Wall clock time and date at job start Sun Mar 7 2021 10:56:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36772 * 125.80265 * 2 1 4 4 C 1.47264 * 126.94089 * 0.02562 * 3 2 1 5 5 O 1.21656 * 119.99906 * 0.02562 * 4 3 2 6 6 N 1.34770 * 119.99996 * 179.97438 * 4 3 2 7 7 C 1.40741 * 120.00087 * 180.02562 * 6 4 3 8 8 C 1.35758 * 126.08007 * 180.02562 * 7 6 4 9 9 N 1.35838 * 107.55893 * 179.97438 * 8 7 6 10 10 C 1.46502 * 126.05705 * 179.97438 * 9 8 7 11 11 Si 1.86302 * 109.46872 * 89.99905 * 10 9 8 12 12 C 1.86297 * 109.47115 * 60.00738 * 11 10 9 13 13 C 1.86306 * 109.46889 * 180.02562 * 11 10 9 14 14 C 1.86298 * 109.47395 * 300.00058 * 11 10 9 15 15 N 1.40066 * 107.89024 * 359.97438 * 9 8 7 16 16 C 1.30830 * 108.37197 * 359.71925 * 15 9 8 17 17 C 1.46684 * 106.11582 * 179.97438 * 3 2 1 18 18 C 1.34487 * 106.33575 * 0.02562 * 17 3 2 19 19 C 1.50705 * 125.57030 * 179.97438 * 18 17 3 20 20 O 1.42896 * 109.47096 * 119.97771 * 19 18 17 21 21 Si 1.86300 * 109.46761 * 359.97438 * 19 18 17 22 22 H 1.48497 * 109.47434 * 59.99885 * 21 19 18 23 23 H 1.48503 * 109.47132 * 180.02562 * 21 19 18 24 24 H 1.48501 * 109.47155 * 299.99765 * 21 19 18 25 25 N 1.34678 * 125.80348 * 179.69304 * 2 1 3 26 26 H 1.09002 * 109.47152 * 89.99795 * 1 2 3 27 27 H 1.09001 * 109.46980 * 329.99895 * 1 2 3 28 28 H 1.09004 * 109.47113 * 209.99876 * 1 2 3 29 29 H 0.97007 * 120.00159 * 0.02562 * 6 4 3 30 30 H 1.07997 * 126.22403 * 359.97416 * 8 7 6 31 31 H 1.08994 * 109.47551 * 210.00218 * 10 9 8 32 32 H 1.09005 * 109.46974 * 330.00350 * 10 9 8 33 33 H 1.08998 * 109.47528 * 59.99297 * 12 11 10 34 34 H 1.09001 * 109.47204 * 180.02562 * 12 11 10 35 35 H 1.09010 * 109.46769 * 299.99774 * 12 11 10 36 36 H 1.09005 * 109.47014 * 60.00410 * 13 11 10 37 37 H 1.08993 * 109.46841 * 179.97438 * 13 11 10 38 38 H 1.08994 * 109.47494 * 300.00288 * 13 11 10 39 39 H 1.09003 * 109.46426 * 60.00168 * 14 11 10 40 40 H 1.09002 * 109.47066 * 179.97438 * 14 11 10 41 41 H 1.08999 * 109.47264 * 300.00543 * 14 11 10 42 42 H 1.08001 * 125.83426 * 180.29780 * 16 15 9 43 43 H 1.08001 * 126.82789 * 179.97438 * 17 3 2 44 44 H 1.09007 * 109.47062 * 239.97848 * 19 18 17 45 45 H 0.96702 * 113.99865 * 180.02562 * 20 19 18 46 46 H 0.96998 * 124.84882 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8703 2.5156 0.0005 5 8 0.6837 2.7840 0.0015 6 7 2.7850 3.5054 0.0010 7 6 2.3675 4.8494 0.0020 8 6 3.1781 5.9384 0.0021 9 7 2.3840 7.0405 0.0027 10 6 2.8408 8.4325 0.0035 11 14 3.0344 9.0234 -1.7527 12 6 1.3955 8.9083 -2.6310 13 6 3.6160 10.7934 -1.7517 14 6 4.2861 7.9596 -2.6315 15 7 1.0510 6.6103 0.0024 16 6 1.0399 5.3020 -0.0044 17 6 3.6882 0.6151 0.0006 18 6 3.6096 -0.7274 0.0004 19 6 4.7821 -1.6743 0.0003 20 8 4.7297 -2.4974 1.1671 21 14 6.3687 -0.6978 -0.0002 22 1 6.4237 0.1581 1.2121 23 1 7.5241 -1.6307 -0.0009 24 1 6.4231 0.1576 -1.2129 25 7 2.2949 -1.0923 0.0059 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 0.8900 0.5139 28 1 -0.3633 -0.8900 0.5138 29 1 3.7312 3.2914 0.0006 30 1 4.2581 5.9301 0.0017 31 1 2.1085 9.0549 0.5176 32 1 3.7997 8.4999 0.5173 33 1 0.6632 9.5307 -2.1168 34 1 1.5089 9.2536 -3.6586 35 1 1.0556 7.8725 -2.6315 36 1 4.5751 10.8604 -1.2380 37 1 3.7298 11.1389 -2.7791 38 1 2.8841 11.4161 -1.2374 39 1 3.9462 6.9240 -2.6320 40 1 4.3991 8.3051 -3.6591 41 1 5.2450 8.0270 -2.1176 42 1 0.1590 4.6772 -0.0109 43 1 4.5890 1.2110 0.0004 44 1 4.7418 -2.3024 -0.8897 45 1 5.4560 -3.1325 1.2334 46 1 1.9736 -2.0074 0.0104 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608520_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:56:41 Heat of formation + Delta-G solvation = 13.344784 kcal Electronic energy + Delta-G solvation = -26455.957672 eV Core-core repulsion = 22699.633319 eV Total energy + Delta-G solvation = -3756.324353 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 336.153 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.47191 -41.96694 -39.78459 -37.84338 -35.60966 -33.56163 -32.96768 -32.13497 -30.18191 -29.62836 -29.05514 -28.51905 -28.38232 -26.99655 -25.43972 -23.63191 -22.28156 -21.73877 -21.20208 -20.09726 -18.67835 -18.35117 -18.13737 -16.86512 -16.57757 -16.42719 -16.26913 -15.84867 -15.28490 -15.18436 -14.92982 -14.84229 -14.53764 -14.27235 -14.25090 -14.11322 -13.96887 -13.85360 -13.82700 -13.63426 -13.43830 -13.39002 -13.36048 -13.18621 -13.10684 -12.99397 -12.53662 -12.11336 -12.02415 -12.00450 -11.50717 -11.17529 -10.97974 -10.87259 -10.67698 -10.55641 -9.89642 -9.86624 -9.15041 -8.35125 0.68476 0.92012 1.02509 1.19370 1.34486 1.42843 1.46035 1.59198 1.74416 1.79817 1.95250 2.07274 2.18126 2.47863 2.59472 2.82261 3.17108 3.72086 3.80549 3.87831 3.95961 4.05982 4.13818 4.26625 4.42341 4.52740 4.56505 4.61307 4.63383 4.67060 4.68333 4.69382 4.74249 4.82776 4.84641 4.85952 4.90677 5.03039 5.23624 5.37594 5.44420 5.45758 5.63301 5.67673 5.91376 6.10769 6.20866 6.34747 6.43282 6.68358 6.98927 7.49198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.125 3.875 3 C -0.233 4.233 4 C 0.597 3.403 5 O -0.536 6.536 6 N -0.641 5.641 7 C 0.003 3.997 8 C 0.008 3.992 9 N -0.346 5.346 10 C -0.167 4.167 11 Si 1.018 2.982 12 C -0.446 4.446 13 C -0.450 4.450 14 C -0.450 4.450 15 N -0.284 5.284 16 C 0.047 3.953 17 C -0.165 4.165 18 C 0.034 3.966 19 C -0.064 4.064 20 O -0.549 6.549 21 Si 0.967 3.033 22 H -0.244 1.244 23 H -0.254 1.254 24 H -0.246 1.246 25 N -0.533 5.533 26 H 0.082 0.918 27 H 0.105 0.895 28 H 0.066 0.934 29 H 0.408 0.592 30 H 0.174 0.826 31 H 0.103 0.897 32 H 0.097 0.903 33 H 0.070 0.930 34 H 0.068 0.932 35 H 0.071 0.929 36 H 0.071 0.929 37 H 0.075 0.925 38 H 0.072 0.928 39 H 0.070 0.930 40 H 0.073 0.927 41 H 0.069 0.931 42 H 0.206 0.794 43 H 0.145 0.855 44 H 0.077 0.923 45 H 0.384 0.616 46 H 0.420 0.580 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.983 -2.429 -1.617 6.657 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.006 3.994 3 C -0.243 4.243 4 C 0.388 3.612 5 O -0.415 6.415 6 N -0.285 5.285 7 C -0.101 4.101 8 C -0.140 4.140 9 N -0.129 5.129 10 C -0.333 4.333 11 Si 1.212 2.788 12 C -0.554 4.554 13 C -0.558 4.558 14 C -0.557 4.557 15 N -0.107 5.107 16 C -0.139 4.139 17 C -0.190 4.190 18 C -0.076 4.076 19 C -0.174 4.174 20 O -0.356 6.356 21 Si 0.786 3.214 22 H -0.166 1.166 23 H -0.178 1.178 24 H -0.169 1.169 25 N -0.129 5.129 26 H 0.100 0.900 27 H 0.123 0.877 28 H 0.085 0.915 29 H 0.243 0.757 30 H 0.191 0.809 31 H 0.122 0.878 32 H 0.116 0.884 33 H 0.089 0.911 34 H 0.087 0.913 35 H 0.091 0.909 36 H 0.090 0.910 37 H 0.094 0.906 38 H 0.091 0.909 39 H 0.090 0.910 40 H 0.092 0.908 41 H 0.088 0.912 42 H 0.222 0.778 43 H 0.163 0.837 44 H 0.095 0.905 45 H 0.232 0.768 46 H 0.258 0.742 Dipole moment (debyes) X Y Z Total from point charges 4.702 -0.413 -1.433 4.933 hybrid contribution 1.141 -2.034 0.047 2.333 sum 5.844 -2.447 -1.386 6.486 Atomic orbital electron populations 1.20658 0.86425 1.04667 1.03879 1.20413 0.93874 0.85218 0.99901 1.19755 0.92569 0.91592 1.20346 1.17218 0.84939 0.83684 0.75388 1.90636 1.16577 1.83670 1.50579 1.42549 1.10019 1.02518 1.73373 1.17665 0.93359 0.83884 1.15204 1.21836 0.97356 0.85850 1.08940 1.47930 1.03775 1.04820 1.56420 1.26913 1.03450 0.81155 1.21790 0.79394 0.68073 0.66965 0.64352 1.26063 1.16576 1.05134 1.07609 1.26098 1.06161 1.18495 1.05033 1.26123 1.11339 1.09977 1.08304 1.77431 0.96654 1.12677 1.23926 1.24492 0.97740 0.91177 1.00522 1.21673 0.96208 0.92513 1.08578 1.19474 0.83835 0.93486 1.10767 1.24491 1.04635 0.97405 0.90836 1.86497 1.53444 1.53333 1.42297 0.85431 0.73801 0.79890 0.82244 1.16634 1.17783 1.16901 1.41522 1.05359 1.08872 1.57107 0.89984 0.87667 0.91478 0.75704 0.80870 0.87811 0.88436 0.91056 0.91294 0.90933 0.91009 0.90626 0.90883 0.91041 0.90815 0.91157 0.77810 0.83733 0.90547 0.76770 0.74246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.03 9.88 36.01 0.36 0.32 16 2 C 0.13 0.21 7.18 -81.87 -0.59 -0.38 16 3 C -0.23 -0.61 6.29 -103.35 -0.65 -1.26 16 4 C 0.60 2.30 7.78 -12.60 -0.10 2.20 16 5 O -0.54 -3.21 11.96 5.23 0.06 -3.14 16 6 N -0.64 -1.27 5.47 -11.05 -0.06 -1.33 16 7 C 0.00 0.01 6.90 -83.89 -0.58 -0.57 16 8 C 0.01 0.01 11.44 -16.67 -0.19 -0.18 16 9 N -0.35 -0.72 3.01 -9.16 -0.03 -0.75 16 10 C -0.17 0.19 5.59 59.85 0.33 0.52 16 11 Si 1.02 -2.46 12.79 -169.99 -2.17 -4.64 16 12 C -0.45 -0.16 8.65 101.05 0.87 0.71 16 13 C -0.45 1.07 8.65 101.05 0.87 1.95 16 14 C -0.45 0.76 8.65 101.05 0.87 1.63 16 15 N -0.28 -1.44 12.56 30.71 0.39 -1.06 16 16 C 0.05 0.24 10.84 -17.22 -0.19 0.06 16 17 C -0.17 -0.16 9.03 -37.50 -0.34 -0.50 16 18 C 0.03 0.02 6.51 -81.87 -0.53 -0.52 16 19 C -0.06 0.12 3.07 36.01 0.11 0.23 16 20 O -0.55 0.74 12.86 -35.23 -0.45 0.29 16 21 Si 0.97 -2.14 25.84 -169.99 -4.39 -6.53 16 22 H -0.24 0.18 7.11 56.52 0.40 0.58 16 23 H -0.25 0.53 7.11 56.52 0.40 0.93 16 24 H -0.25 0.43 7.11 56.52 0.40 0.84 16 25 N -0.53 -0.09 5.90 -5.42 -0.03 -0.12 16 26 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.10 0.22 6.46 -51.93 -0.34 -0.11 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.41 -0.38 7.95 -40.82 -0.32 -0.71 16 30 H 0.17 -0.42 8.06 -52.49 -0.42 -0.85 16 31 H 0.10 -0.11 7.96 -51.93 -0.41 -0.52 16 32 H 0.10 -0.32 7.96 -51.93 -0.41 -0.73 16 33 H 0.07 0.04 7.96 -51.93 -0.41 -0.37 16 34 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 35 H 0.07 0.17 7.96 -51.92 -0.41 -0.24 16 36 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 37 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 38 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 39 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16 40 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 41 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 42 H 0.21 1.19 5.91 -52.49 -0.31 0.88 16 43 H 0.15 -0.19 5.86 -52.49 -0.31 -0.50 16 44 H 0.08 -0.28 7.96 -51.93 -0.41 -0.69 16 45 H 0.38 -2.19 8.74 45.56 0.40 -1.79 16 46 H 0.42 -0.89 8.96 -40.82 -0.37 -1.25 16 LS Contribution 385.97 15.07 5.82 5.82 Total: 0.00 -9.62 385.97 -6.89 -16.51 By element: Atomic # 1 Polarization: -2.99 SS G_CDS: -6.27 Total: -9.26 kcal Atomic # 6 Polarization: 3.96 SS G_CDS: 0.26 Total: 4.22 kcal Atomic # 7 Polarization: -3.53 SS G_CDS: 0.27 Total: -3.26 kcal Atomic # 8 Polarization: -2.46 SS G_CDS: -0.39 Total: -2.85 kcal Atomic # 14 Polarization: -4.60 SS G_CDS: -6.57 Total: -11.17 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -9.62 -6.89 -16.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608520_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.851 kcal (2) G-P(sol) polarization free energy of solvation -9.620 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.506 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds