 -14.48006 -14.35198 -14.31865 -14.12202 -13.96132 -13.81993 -13.79221 -13.60773 -13.42261 -13.39489 -13.25736 -13.17254 -13.11527 -12.78993 -12.72211 -12.58578 -12.23891 -12.12429 -11.98425 -11.79773 -11.63641 -11.32945 -11.04561 -10.93925 -10.54801 -10.49482 -10.00244 -9.91770 -9.66352 -8.54329 -0.26544 0.15257 0.80464 1.00232 1.23007 1.28847 1.38326 1.47306 1.64042 1.68523 1.77910 1.84752 2.18025 2.19677 2.40911 2.71832 3.33686 3.44606 3.49771 3.65395 3.70476 3.80234 3.88386 4.10031 4.15964 4.29170 4.41568 4.48239 4.51499 4.52531 4.55654 4.57739 4.60595 4.62238 4.66649 4.71159 4.73041 4.75402 4.76651 4.80065 4.88738 4.94604 5.03393 5.08033 5.17458 5.32112 5.37212 5.39350 5.47438 5.55776 5.57081 5.80446 5.94444 6.04750 6.38730 6.44122 6.83337 7.17353 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.020 4.020 3 C -0.131 4.131 4 C -0.005 4.005 5 C -0.124 4.124 6 C -0.142 4.142 7 C 0.562 3.438 8 O -0.516 6.516 9 N -0.641 5.641 10 C -0.003 4.003 11 C 0.013 3.987 12 N -0.343 5.343 13 C -0.169 4.169 14 Si 1.018 2.982 15 C -0.446 4.446 16 C -0.449 4.449 17 C -0.450 4.450 18 N -0.281 5.281 19 C 0.048 3.952 20 C -0.085 4.085 21 C -0.137 4.137 22 C -0.077 4.077 23 O -0.534 6.534 24 Si 0.937 3.063 25 H -0.246 1.246 26 H -0.248 1.248 27 H -0.252 1.252 28 H 0.082 0.918 29 H 0.074 0.926 30 H 0.069 0.931 31 H 0.134 0.866 32 H 0.079 0.921 33 H 0.097 0.903 34 H 0.061 0.939 35 H 0.406 0.594 36 H 0.175 0.825 37 H 0.105 0.895 38 H 0.098 0.902 39 H 0.071 0.929 40 H 0.069 0.931 41 H 0.071 0.929 42 H 0.071 0.929 43 H 0.075 0.925 44 H 0.072 0.928 45 H 0.070 0.930 46 H 0.074 0.926 47 H 0.069 0.931 48 H 0.206 0.794 49 H 0.122 0.878 50 H 0.120 0.880 51 H 0.376 0.624 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.339 -4.573 -1.110 4.893 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C -0.021 4.021 3 C -0.149 4.149 4 C -0.006 4.006 5 C -0.180 4.180 6 C -0.145 4.145 7 C 0.352 3.648 8 O -0.393 6.393 9 N -0.286 5.286 10 C -0.108 4.108 11 C -0.136 4.136 12 N -0.126 5.126 13 C -0.335 4.335 14 Si 1.213 2.787 15 C -0.554 4.554 16 C -0.558 4.558 17 C -0.558 4.558 18 N -0.104 5.104 19 C -0.138 4.138 20 C -0.104 4.104 21 C -0.138 4.138 22 C -0.188 4.188 23 O -0.339 6.339 24 Si 0.760 3.240 25 H -0.169 1.169 26 H -0.172 1.172 27 H -0.176 1.176 28 H 0.100 0.900 29 H 0.093 0.907 30 H 0.088 0.912 31 H 0.152 0.848 32 H 0.098 0.902 33 H 0.115 0.885 34 H 0.080 0.920 35 H 0.241 0.759 36 H 0.192 0.808 37 H 0.123 0.877 38 H 0.117 0.883 39 H 0.090 0.910 40 H 0.088 0.912 41 H 0.090 0.910 42 H 0.090 0.910 43 H 0.094 0.906 44 H 0.091 0.909 45 H 0.089 0.911 46 H 0.093 0.907 47 H 0.089 0.911 48 H 0.222 0.778 49 H 0.139 0.861 50 H 0.138 0.862 51 H 0.223 0.777 Dipole moment (debyes) X Y Z Total from point charges 0.390 -4.212 -0.365 4.246 hybrid contribution -0.937 -0.515 -0.280 1.106 sum -0.547 -4.728 -0.645 4.803 Atomic orbital electron populations 1.20937 0.90230 1.03198 1.03401 1.20002 0.96690 0.91881 0.93513 1.21052 0.93107 0.98147 1.02619 1.20092 0.93418 0.94810 0.92325 1.21134 1.00883 0.92026 1.04002 1.19450 0.91860 0.93826 1.09371 1.18194 0.87101 0.83008 0.76540 1.90643 1.69295 1.30651 1.48671 1.42692 1.03606 1.09982 1.72336 1.17639 0.83319 0.94016 1.15795 1.21862 0.84511 0.98883 1.08304 1.47967 1.04161 1.05159 1.55337 1.26956 0.88498 0.95591 1.22413 0.79390 0.67449 0.67994 0.63895 1.26064 1.05598 1.17321 1.06420 1.26094 1.14866 1.09651 1.05180 1.26127 1.13422 1.07070 1.09163 1.77458 1.20717 0.88930 1.23291 1.24483 0.88244 1.00604 1.00454 1.21140 0.93973 0.96968 0.98302 1.20000 0.92966 0.95947 1.04838 1.24922 1.04904 0.99365 0.89591 1.86533 1.36932 1.94483 1.15987 0.85875 0.78289 0.78503 0.81348 1.16929 1.17200 1.17560 0.89976 0.90699 0.91244 0.84794 0.90207 0.88504 0.92046 0.75856 0.80790 0.87668 0.88330 0.91016 0.91223 0.90979 0.90981 0.90565 0.90852 0.91121 0.90724 0.91138 0.77785 0.86079 0.86197 0.77685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.18 9.53 36.01 0.34 0.52 16 2 C -0.02 0.00 5.89 -104.53 -0.62 -0.61 16 3 C -0.13 -0.03 9.31 -39.64 -0.37 -0.40 16 4 C -0.01 -0.01 5.91 -104.22 -0.62 -0.62 16 5 C -0.12 -0.16 8.71 36.01 0.31 0.15 16 6 C -0.14 -0.20 5.87 -104.97 -0.62 -0.82 16 7 C 0.56 1.45 7.67 -12.34 -0.09 1.36 16 8 O -0.52 -2.41 10.51 5.29 0.06 -2.35 16 9 N -0.64 -0.60 5.42 -10.89 -0.06 -0.65 16 10 C 0.00 -0.01 6.90 -83.90 -0.58 -0.59 16 11 C 0.01 0.01 11.44 -16.67 -0.19 -0.19 16 12 N -0.34 -0.47 3.01 -9.16 -0.03 -0.49 16 13 C -0.17 0.29 5.59 59.85 0.33 0.63 16 14 Si 1.02 -2.99 12.79 -169.99 -2.17 -5.16 16 15 C -0.45 0.06 8.65 101.05 0.87 0.93 16 16 C -0.45 1.26 8.65 101.05 0.87 2.13 16 17 C -0.45 0.98 8.65 101.05 0.87 1.86 16 18 N -0.28 -1.21 12.56 30.71 0.39 -0.82 16 19 C 0.05 0.21 10.83 -17.22 -0.19 0.02 16 20 C -0.09 0.03 8.13 -39.18 -0.32 -0.29 16 21 C -0.14 0.07 5.26 -104.68 -0.55 -0.48 16 22 C -0.08 0.13 2.04 36.00 0.07 0.20 16 23 O -0.53 0.63 12.80 -35.23 -0.45 0.18 16 24 Si 0.94 -1.79 25.49 -169.99 -4.33 -6.12 16 25 H -0.25 0.25 7.11 56.52 0.40 0.66 16 26 H -0.25 0.09 7.11 56.52 0.40 0.49 16 27 H -0.25 0.71 6.73 56.52 0.38 1.09 16 28 H 0.08 -0.11 8.14 -51.92 -0.42 -0.53 16 29 H 0.07 -0.13 6.22 -51.93 -0.32 -0.46 16 30 H 0.07 -0.15 8.08 -51.93 -0.42 -0.57 16 31 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 32 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 33 H 0.10 0.27 5.90 -51.93 -0.31 -0.04 16 34 H 0.06 -0.01 8.04 -51.93 -0.42 -0.43 16 35 H 0.41 -0.76 6.90 -40.82 -0.28 -1.04 16 36 H 0.17 -0.56 8.06 -52.48 -0.42 -0.98 16 37 H 0.10 -0.17 7.96 -51.93 -0.41 -0.59 16 38 H 0.10 -0.38 7.96 -51.93 -0.41 -0.80 16 39 H 0.07 0.01 7.96 -51.93 -0.41 -0.41 16 40 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16 41 H 0.07 0.13 7.96 -51.93 -0.41 -0.28 16 42 H 0.07 -0.24 7.96 -51.93 -0.41 -0.65 16 43 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 44 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 45 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 46 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 47 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 48 H 0.21 0.98 5.91 -52.48 -0.31 0.67 16 49 H 0.12 -0.27 3.27 -52.49 -0.17 -0.45 16 50 H 0.12 -0.29 6.48 -51.93 -0.34 -0.62 16 51 H 0.38 -1.57 8.70 45.56 0.40 -1.17 16 LS Contribution 412.07 15.07 6.21 6.21 Total: 0.00 -7.70 412.07 -8.07 -15.77 By element: Atomic # 1 Polarization: -3.12 SS G_CDS: -7.23 Total: -10.35 kcal Atomic # 6 Polarization: 4.25 SS G_CDS: -0.45 Total: 3.80 kcal Atomic # 7 Polarization: -2.27 SS G_CDS: 0.30 Total: -1.97 kcal Atomic # 8 Polarization: -1.78 SS G_CDS: -0.40 Total: -2.17 kcal Atomic # 14 Polarization: -4.78 SS G_CDS: -6.51 Total: -11.28 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -7.70 -8.07 -15.77 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.847 kcal (2) G-P(sol) polarization free energy of solvation -7.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.766 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds