Wall clock time and date at job start Sun Mar 7 2021 10:56:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86306 * 1 3 3 C 1.86295 * 109.47424 * 2 1 4 4 C 1.86306 * 109.46892 * 239.99968 * 2 1 3 5 5 C 1.86298 * 109.46852 * 120.00204 * 2 1 3 6 6 N 1.46500 * 109.47226 * 59.99929 * 5 2 1 7 7 C 1.35811 * 126.05578 * 270.33253 * 6 5 2 8 8 C 1.35751 * 107.56900 * 180.15908 * 7 6 5 9 9 N 1.40759 * 126.08316 * 179.84573 * 8 7 6 10 10 C 1.34784 * 119.99856 * 179.71495 * 9 8 7 11 11 O 1.21301 * 119.99877 * 359.97438 * 10 9 8 12 12 C 1.50700 * 119.99961 * 179.97438 * 10 9 8 13 13 N 1.46497 * 109.47128 * 180.02562 * 12 10 9 14 14 C 1.36836 * 125.05704 * 265.02374 * 13 12 10 15 15 C 1.34242 * 109.93245 * 179.97438 * 14 13 12 16 16 C 1.50696 * 126.49680 * 180.02562 * 15 14 13 17 17 O 1.42908 * 109.47115 * 104.97425 * 16 15 14 18 18 Si 1.86298 * 109.47276 * 344.97502 * 16 15 14 19 19 H 1.48500 * 109.47040 * 59.99984 * 18 16 15 20 20 H 1.48503 * 109.47193 * 180.02562 * 18 16 15 21 21 H 1.48503 * 109.47330 * 299.99794 * 18 16 15 22 22 C 1.46484 * 107.00126 * 359.97438 * 15 14 13 23 23 C 1.39595 * 134.04035 * 180.02562 * 22 15 14 24 24 C 1.36661 * 119.76771 * 179.97438 * 23 22 15 25 25 C 1.38790 * 120.52935 * 359.97438 * 24 23 22 26 26 C 1.37793 * 120.66229 * 0.02562 * 25 24 23 27 27 C 1.37691 * 125.06348 * 84.72226 * 13 12 10 28 28 C 1.40264 * 107.83584 * 359.57712 * 8 7 6 29 29 N 1.30830 * 108.32962 * 0.26572 * 28 8 7 30 30 H 1.09001 * 109.46526 * 300.00338 * 1 2 3 31 31 H 1.09002 * 109.46546 * 59.99435 * 1 2 3 32 32 H 1.08993 * 109.47270 * 179.97438 * 1 2 3 33 33 H 1.09002 * 109.47098 * 179.97438 * 3 2 1 34 34 H 1.08997 * 109.47066 * 300.00131 * 3 2 1 35 35 H 1.09000 * 109.46815 * 60.00141 * 3 2 1 36 36 H 1.08997 * 109.46828 * 300.00374 * 4 2 1 37 37 H 1.08997 * 109.47132 * 60.00154 * 4 2 1 38 38 H 1.09002 * 109.46901 * 180.02562 * 4 2 1 39 39 H 1.09000 * 109.47359 * 299.99842 * 5 2 1 40 40 H 1.09002 * 109.47170 * 179.97438 * 5 2 1 41 41 H 1.08007 * 126.21904 * 359.97438 * 7 6 5 42 42 H 0.96995 * 120.00073 * 359.97438 * 9 8 7 43 43 H 1.09004 * 109.46932 * 300.00223 * 12 10 9 44 44 H 1.08997 * 109.47392 * 59.99562 * 12 10 9 45 45 H 1.07993 * 125.03410 * 359.95892 * 14 13 12 46 46 H 1.09004 * 109.47445 * 224.97037 * 16 15 14 47 47 H 0.96702 * 113.99476 * 299.99864 * 17 16 15 48 48 H 1.08003 * 120.11624 * 359.97438 * 23 22 15 49 49 H 1.08000 * 119.73686 * 180.02562 * 24 23 22 50 50 H 1.07998 * 119.66740 * 180.02562 * 25 24 23 51 51 H 1.08005 * 120.10690 * 180.02562 * 26 25 24 52 52 H 1.08000 * 125.83087 * 180.22546 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5212 5 6 2.4840 -0.8783 1.5211 6 7 1.9956 -2.2595 1.5211 7 6 0.8297 -2.6951 2.0645 8 6 0.7548 -4.0342 1.8545 9 7 -0.2940 -4.8799 2.2621 10 6 -0.2447 -6.1975 1.9825 11 8 0.7033 -6.6543 1.3792 12 6 -1.3673 -7.1030 2.4194 13 7 -1.0784 -8.4764 1.9994 14 6 -1.5324 -9.0579 0.8470 15 6 -1.0860 -10.3213 0.7652 16 6 -1.3611 -11.2988 -0.3482 17 8 -0.1953 -11.4324 -1.1638 18 14 -2.7770 -10.6754 -1.3862 19 1 -2.4230 -9.3540 -1.9639 20 1 -3.0486 -11.6391 -2.4830 21 1 -3.9886 -10.5367 -0.5387 22 6 -0.2796 -10.5690 1.9627 23 6 0.4351 -11.6686 2.4411 24 6 1.1040 -11.5783 3.6293 25 6 1.0792 -10.4015 4.3647 26 6 0.3801 -9.3041 3.9112 27 6 -0.3047 -9.3724 2.7027 28 6 1.9055 -4.4242 1.1537 29 7 2.6456 -3.3637 0.9553 30 1 -0.3632 0.5139 0.8900 31 1 -0.3632 0.5139 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 3.5742 1.7563 0.0005 34 1 2.1208 2.2702 -0.8899 35 1 2.1208 2.2702 0.8900 36 1 2.1206 -1.9059 -1.5212 37 1 2.1207 -0.3644 -2.4111 38 1 3.5740 -0.8787 -1.5210 39 1 2.1207 -0.3645 2.4111 40 1 3.5740 -0.8787 1.5209 41 1 0.0967 -2.0871 2.5740 42 1 -1.0540 -4.5138 2.7409 43 1 -1.4613 -7.0674 3.5047 44 1 -2.3000 -6.7717 1.9629 45 1 -2.1576 -8.5726 0.1123 46 1 -1.6209 -12.2688 0.0758 47 1 0.0941 -10.6062 -1.5745 48 1 0.4593 -12.5875 1.8741 49 1 1.6572 -12.4291 3.9987 50 1 1.6131 -10.3453 5.3018 51 1 0.3671 -8.3926 4.4906 52 1 2.1407 -5.4284 0.8334 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:56:25 Heat of formation + Delta-G solvation = 47.246428 kcal Electronic energy + Delta-G solvation = -32976.254659 eV Core-core repulsion = 28681.184351 eV Total energy + Delta-G solvation = -4295.070307 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 386.169 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.56935 -42.18945 -40.40511 -37.97419 -37.51661 -35.93508 -34.16099 -33.60489 -31.51528 -30.50101 -30.10624 -29.74982 -28.89896 -28.60403 -28.48117 -26.97733 -25.64011 -23.72773 -23.11491 -22.46897 -22.00644 -21.12454 -20.55747 -18.79379 -18.31145 -18.24234 -17.66178 -17.21415 -16.67381 -16.61618 -16.31590 -16.13409 -15.94422 -15.59074 -15.42669 -15.09511 -14.69530 -14.62466 -14.45541 -14.43232 -14.36336 -14.32766 -14.19162 -14.00347 -13.84843 -13.65807 -13.59857 -13.45966 -13.38556 -13.29828 -13.21388 -12.57840 -12.41487 -12.28623 -12.22567 -12.08202 -11.81881 -11.70207 -11.58448 -11.41792 -11.08955 -11.04304 -10.97712 -10.40161 -10.18305 -10.07139 -9.00475 -8.65968 -8.51443 0.29649 0.67022 0.80944 1.16853 1.25051 1.26147 1.46028 1.48306 1.49547 1.58438 1.63566 1.72986 1.85584 1.98574 2.09042 2.18310 2.36580 3.14121 3.40774 3.47874 3.63879 3.66468 3.76586 3.79093 3.82263 3.87154 4.10944 4.21447 4.34039 4.39602 4.43630 4.51548 4.53921 4.56453 4.57313 4.59857 4.62023 4.69019 4.72942 4.75069 4.75978 4.82823 4.92709 5.01729 5.06479 5.28055 5.28428 5.35043 5.53311 5.67186 5.82926 5.85471 5.88643 5.92566 5.96889 6.15966 6.31193 6.38299 6.75081 6.77736 7.00326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.019 2.981 3 C -0.450 4.450 4 C -0.447 4.447 5 C -0.169 4.169 6 N -0.343 5.343 7 C 0.016 3.984 8 C -0.007 4.007 9 N -0.640 5.640 10 C 0.490 3.510 11 O -0.502 6.502 12 C 0.096 3.904 13 N -0.466 5.466 14 C 0.059 3.941 15 C -0.195 4.195 16 C -0.043 4.043 17 O -0.540 6.540 18 Si 0.945 3.055 19 H -0.254 1.254 20 H -0.251 1.251 21 H -0.250 1.250 22 C -0.084 4.084 23 C -0.064 4.064 24 C -0.146 4.146 25 C -0.096 4.096 26 C -0.128 4.128 27 C 0.109 3.891 28 C 0.048 3.952 29 N -0.281 5.281 30 H 0.070 0.930 31 H 0.074 0.926 32 H 0.069 0.931 33 H 0.073 0.927 34 H 0.075 0.925 35 H 0.071 0.929 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.071 0.929 39 H 0.099 0.901 40 H 0.105 0.895 41 H 0.176 0.824 42 H 0.411 0.589 43 H 0.120 0.880 44 H 0.124 0.876 45 H 0.166 0.834 46 H 0.113 0.887 47 H 0.375 0.625 48 H 0.124 0.876 49 H 0.123 0.877 50 H 0.124 0.876 51 H 0.114 0.886 52 H 0.203 0.797 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.376 6.563 2.957 8.984 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.213 2.787 3 C -0.558 4.558 4 C -0.555 4.555 5 C -0.335 4.335 6 N -0.125 5.125 7 C -0.132 4.132 8 C -0.111 4.111 9 N -0.287 5.287 10 C 0.275 3.725 11 O -0.375 6.375 12 C -0.030 4.030 13 N -0.149 5.149 14 C -0.065 4.065 15 C -0.202 4.202 16 C -0.154 4.154 17 O -0.345 6.345 18 Si 0.767 3.233 19 H -0.177 1.177 20 H -0.174 1.174 21 H -0.174 1.174 22 C -0.088 4.088 23 C -0.082 4.082 24 C -0.165 4.165 25 C -0.115 4.115 26 C -0.149 4.149 27 C 0.005 3.995 28 C -0.138 4.138 29 N -0.103 5.103 30 H 0.089 0.911 31 H 0.093 0.907 32 H 0.088 0.912 33 H 0.092 0.908 34 H 0.095 0.905 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.088 0.912 38 H 0.090 0.910 39 H 0.117 0.883 40 H 0.124 0.876 41 H 0.193 0.807 42 H 0.246 0.754 43 H 0.138 0.862 44 H 0.142 0.858 45 H 0.183 0.817 46 H 0.131 0.869 47 H 0.222 0.778 48 H 0.142 0.858 49 H 0.141 0.859 50 H 0.142 0.858 51 H 0.132 0.868 52 H 0.219 0.781 Dipole moment (debyes) X Y Z Total from point charges -4.387 6.733 1.837 8.243 hybrid contribution -0.725 0.595 1.001 1.372 sum -5.112 7.328 2.839 9.375 Atomic orbital electron populations 1.26123 1.20208 1.04616 1.04780 0.79380 0.67526 0.66183 0.65565 1.26095 1.06660 1.18090 1.04974 1.26071 1.06529 1.08249 1.14607 1.26973 1.06777 0.82005 1.17771 1.47996 1.14646 1.07012 1.42883 1.21873 0.92869 0.93947 1.04526 1.17627 0.93786 0.89483 1.10245 1.42684 1.21809 1.06741 1.57427 1.21055 0.88823 0.82147 0.80470 1.90699 1.33586 1.74464 1.38766 1.21510 0.97644 0.80437 1.03445 1.43163 1.43764 1.09127 1.18887 1.21546 1.01747 0.93569 0.89644 1.20640 1.05840 0.95252 0.98491 1.24252 0.96555 1.01842 0.92752 1.86507 1.45735 1.36862 1.65364 0.85839 0.77283 0.80394 0.79801 1.17746 1.17425 1.17390 1.18908 1.01422 0.93644 0.94840 1.20318 0.95278 0.97235 0.95409 1.20675 1.01808 0.98264 0.95725 1.20827 0.98455 0.92507 0.99732 1.19950 1.00838 0.99566 0.94501 1.18161 0.96951 0.89362 0.95011 1.24454 0.91487 0.99246 0.98659 1.77482 1.20533 0.92254 1.20058 0.91105 0.90710 0.91174 0.90830 0.90544 0.90964 0.91049 0.91196 0.90997 0.88263 0.87631 0.80668 0.75442 0.86165 0.85776 0.81734 0.86876 0.77817 0.85777 0.85928 0.85774 0.86763 0.78055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.26 8.65 101.05 0.87 2.14 16 2 Si 1.02 -3.44 12.78 -169.99 -2.17 -5.61 16 3 C -0.45 1.41 8.65 101.05 0.87 2.28 16 4 C -0.45 0.18 8.65 101.05 0.87 1.06 16 5 C -0.17 0.37 5.59 59.85 0.33 0.71 16 6 N -0.34 -0.25 3.02 -9.17 -0.03 -0.28 16 7 C 0.02 -0.01 11.43 -16.68 -0.19 -0.20 16 8 C -0.01 -0.01 6.90 -83.88 -0.58 -0.59 16 9 N -0.64 1.17 5.47 -10.03 -0.05 1.11 16 10 C 0.49 0.05 7.87 -10.98 -0.09 -0.03 16 11 O -0.50 -2.32 13.57 5.54 0.08 -2.25 16 12 C 0.10 -0.26 6.48 -5.20 -0.03 -0.29 16 13 N -0.47 -0.56 2.27 -115.71 -0.26 -0.82 16 14 C 0.06 0.07 9.89 -16.73 -0.17 -0.10 16 15 C -0.19 -0.47 5.57 -102.71 -0.57 -1.04 16 16 C -0.04 -0.05 3.06 36.00 0.11 0.06 16 17 O -0.54 -1.25 12.88 -35.23 -0.45 -1.71 16 18 Si 0.94 -0.15 26.08 -169.99 -4.43 -4.58 16 19 H -0.25 0.07 7.03 56.52 0.40 0.47 16 20 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 21 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 22 C -0.08 -0.34 6.35 -105.14 -0.67 -1.01 16 23 C -0.06 -0.22 10.05 -39.65 -0.40 -0.62 16 24 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 25 C -0.10 -0.22 10.01 -39.54 -0.40 -0.61 16 26 C -0.13 -0.33 10.00 -39.43 -0.39 -0.72 16 27 C 0.11 0.37 6.80 -83.99 -0.57 -0.21 16 28 C 0.05 0.19 10.84 -17.22 -0.19 0.00 16 29 N -0.28 -1.13 12.56 30.71 0.39 -0.74 16 30 H 0.07 -0.26 7.96 -51.93 -0.41 -0.68 16 31 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 32 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 33 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 34 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 35 H 0.07 -0.26 7.96 -51.93 -0.41 -0.68 16 36 H 0.07 0.11 7.96 -51.93 -0.41 -0.30 16 37 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 38 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 39 H 0.10 -0.44 7.96 -51.93 -0.41 -0.85 16 40 H 0.11 -0.21 7.96 -51.93 -0.41 -0.62 16 41 H 0.18 -0.79 8.06 -52.48 -0.42 -1.21 16 42 H 0.41 -2.39 8.83 -40.82 -0.36 -2.75 16 43 H 0.12 -0.59 8.14 -51.93 -0.42 -1.02 16 44 H 0.12 -0.75 8.12 -51.93 -0.42 -1.17 16 45 H 0.17 -0.25 6.29 -52.49 -0.33 -0.58 16 46 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 47 H 0.37 -0.16 8.70 45.56 0.40 0.24 16 48 H 0.12 0.30 8.06 -52.48 -0.42 -0.12 16 49 H 0.12 0.09 8.06 -52.49 -0.42 -0.34 16 50 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 51 H 0.11 0.08 8.06 -52.48 -0.42 -0.34 16 52 H 0.20 1.05 5.92 -52.49 -0.31 0.74 16 LS Contribution 438.50 15.07 6.61 6.61 Total: 0.00 -11.78 438.50 -9.23 -21.02 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -7.33 Total: -12.80 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -1.57 Total: 0.05 kcal Atomic # 7 Polarization: -0.77 SS G_CDS: 0.04 Total: -0.73 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.38 Total: -3.95 kcal Atomic # 14 Polarization: -3.59 SS G_CDS: -6.61 Total: -10.20 kcal Total LS contribution 6.61 Total: 6.61 kcal Total: -11.78 -9.23 -21.02 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.265 kcal (2) G-P(sol) polarization free energy of solvation -11.784 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.480 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.018 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds