Wall clock time and date at job start Sun Mar 7 2021 05:44:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47073 * 2 1 4 4 H 1.48499 * 109.47282 * 60.00887 * 3 2 1 5 5 H 1.48509 * 109.47015 * 180.02562 * 3 2 1 6 6 H 1.48497 * 109.47212 * 300.00372 * 3 2 1 7 7 C 1.50707 * 109.46525 * 240.00585 * 2 1 3 8 8 C 1.36451 * 120.28875 * 239.99712 * 7 2 1 9 9 C 1.40095 * 119.25173 * 179.97438 * 8 7 2 10 10 C 1.40850 * 132.87159 * 179.97438 * 9 8 7 11 11 C 1.46568 * 126.57331 * 0.02562 * 10 9 8 12 12 O 1.21722 * 120.00255 * 54.70717 * 11 10 9 13 13 N 1.34776 * 119.99848 * 234.69546 * 11 10 9 14 14 C 1.45371 * 116.88481 * 5.26663 * 13 11 10 15 15 C 1.53042 * 105.95145 * 80.97089 * 14 13 11 16 16 C 1.54237 * 107.65450 * 102.32904 * 15 14 13 17 17 Si 1.86106 * 108.78549 * 321.45241 * 16 15 14 18 18 C 1.88268 * 110.20523 * 83.84749 * 17 16 15 19 19 C 1.56273 * 99.07040 * 96.01321 * 18 17 16 20 20 C 1.53721 * 109.69812 * 39.71657 * 19 18 17 21 21 C 1.55554 * 111.36483 * 311.86120 * 20 19 18 22 22 C 1.84507 * 113.09433 * 319.02035 * 17 16 15 23 23 C 1.42480 * 116.88273 * 185.51884 * 13 11 10 24 24 C 1.40547 * 106.84361 * 180.02562 * 10 9 8 25 25 N 1.30738 * 108.74445 * 359.97438 * 24 10 9 26 26 N 1.36580 * 120.22670 * 0.02562 * 9 8 7 27 27 C 1.36239 * 120.08704 * 0.02562 * 26 9 8 28 28 C 1.35194 * 120.70086 * 359.69065 * 27 26 9 29 29 H 0.96696 * 114.00592 * 59.99091 * 1 2 3 30 30 H 1.08996 * 109.47664 * 120.00590 * 2 1 3 31 31 H 1.07994 * 120.37865 * 0.02562 * 8 7 2 32 32 H 1.09001 * 110.10415 * 199.99805 * 14 13 11 33 33 H 1.09003 * 110.09514 * 321.64564 * 14 13 11 34 34 H 1.09001 * 109.86711 * 342.75502 * 15 14 13 35 35 H 1.09000 * 109.81703 * 221.86712 * 15 14 13 36 36 H 1.08996 * 109.58033 * 201.65872 * 16 15 14 37 37 H 1.09005 * 109.69655 * 81.31119 * 16 15 14 38 38 H 1.09002 * 111.47672 * 213.48075 * 18 17 16 39 39 H 1.08996 * 111.47324 * 338.54704 * 18 17 16 40 40 H 1.09006 * 109.43440 * 279.63976 * 19 18 17 41 41 H 1.08998 * 109.38913 * 159.76453 * 19 18 17 42 42 H 1.09001 * 109.11088 * 191.35986 * 20 19 18 43 43 H 1.09004 * 109.02641 * 72.31266 * 20 19 18 44 44 H 1.08995 * 111.12004 * 270.21694 * 21 20 19 45 45 H 1.08997 * 111.15109 * 146.08701 * 21 20 19 46 46 H 1.08999 * 109.71019 * 325.23676 * 22 17 16 47 47 H 1.09000 * 109.71065 * 204.60026 * 22 17 16 48 48 H 1.08997 * 109.82448 * 3.58271 * 23 13 11 49 49 H 1.08996 * 109.82332 * 124.44988 * 23 13 11 50 50 H 1.08002 * 125.62863 * 180.02562 * 24 10 9 51 51 H 1.07996 * 119.64955 * 180.02562 * 27 26 9 52 52 H 1.08003 * 119.83957 * 180.30240 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 1 1.5552 2.4564 1.2126 5 1 3.5351 1.7564 -0.0006 6 1 1.5549 2.4565 -1.2124 7 6 1.9312 -0.7103 -1.2306 8 6 2.7161 -1.8203 -1.1125 9 6 3.1704 -2.4639 -2.2709 10 6 3.9746 -3.6007 -2.4828 11 6 4.5758 -4.4499 -1.4505 12 8 3.8754 -4.9492 -0.5892 13 7 5.9041 -4.6781 -1.4550 14 6 6.6917 -3.9562 -2.4408 15 6 6.9177 -2.5594 -1.8577 16 6 8.3571 -2.5101 -1.3060 17 14 8.7501 -4.1456 -0.5097 18 6 9.3231 -5.3809 -1.8098 19 6 10.8679 -5.2035 -1.6544 20 6 11.2250 -5.0525 -0.1669 21 6 10.3073 -4.0096 0.5332 22 6 7.3462 -4.8273 0.4746 23 6 6.4013 -5.6079 -0.4968 24 6 4.0899 -3.7644 -3.8739 25 7 3.4162 -2.8133 -4.4661 26 7 2.8302 -1.9829 -3.5031 27 6 2.0470 -0.8734 -3.6108 28 6 1.5925 -0.2395 -2.5065 29 1 -0.3934 0.4418 -0.7649 30 1 1.7924 -0.5139 0.8899 31 1 2.9833 -2.1989 -0.1370 32 1 7.6476 -4.4566 -2.5959 33 1 6.1452 -3.8905 -3.3816 34 1 6.2065 -2.3746 -1.0526 35 1 6.7951 -1.8088 -2.6385 36 1 8.4374 -1.7144 -0.5654 37 1 9.0567 -2.3229 -2.1208 38 1 9.0108 -6.3953 -1.5615 39 1 8.9869 -5.0957 -2.8066 40 1 11.1870 -4.3132 -2.1963 41 1 11.3754 -6.0776 -2.0623 42 1 12.2626 -4.7300 -0.0799 43 1 11.1092 -6.0177 0.3262 44 1 10.7338 -3.0084 0.4733 45 1 10.1123 -4.2896 1.5684 46 1 6.7971 -4.0118 0.9452 47 1 7.7277 -5.5040 1.2392 48 1 5.5722 -6.0412 0.0626 49 1 6.9585 -6.3968 -1.0019 50 1 4.6431 -4.5472 -4.3716 51 1 1.7820 -0.4994 -4.5886 52 1 0.9684 0.6361 -2.6081 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608542_11618758.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:44:43 Heat of formation + Delta-G solvation = 21.824865 kcal Electronic energy + Delta-G solvation = -33248.901097 eV Core-core repulsion = 29146.380479 eV Total energy + Delta-G solvation = -4102.520618 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 373.173 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.34121 -41.15177 -39.37708 -37.57899 -37.27563 -36.29653 -34.45325 -33.89945 -32.13647 -31.70053 -30.00880 -29.83678 -27.30607 -27.02146 -25.25126 -25.16941 -24.41257 -23.19854 -22.74728 -22.36688 -21.10164 -20.14859 -18.96691 -18.62362 -18.08647 -17.55959 -17.45307 -16.83976 -16.60316 -16.31980 -15.93097 -15.86365 -15.79652 -15.57335 -15.26465 -15.14755 -15.03009 -14.75445 -14.51443 -14.42756 -14.21791 -14.01453 -13.60969 -13.53119 -13.25147 -13.22798 -12.96546 -12.83861 -12.67478 -12.46462 -12.35646 -12.28898 -12.12077 -12.01920 -11.98159 -11.93316 -11.70903 -11.53017 -11.43829 -10.80134 -10.79229 -10.53575 -10.40571 -10.32780 -10.28179 -9.52860 -8.69781 -0.53063 -0.14077 0.95352 1.03350 1.20642 1.27397 1.40824 1.56426 1.72032 1.77427 1.79652 1.89163 2.13098 2.37200 2.51607 3.04649 3.15572 3.32111 3.44455 3.66108 3.70798 3.82749 3.87902 3.98989 4.03536 4.07028 4.08934 4.19893 4.23694 4.30117 4.32075 4.34633 4.41126 4.46491 4.48744 4.57283 4.61474 4.64875 4.67872 4.76859 4.96837 4.98470 5.01777 5.04132 5.05065 5.11708 5.12416 5.17677 5.25301 5.25935 5.30821 5.36318 5.41953 5.45793 5.66041 5.83122 6.33424 6.34632 6.38252 7.33827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.081 4.081 3 Si 0.950 3.050 4 H -0.243 1.243 5 H -0.248 1.248 6 H -0.246 1.246 7 C -0.070 4.070 8 C -0.096 4.096 9 C 0.157 3.843 10 C -0.302 4.302 11 C 0.592 3.408 12 O -0.534 6.534 13 N -0.598 5.598 14 C 0.069 3.931 15 C -0.121 4.121 16 C -0.408 4.408 17 Si 0.987 3.013 18 C -0.411 4.411 19 C -0.120 4.120 20 C -0.118 4.118 21 C -0.407 4.407 22 C -0.426 4.426 23 C 0.118 3.882 24 C 0.116 3.884 25 N -0.310 5.310 26 N -0.267 5.267 27 C 0.126 3.874 28 C -0.166 4.166 29 H 0.376 0.624 30 H 0.124 0.876 31 H 0.153 0.847 32 H 0.109 0.891 33 H 0.089 0.911 34 H 0.071 0.929 35 H 0.066 0.934 36 H 0.075 0.925 37 H 0.079 0.921 38 H 0.081 0.919 39 H 0.083 0.917 40 H 0.063 0.937 41 H 0.065 0.935 42 H 0.061 0.939 43 H 0.061 0.939 44 H 0.075 0.925 45 H 0.077 0.923 46 H 0.080 0.920 47 H 0.087 0.913 48 H 0.103 0.897 49 H 0.072 0.928 50 H 0.200 0.800 51 H 0.177 0.823 52 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.197 3.933 -1.742 4.830 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.191 4.191 3 Si 0.769 3.231 4 H -0.166 1.166 5 H -0.171 1.171 6 H -0.169 1.169 7 C -0.076 4.076 8 C -0.116 4.116 9 C 0.037 3.963 10 C -0.317 4.317 11 C 0.380 3.620 12 O -0.410 6.410 13 N -0.330 5.330 14 C -0.053 4.053 15 C -0.160 4.160 16 C -0.494 4.494 17 Si 1.181 2.819 18 C -0.497 4.497 19 C -0.158 4.158 20 C -0.155 4.155 21 C -0.493 4.493 22 C -0.513 4.513 23 C -0.005 4.005 24 C -0.064 4.064 25 N -0.130 5.130 26 N -0.032 5.032 27 C 0.000 4.000 28 C -0.188 4.188 29 H 0.223 0.777 30 H 0.142 0.858 31 H 0.171 0.829 32 H 0.127 0.873 33 H 0.107 0.893 34 H 0.090 0.910 35 H 0.085 0.915 36 H 0.094 0.906 37 H 0.097 0.903 38 H 0.100 0.900 39 H 0.101 0.899 40 H 0.082 0.918 41 H 0.084 0.916 42 H 0.080 0.920 43 H 0.080 0.920 44 H 0.094 0.906 45 H 0.096 0.904 46 H 0.099 0.901 47 H 0.106 0.894 48 H 0.122 0.878 49 H 0.090 0.910 50 H 0.216 0.784 51 H 0.194 0.806 52 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 1.930 4.601 -1.943 5.354 hybrid contribution 0.284 -0.566 0.047 0.635 sum 2.214 4.035 -1.896 4.978 Atomic orbital electron populations 1.86620 1.16346 1.81553 1.48946 1.25081 0.85543 1.10901 0.97536 0.85706 0.81064 0.74043 0.82265 1.16559 1.17102 1.16925 1.20411 0.96232 0.95142 0.95770 1.20471 0.99058 0.94575 0.97503 1.19170 0.96126 0.94702 0.86344 1.19566 1.14477 1.03597 0.94052 1.17249 0.82119 0.79359 0.83268 1.90813 1.61510 1.50500 1.38208 1.46756 1.07003 1.44308 1.34968 1.22387 0.98054 0.92667 0.92213 1.21976 0.96670 0.96518 1.00834 1.26419 0.99496 1.16654 1.06833 0.79957 0.66641 0.67617 0.67685 1.27153 1.00905 1.11026 1.10566 1.21984 0.95480 1.01993 0.96314 1.21804 0.99870 0.99019 0.94834 1.26535 1.14760 1.01266 1.06776 1.26963 1.11627 1.05994 1.06752 1.21102 0.98894 0.90749 0.89798 1.23968 0.94939 0.95987 0.91505 1.77630 1.18517 1.06217 1.10677 1.46001 1.32566 1.18998 1.05676 1.21525 0.91686 0.85086 1.01726 1.20709 1.04511 1.03013 0.90561 0.77678 0.85814 0.82893 0.87319 0.89289 0.91039 0.91489 0.90599 0.90260 0.89998 0.89890 0.91829 0.91615 0.91976 0.91982 0.90580 0.90398 0.90135 0.89445 0.87844 0.90993 0.78360 0.80583 0.82262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.58 12.87 -35.23 -0.45 0.13 16 2 C -0.08 0.15 2.84 36.01 0.10 0.26 16 3 Si 0.95 -2.20 27.27 -169.99 -4.64 -6.83 16 4 H -0.24 0.19 7.11 56.52 0.40 0.60 16 5 H -0.25 0.26 7.11 56.52 0.40 0.66 16 6 H -0.25 0.72 7.05 56.52 0.40 1.12 16 7 C -0.07 0.06 4.53 -104.54 -0.47 -0.41 16 8 C -0.10 -0.11 9.70 -39.53 -0.38 -0.49 16 9 C 0.16 0.38 6.79 -84.07 -0.57 -0.19 16 10 C -0.30 -0.75 4.68 -104.68 -0.49 -1.24 16 11 C 0.59 1.93 6.83 -12.90 -0.09 1.84 16 12 O -0.53 -3.67 16.12 5.17 0.08 -3.59 16 13 N -0.60 -0.26 2.21 -177.00 -0.39 -0.65 16 14 C 0.07 -0.10 5.24 -4.63 -0.02 -0.12 16 15 C -0.12 0.11 5.53 -26.06 -0.14 -0.03 16 16 C -0.41 0.70 5.09 37.80 0.19 0.89 16 17 Si 0.99 -2.27 8.82 -169.99 -1.50 -3.77 16 18 C -0.41 0.85 5.11 38.91 0.20 1.05 16 19 C -0.12 0.14 5.96 -24.60 -0.15 0.00 16 20 C -0.12 0.08 6.09 -25.00 -0.15 -0.07 16 21 C -0.41 0.44 5.84 38.52 0.22 0.66 16 22 C -0.43 0.41 5.07 38.98 0.20 0.60 16 23 C 0.12 0.02 6.01 -4.33 -0.03 -0.01 16 24 C 0.12 0.13 9.82 -17.15 -0.17 -0.03 16 25 N -0.31 -0.78 12.57 30.75 0.39 -0.39 16 26 N -0.27 -0.48 3.86 -10.55 -0.04 -0.52 16 27 C 0.13 -0.15 11.18 -16.68 -0.19 -0.34 16 28 C -0.17 0.41 8.38 -39.95 -0.33 0.08 16 29 H 0.38 -1.89 8.07 45.56 0.37 -1.52 16 30 H 0.12 -0.29 7.71 -51.93 -0.40 -0.69 16 31 H 0.15 0.12 7.95 -52.49 -0.42 -0.30 16 32 H 0.11 -0.32 2.80 -51.93 -0.15 -0.46 16 33 H 0.09 -0.18 4.55 -51.93 -0.24 -0.42 16 34 H 0.07 0.02 7.42 -51.93 -0.39 -0.36 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 36 H 0.08 -0.11 7.97 -51.93 -0.41 -0.53 16 37 H 0.08 -0.17 7.97 -51.93 -0.41 -0.58 16 38 H 0.08 -0.17 7.23 -51.93 -0.38 -0.55 16 39 H 0.08 -0.23 6.11 -51.93 -0.32 -0.55 16 40 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 42 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.08 -0.07 8.03 -51.93 -0.42 -0.49 16 45 H 0.08 -0.08 8.03 -51.93 -0.42 -0.50 16 46 H 0.08 0.00 7.96 -51.93 -0.41 -0.41 16 47 H 0.09 -0.13 7.96 -51.93 -0.41 -0.55 16 48 H 0.10 0.23 6.56 -51.93 -0.34 -0.11 16 49 H 0.07 -0.11 6.83 -51.93 -0.35 -0.47 16 50 H 0.20 -0.42 7.49 -52.49 -0.39 -0.82 16 51 H 0.18 -0.70 8.06 -52.49 -0.42 -1.12 16 52 H 0.16 -0.93 7.26 -52.48 -0.38 -1.31 16 LS Contribution 396.31 15.07 5.97 5.97 Total: 0.00 -8.92 396.31 -10.05 -18.97 By element: Atomic # 1 Polarization: -4.55 SS G_CDS: -7.20 Total: -11.75 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: -2.27 Total: 2.44 kcal Atomic # 7 Polarization: -1.52 SS G_CDS: -0.04 Total: -1.57 kcal Atomic # 8 Polarization: -3.09 SS G_CDS: -0.37 Total: -3.46 kcal Atomic # 14 Polarization: -4.47 SS G_CDS: -6.13 Total: -10.61 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -8.92 -10.05 -18.97 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608542_11618758.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.799 kcal (2) G-P(sol) polarization free energy of solvation -8.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.974 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.825 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds