Wall clock time and date at job start Sun Mar 7 2021 10:56:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38332 * 119.85175 * 2 1 4 4 C 1.37973 * 120.14760 * 180.25420 * 3 2 1 5 5 C 1.50699 * 120.07680 * 179.74483 * 4 3 2 6 6 C 1.39567 * 119.84978 * 359.50023 * 4 3 2 7 7 C 1.47825 * 120.14803 * 180.27191 * 6 4 3 8 8 O 1.21590 * 119.99675 * 6.41266 * 7 6 4 9 9 N 1.34777 * 120.00203 * 186.41586 * 7 6 4 10 10 C 1.40702 * 119.99978 * 180.02562 * 9 7 6 11 11 C 1.35772 * 126.08474 * 180.02562 * 10 9 7 12 12 N 1.35815 * 107.55986 * 179.97438 * 11 10 9 13 13 C 1.46501 * 126.05109 * 179.97438 * 12 11 10 14 14 Si 1.86301 * 109.47178 * 89.99966 * 13 12 11 15 15 C 1.86292 * 109.47094 * 60.00008 * 14 13 12 16 16 C 1.86305 * 109.47290 * 180.02562 * 14 13 12 17 17 C 1.86305 * 109.47064 * 300.00011 * 14 13 12 18 18 N 1.40065 * 107.89790 * 359.97438 * 12 11 10 19 19 C 1.30826 * 108.37130 * 359.75675 * 18 12 11 20 20 C 1.39601 * 119.70951 * 0.51974 * 6 4 3 21 21 C 1.37939 * 119.85394 * 359.73284 * 20 6 4 22 22 C 1.50694 * 119.93114 * 180.02562 * 21 20 6 23 23 O 1.42895 * 109.47020 * 254.97787 * 22 21 20 24 24 Si 1.86301 * 109.46791 * 14.97708 * 22 21 20 25 25 H 1.48501 * 109.47535 * 60.00135 * 24 22 21 26 26 H 1.48509 * 109.46879 * 180.02562 * 24 22 21 27 27 H 1.48496 * 109.47474 * 299.99856 * 24 22 21 28 28 H 1.09007 * 109.47187 * 90.00337 * 1 2 3 29 29 H 1.09003 * 109.46951 * 209.99649 * 1 2 3 30 30 H 1.09000 * 109.47299 * 329.99690 * 1 2 3 31 31 H 1.08006 * 119.92957 * 359.97438 * 3 2 1 32 32 H 1.08997 * 109.47272 * 96.80262 * 5 4 3 33 33 H 1.09007 * 109.47330 * 216.80360 * 5 4 3 34 34 H 1.08996 * 109.47187 * 336.80368 * 5 4 3 35 35 H 0.96992 * 119.99984 * 359.97438 * 9 7 6 36 36 H 1.08005 * 126.21709 * 359.95412 * 11 10 9 37 37 H 1.09003 * 109.47454 * 209.99846 * 13 12 11 38 38 H 1.08997 * 109.47517 * 330.00215 * 13 12 11 39 39 H 1.09004 * 109.47393 * 59.99964 * 15 14 13 40 40 H 1.09006 * 109.47708 * 180.02562 * 15 14 13 41 41 H 1.08997 * 109.47589 * 300.00183 * 15 14 13 42 42 H 1.08997 * 109.46810 * 60.00239 * 16 14 13 43 43 H 1.08997 * 109.46867 * 180.02562 * 16 14 13 44 44 H 1.08995 * 109.46707 * 300.00031 * 16 14 13 45 45 H 1.08997 * 109.46771 * 60.00336 * 17 14 13 46 46 H 1.08997 * 109.47010 * 179.97438 * 17 14 13 47 47 H 1.08991 * 109.47194 * 299.99895 * 17 14 13 48 48 H 1.08003 * 125.82888 * 180.25534 * 19 18 12 49 49 H 1.07997 * 120.07854 * 179.75219 * 20 6 4 50 50 H 1.09004 * 109.47025 * 134.97319 * 22 21 20 51 51 H 0.96699 * 114.00197 * 60.00091 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1956 1.1998 0.0000 4 6 3.5753 1.2069 -0.0053 5 6 4.3238 2.5149 -0.0111 6 6 4.2762 0.0000 -0.0001 7 6 5.7545 0.0000 0.0003 8 8 6.3623 1.0469 0.1138 9 7 6.4284 -1.1604 -0.1251 10 6 7.8354 -1.1604 -0.1241 11 6 8.6352 -2.2512 -0.2424 12 7 9.9229 -1.8222 -0.1953 13 6 11.1168 -2.6664 -0.2862 14 14 11.6237 -2.8353 -2.0709 15 6 11.9996 -1.1506 -2.7717 16 6 13.1415 -3.9095 -2.1865 17 6 10.2364 -3.6153 -3.0394 18 7 9.9075 -0.4298 -0.0446 19 6 8.6615 -0.0328 -0.0075 20 6 3.5752 -1.2072 -0.0006 21 6 2.1958 -1.2002 -0.0006 22 6 1.4373 -2.5024 -0.0005 23 8 0.8959 -2.7383 -1.3017 24 14 2.5911 -3.8929 0.4535 25 1 3.1538 -3.6478 1.8058 26 1 1.8437 -5.1763 0.4530 27 1 3.6953 -3.9634 -0.5368 28 1 -0.3634 -0.0001 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3634 0.8899 0.5139 31 1 1.6520 2.1331 -0.0004 32 1 4.6138 2.7721 1.0076 33 1 5.2161 2.4202 -0.6300 34 1 3.6829 3.2985 -0.4152 35 1 5.9435 -1.9955 -0.2153 36 1 8.3069 -3.2742 -0.3534 37 1 11.9285 -2.2101 0.2804 38 1 10.8969 -3.6521 0.1238 39 1 12.8113 -0.6942 -2.2051 40 1 12.2958 -1.2493 -3.8161 41 1 11.1114 -0.5224 -2.7042 42 1 12.9210 -4.8951 -1.7767 43 1 13.4382 -4.0079 -3.2307 44 1 13.9532 -3.4535 -1.6198 45 1 9.3482 -2.9871 -2.9718 46 1 10.5328 -3.7136 -4.0836 47 1 10.0164 -4.6009 -2.6294 48 1 8.3262 0.9885 0.0975 49 1 4.1116 -2.1446 -0.0006 50 1 0.6268 -2.4507 0.7265 51 1 1.5619 -2.7961 -2.0003 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608520_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:56:10 Heat of formation + Delta-G solvation = 3.755498 kcal Electronic energy + Delta-G solvation = -30189.428141 eV Core-core repulsion = 26214.350118 eV Total energy + Delta-G solvation = -3975.078024 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 361.173 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.43839 -41.47168 -39.94410 -37.61480 -36.15741 -34.42025 -33.87295 -33.21847 -30.62187 -29.56626 -29.20337 -28.54643 -28.38684 -28.31536 -26.85033 -25.57848 -23.86921 -23.25754 -22.43673 -21.46176 -20.76095 -18.97596 -18.45042 -17.48754 -17.24072 -16.74430 -16.53381 -16.44194 -16.19139 -15.94817 -15.72313 -15.24613 -15.05291 -14.60916 -14.54967 -14.42466 -14.20386 -14.16436 -14.05137 -13.88159 -13.85463 -13.81517 -13.48427 -13.34030 -13.21946 -13.15467 -13.06346 -13.03601 -12.82364 -12.64354 -12.55763 -12.17998 -12.12164 -11.89350 -11.78013 -11.67405 -11.38806 -10.85977 -10.81890 -10.68321 -10.36345 -10.05344 -9.90804 -9.67935 -8.63493 -0.30044 0.16756 0.76927 1.16872 1.32806 1.40789 1.44796 1.54946 1.65754 1.85969 1.93540 1.97322 2.06813 2.18622 2.56462 2.67091 3.45001 3.48876 3.57457 3.73846 3.75468 3.83180 3.94999 4.14714 4.22568 4.25760 4.49621 4.54432 4.56239 4.63192 4.67248 4.68873 4.70557 4.71835 4.74078 4.79075 4.81719 4.82443 4.86024 4.87272 4.87464 4.91460 4.99717 5.08318 5.20322 5.32667 5.48725 5.50573 5.52166 5.59148 5.64526 5.75753 5.81609 6.05080 6.35186 6.67595 6.74133 7.08317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.026 4.026 3 C -0.135 4.135 4 C -0.023 4.023 5 C -0.119 4.119 6 C -0.154 4.154 7 C 0.554 3.446 8 O -0.546 6.546 9 N -0.630 5.630 10 C -0.024 4.024 11 C 0.030 3.970 12 N -0.339 5.339 13 C -0.190 4.190 14 Si 1.093 2.907 15 C -0.474 4.474 16 C -0.454 4.454 17 C -0.459 4.459 18 N -0.316 5.316 19 C 0.025 3.975 20 C -0.082 4.082 21 C -0.137 4.137 22 C -0.076 4.076 23 O -0.546 6.546 24 Si 0.960 3.040 25 H -0.258 1.258 26 H -0.271 1.271 27 H -0.232 1.232 28 H 0.082 0.918 29 H 0.079 0.921 30 H 0.077 0.923 31 H 0.147 0.853 32 H 0.070 0.930 33 H 0.077 0.923 34 H 0.074 0.926 35 H 0.420 0.580 36 H 0.219 0.781 37 H 0.103 0.897 38 H 0.132 0.868 39 H 0.062 0.938 40 H 0.069 0.931 41 H 0.046 0.954 42 H 0.085 0.915 43 H 0.074 0.926 44 H 0.072 0.928 45 H 0.059 0.941 46 H 0.072 0.928 47 H 0.088 0.912 48 H 0.187 0.813 49 H 0.141 0.859 50 H 0.126 0.874 51 H 0.389 0.611 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.855 -7.437 -1.249 7.766 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.026 4.026 3 C -0.153 4.153 4 C -0.024 4.024 5 C -0.175 4.175 6 C -0.157 4.157 7 C 0.345 3.655 8 O -0.425 6.425 9 N -0.276 5.276 10 C -0.129 4.129 11 C -0.119 4.119 12 N -0.121 5.121 13 C -0.354 4.354 14 Si 1.282 2.718 15 C -0.578 4.578 16 C -0.563 4.563 17 C -0.567 4.567 18 N -0.140 5.140 19 C -0.160 4.160 20 C -0.100 4.100 21 C -0.137 4.137 22 C -0.187 4.187 23 O -0.353 6.353 24 Si 0.783 3.217 25 H -0.182 1.182 26 H -0.196 1.196 27 H -0.155 1.155 28 H 0.100 0.900 29 H 0.098 0.902 30 H 0.096 0.904 31 H 0.165 0.835 32 H 0.089 0.911 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.258 0.742 36 H 0.235 0.765 37 H 0.122 0.878 38 H 0.150 0.850 39 H 0.082 0.918 40 H 0.088 0.912 41 H 0.065 0.935 42 H 0.104 0.896 43 H 0.093 0.907 44 H 0.091 0.909 45 H 0.078 0.922 46 H 0.091 0.909 47 H 0.107 0.893 48 H 0.203 0.797 49 H 0.158 0.842 50 H 0.144 0.856 51 H 0.238 0.762 Dipole moment (debyes) X Y Z Total from point charges -0.110 -7.051 -0.531 7.072 hybrid contribution -0.745 0.360 -0.262 0.868 sum -0.855 -6.691 -0.793 6.791 Atomic orbital electron populations 1.20962 0.89216 1.03894 1.03567 1.20244 0.97514 0.91875 0.92970 1.21211 0.92628 0.99074 1.02364 1.20198 0.94092 0.94739 0.93346 1.21025 1.00441 0.92897 1.03123 1.19474 0.91205 0.94639 1.10427 1.18488 0.87702 0.83061 0.76291 1.90639 1.69935 1.31807 1.50132 1.42563 1.03192 1.10184 1.71639 1.17786 0.83920 0.94014 1.17136 1.22516 0.83600 1.00095 1.05734 1.48274 1.05519 1.04375 1.53954 1.27412 0.87589 0.96482 1.23877 0.78282 0.66836 0.64677 0.61965 1.26495 1.04181 1.20230 1.06924 1.26132 1.14615 1.10307 1.05246 1.26226 1.13129 1.07983 1.09328 1.77386 1.20852 0.91025 1.24777 1.24335 0.89096 1.00787 1.01736 1.21296 0.94174 0.97009 0.97552 1.20192 0.92956 0.96472 1.04117 1.24983 1.05201 0.98747 0.89722 1.86508 1.37943 1.94399 1.16468 0.85562 0.78238 0.76814 0.81073 1.18201 1.19600 1.15455 0.89959 0.90200 0.90416 0.83510 0.91130 0.90401 0.90706 0.74182 0.76475 0.87820 0.85002 0.91842 0.91230 0.93511 0.89635 0.90696 0.90907 0.92158 0.90930 0.89304 0.79654 0.84217 0.85609 0.76233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.44 9.53 71.24 0.68 1.12 16 2 C -0.03 0.02 5.89 -19.81 -0.12 -0.10 16 3 C -0.13 -0.11 9.31 22.23 0.21 0.10 16 4 C -0.02 -0.09 5.91 -19.61 -0.12 -0.21 16 5 C -0.12 -0.58 8.71 71.24 0.62 0.04 16 6 C -0.15 -0.59 5.87 -20.09 -0.12 -0.70 16 7 C 0.55 3.83 7.67 86.78 0.67 4.49 16 8 O -0.55 -6.88 10.51 -4.00 -0.04 -6.92 16 9 N -0.63 -1.45 5.42 -306.64 -1.66 -3.11 16 10 C -0.02 -0.13 6.90 37.64 0.26 0.13 16 11 C 0.03 -0.01 11.44 83.50 0.96 0.94 16 12 N -0.34 -0.84 3.01 -182.91 -0.55 -1.39 16 13 C -0.19 0.92 5.59 127.77 0.71 1.63 16 14 Si 1.09 -7.39 12.79 68.60 0.88 -6.52 16 15 C -0.47 -0.67 8.65 113.37 0.98 0.31 16 16 C -0.45 3.34 8.65 113.37 0.98 4.32 16 17 C -0.46 2.78 8.65 113.37 0.98 3.77 16 18 N -0.32 -3.35 12.56 -56.76 -0.71 -4.07 16 19 C 0.03 0.29 10.83 85.34 0.92 1.21 16 20 C -0.08 0.08 8.13 22.53 0.18 0.27 16 21 C -0.14 0.22 5.26 -19.90 -0.10 0.12 16 22 C -0.08 0.33 2.04 71.23 0.15 0.48 16 23 O -0.55 1.92 12.80 -148.98 -1.91 0.01 16 24 Si 0.96 -4.84 25.49 68.60 1.75 -3.10 16 25 H -0.26 0.76 7.11 99.48 0.71 1.47 16 26 H -0.27 0.31 7.11 99.48 0.71 1.01 16 27 H -0.23 1.93 6.73 99.48 0.67 2.60 16 28 H 0.08 -0.28 8.14 -2.38 -0.02 -0.30 16 29 H 0.08 -0.36 6.22 -2.39 -0.01 -0.38 16 30 H 0.08 -0.41 8.08 -2.39 -0.02 -0.43 16 31 H 0.15 -0.39 8.06 -2.91 -0.02 -0.41 16 32 H 0.07 0.43 8.14 -2.39 -0.02 0.41 16 33 H 0.08 0.69 5.90 -2.38 -0.01 0.68 16 34 H 0.07 0.09 8.04 -2.39 -0.02 0.07 16 35 H 0.42 -1.98 6.90 -92.71 -0.64 -2.62 16 36 H 0.22 -2.20 8.06 -2.91 -0.02 -2.23 16 37 H 0.10 -0.41 7.96 -2.39 -0.02 -0.43 16 38 H 0.13 -1.48 7.96 -2.39 -0.02 -1.50 16 39 H 0.06 0.15 7.96 -2.39 -0.02 0.13 16 40 H 0.07 0.04 7.96 -2.38 -0.02 0.02 16 41 H 0.05 0.30 7.96 -2.39 -0.02 0.28 16 42 H 0.08 -0.81 7.96 -2.39 -0.02 -0.83 16 43 H 0.07 -0.48 7.96 -2.39 -0.02 -0.50 16 44 H 0.07 -0.49 7.96 -2.39 -0.02 -0.51 16 45 H 0.06 -0.20 7.96 -2.39 -0.02 -0.22 16 46 H 0.07 -0.37 7.96 -2.39 -0.02 -0.39 16 47 H 0.09 -0.83 7.96 -2.39 -0.02 -0.85 16 48 H 0.19 2.62 5.91 -2.91 -0.02 2.60 16 49 H 0.14 -0.82 3.27 -2.91 -0.01 -0.83 16 50 H 0.13 -0.72 6.48 -2.38 -0.02 -0.74 16 51 H 0.39 -3.75 8.70 -74.06 -0.64 -4.39 16 Total: 0.00 -21.43 412.07 5.99 -15.45 By element: Atomic # 1 Polarization: -8.66 SS G_CDS: 0.40 Total: -8.26 kcal Atomic # 6 Polarization: 10.06 SS G_CDS: 7.84 Total: 17.90 kcal Atomic # 7 Polarization: -5.64 SS G_CDS: -2.93 Total: -8.56 kcal Atomic # 8 Polarization: -4.96 SS G_CDS: -1.95 Total: -6.91 kcal Atomic # 14 Polarization: -12.24 SS G_CDS: 2.63 Total: -9.61 kcal Total: -21.43 5.99 -15.45 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.202 kcal (2) G-P(sol) polarization free energy of solvation -21.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.446 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds