Wall clock time and date at job start Sun Mar 7 2021 06:33:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36420 * 125.79965 * 2 1 4 4 C 1.47383 * 127.19068 * 0.02562 * 3 2 1 5 5 O 1.21607 * 119.99822 * 4.88685 * 4 3 2 6 6 N 1.34783 * 119.99721 * 184.61240 * 4 3 2 7 7 C 1.46089 * 122.76596 * 355.23816 * 6 4 3 8 8 C 1.46006 * 114.87568 * 78.52876 * 7 6 4 9 9 C 1.56528 * 108.97158 * 60.18248 * 8 7 6 10 10 Si 1.83376 * 108.23887 * 291.78045 * 9 8 7 11 11 C 1.88361 * 111.35550 * 322.39423 * 10 9 8 12 12 C 1.56251 * 99.09011 * 221.45911 * 11 10 9 13 13 C 1.53720 * 109.67999 * 39.76758 * 12 11 10 14 14 C 1.55525 * 111.35749 * 311.79391 * 13 12 11 15 15 C 1.87776 * 113.96671 * 86.62824 * 10 9 8 16 16 C 1.44788 * 122.76174 * 174.95192 * 6 4 3 17 17 C 1.47017 * 105.61503 * 180.28290 * 3 2 1 18 18 C 1.34176 * 105.95809 * 359.56744 * 17 3 2 19 19 C 1.50699 * 125.44365 * 180.14265 * 18 17 3 20 20 O 1.42902 * 109.46930 * 300.32103 * 19 18 17 21 21 Si 1.86300 * 109.47397 * 180.31885 * 19 18 17 22 22 H 1.48504 * 109.46856 * 59.99693 * 21 19 18 23 23 H 1.48491 * 109.47041 * 180.02562 * 21 19 18 24 24 H 1.48501 * 109.47034 * 300.00299 * 21 19 18 25 25 O 1.33653 * 125.80554 * 180.02562 * 2 1 3 26 26 H 1.09003 * 109.47007 * 90.00403 * 1 2 3 27 27 H 1.09006 * 109.46858 * 210.00057 * 1 2 3 28 28 H 1.09003 * 109.47285 * 329.99864 * 1 2 3 29 29 H 1.09001 * 108.40395 * 199.93039 * 7 6 4 30 30 H 1.09005 * 108.40269 * 317.13225 * 7 6 4 31 31 H 1.09001 * 109.55748 * 180.02562 * 8 7 6 32 32 H 1.08998 * 109.55889 * 300.23237 * 8 7 6 33 33 H 1.08998 * 109.70554 * 51.45884 * 9 8 7 34 34 H 1.08990 * 109.71091 * 172.04977 * 9 8 7 35 35 H 1.09001 * 111.47100 * 338.93249 * 11 10 9 36 36 H 1.08999 * 111.46930 * 103.99014 * 11 10 9 37 37 H 1.08998 * 109.43695 * 279.69405 * 12 11 10 38 38 H 1.08995 * 109.39099 * 159.80852 * 12 11 10 39 39 H 1.09001 * 109.10617 * 191.28912 * 13 12 11 40 40 H 1.09004 * 109.02666 * 72.23748 * 13 12 11 41 41 H 1.09003 * 111.11234 * 270.25721 * 14 13 12 42 42 H 1.08996 * 111.14881 * 146.14827 * 14 13 12 43 43 H 1.08998 * 110.13800 * 80.06472 * 15 10 9 44 44 H 1.09008 * 110.13775 * 201.82184 * 15 10 9 45 45 H 1.09001 * 110.04705 * 50.60867 * 16 6 4 46 46 H 1.09001 * 110.03678 * 172.11184 * 16 6 4 47 47 H 1.08006 * 127.02034 * 179.70724 * 17 3 2 48 48 H 1.08996 * 109.46738 * 60.31415 * 19 18 17 49 49 H 0.96709 * 113.99628 * 299.99318 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8738 2.5158 0.0005 5 8 0.6926 2.7902 0.0907 6 7 2.7893 3.5006 -0.0934 7 6 4.2277 3.2453 -0.0966 8 6 4.7653 2.7758 -1.3704 9 6 4.4943 3.8590 -2.4673 10 14 2.6870 3.9301 -2.7696 11 6 1.9110 2.2154 -2.6939 12 6 0.9348 2.3324 -3.9084 13 6 1.6250 3.0863 -5.0565 14 6 2.3018 4.3920 -4.5507 15 6 1.7642 5.0816 -1.6085 16 6 2.4280 4.8982 -0.2055 17 6 3.6849 0.5992 -0.0070 18 6 3.5860 -0.7389 -0.0007 19 6 4.7460 -1.7009 -0.0013 20 8 5.5420 -1.4865 -1.1685 21 14 4.1029 -3.4494 -0.0008 22 1 3.2742 -3.6723 -1.2128 23 1 5.2459 -4.3972 -0.0007 24 1 3.2756 -3.6721 1.2122 25 8 2.2889 -1.0839 -0.0005 26 1 -0.3633 -0.0001 -1.0277 27 1 -0.3633 -0.8900 0.5139 28 1 -0.3634 0.8900 0.5139 29 1 4.7415 4.1675 0.1748 30 1 4.4461 2.4973 0.6657 31 1 5.8389 2.6133 -1.2756 32 1 4.2782 1.8416 -1.6499 33 1 4.8473 4.8300 -2.1201 34 1 5.0112 3.5875 -3.3876 35 1 2.6539 1.4339 -2.8529 36 1 1.3696 2.0635 -1.7601 37 1 0.0403 2.8756 -3.6037 38 1 0.6558 1.3343 -4.2458 39 1 0.8833 3.3391 -5.8141 40 1 2.3826 2.4407 -5.5008 41 1 1.6124 5.2351 -4.5973 42 1 3.2145 4.6032 -5.1078 43 1 1.8695 6.1140 -1.9417 44 1 0.7105 4.8056 -1.5653 45 1 1.7156 5.1637 0.5756 46 1 3.3187 5.5216 -0.1279 47 1 4.5927 1.1842 -0.0133 48 1 5.3542 -1.5371 0.8883 49 1 5.0643 -1.6151 -1.9995 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608542_13308374.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:33:36 Heat of formation + Delta-G solvation = -57.676839 kcal Electronic energy + Delta-G solvation = -30345.639826 eV Core-core repulsion = 26592.057426 eV Total energy + Delta-G solvation = -3753.582400 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -43.82187 -41.28383 -38.24566 -37.92152 -36.14415 -34.84576 -33.60383 -33.07072 -31.04377 -29.67556 -29.30900 -27.66025 -25.90948 -25.17480 -24.45369 -23.43999 -22.82392 -21.48908 -20.97639 -19.63642 -18.67897 -18.10390 -17.63007 -17.28766 -16.98930 -16.47154 -16.19536 -15.90097 -15.78421 -15.62519 -15.40074 -15.01855 -14.80749 -14.62316 -14.50235 -14.17817 -13.99412 -13.85143 -13.80680 -13.51134 -13.14547 -12.89943 -12.87772 -12.80342 -12.59667 -12.42633 -12.30405 -12.23545 -12.08705 -11.94798 -11.84913 -11.67589 -11.29496 -10.94144 -10.70690 -10.60063 -10.52111 -10.35255 -10.17537 -9.72070 -9.41372 0.34689 0.85078 1.00728 1.35361 1.41845 1.70658 1.74442 1.77415 1.87336 1.92751 2.04588 2.35623 2.69842 3.15301 3.37218 3.53642 3.65585 3.79810 4.03421 4.12483 4.17837 4.19030 4.21874 4.29083 4.31154 4.35373 4.38861 4.45315 4.50203 4.56332 4.62145 4.68911 4.73029 4.75905 4.80260 4.83353 4.90708 4.94398 5.08218 5.13006 5.15154 5.16377 5.23340 5.24388 5.28269 5.39570 5.42035 5.51123 5.56694 5.66149 5.96251 6.30784 6.41770 7.20725 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C 0.092 3.908 3 C -0.245 4.245 4 C 0.613 3.387 5 O -0.531 6.531 6 N -0.608 5.608 7 C 0.087 3.913 8 C -0.146 4.146 9 C -0.406 4.406 10 Si 0.986 3.014 11 C -0.416 4.416 12 C -0.117 4.117 13 C -0.115 4.115 14 C -0.409 4.409 15 C -0.422 4.422 16 C 0.120 3.880 17 C -0.164 4.164 18 C -0.062 4.062 19 C -0.039 4.039 20 O -0.528 6.528 21 Si 0.953 3.047 22 H -0.249 1.249 23 H -0.245 1.245 24 H -0.247 1.247 25 O -0.173 6.173 26 H 0.091 0.909 27 H 0.080 0.920 28 H 0.113 0.887 29 H 0.085 0.915 30 H 0.082 0.918 31 H 0.086 0.914 32 H 0.086 0.914 33 H 0.077 0.923 34 H 0.081 0.919 35 H 0.071 0.929 36 H 0.092 0.908 37 H 0.061 0.939 38 H 0.060 0.940 39 H 0.059 0.941 40 H 0.058 0.942 41 H 0.074 0.926 42 H 0.074 0.926 43 H 0.080 0.920 44 H 0.087 0.913 45 H 0.076 0.924 46 H 0.089 0.911 47 H 0.180 0.820 48 H 0.136 0.864 49 H 0.381 0.619 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.256 -0.160 0.141 3.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.039 3.961 3 C -0.249 4.249 4 C 0.406 3.594 5 O -0.410 6.410 6 N -0.342 5.342 7 C -0.036 4.036 8 C -0.184 4.184 9 C -0.493 4.493 10 Si 1.178 2.822 11 C -0.501 4.501 12 C -0.155 4.155 13 C -0.152 4.152 14 C -0.495 4.495 15 C -0.509 4.509 16 C -0.002 4.002 17 C -0.183 4.183 18 C -0.110 4.110 19 C -0.149 4.149 20 O -0.334 6.334 21 Si 0.773 3.227 22 H -0.172 1.172 23 H -0.168 1.168 24 H -0.170 1.170 25 O -0.071 6.071 26 H 0.110 0.890 27 H 0.099 0.901 28 H 0.131 0.869 29 H 0.103 0.897 30 H 0.100 0.900 31 H 0.105 0.895 32 H 0.104 0.896 33 H 0.096 0.904 34 H 0.099 0.901 35 H 0.090 0.910 36 H 0.111 0.889 37 H 0.080 0.920 38 H 0.079 0.921 39 H 0.078 0.922 40 H 0.077 0.923 41 H 0.093 0.907 42 H 0.093 0.907 43 H 0.099 0.901 44 H 0.106 0.894 45 H 0.094 0.906 46 H 0.108 0.892 47 H 0.197 0.803 48 H 0.154 0.846 49 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges 2.712 -1.023 0.700 2.982 hybrid contribution -0.178 0.566 -0.634 0.868 sum 2.535 -0.458 0.066 2.576 Atomic orbital electron populations 1.20735 0.83595 1.05544 1.04736 1.22814 0.93926 0.82836 0.96491 1.21033 0.93299 0.93575 1.17000 1.16709 0.84832 0.83471 0.74424 1.90800 1.16269 1.83616 1.50329 1.47375 1.06533 1.07061 1.73189 1.20589 0.80615 1.03507 0.98867 1.21318 1.02272 0.99994 0.94829 1.26371 1.19636 1.01245 1.02075 0.79842 0.66897 0.68640 0.66772 1.27444 1.05496 1.16499 1.00681 1.21933 0.98669 1.00160 0.94695 1.21779 0.99596 0.95634 0.98239 1.26577 1.03786 0.99647 1.19503 1.27373 1.08322 1.10207 1.04965 1.21591 1.00554 0.80369 0.97725 1.23458 0.97429 0.93397 1.03993 1.22717 0.82790 0.95895 1.09639 1.24325 0.90529 1.07349 0.92736 1.86567 1.38204 1.93321 1.15265 0.85565 0.80108 0.74178 0.82817 1.17166 1.16838 1.16972 1.83660 1.16564 1.35233 1.71595 0.89019 0.90081 0.86895 0.89668 0.90010 0.89540 0.89564 0.90408 0.90050 0.90978 0.88944 0.92030 0.92112 0.92221 0.92282 0.90704 0.90724 0.90101 0.89436 0.90557 0.89249 0.80299 0.84602 0.77112 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.03 9.94 36.01 0.36 0.33 16 2 C 0.09 0.16 7.30 -34.96 -0.26 -0.09 16 3 C -0.24 -0.40 4.35 -103.27 -0.45 -0.85 16 4 C 0.61 1.49 4.10 -12.54 -0.05 1.44 16 5 O -0.53 -2.63 13.67 5.27 0.07 -2.56 16 6 N -0.61 -0.07 1.63 -178.52 -0.29 -0.36 16 7 C 0.09 -0.18 4.39 -7.58 -0.03 -0.21 16 8 C -0.15 0.33 4.32 -28.15 -0.12 0.21 16 9 C -0.41 0.74 4.83 39.06 0.19 0.93 16 10 Si 0.99 -0.65 8.77 -169.99 -1.49 -2.14 16 11 C -0.42 -0.48 4.20 38.90 0.16 -0.32 16 12 C -0.12 -0.18 5.96 -24.61 -0.15 -0.32 16 13 C -0.11 -0.13 6.09 -25.01 -0.15 -0.28 16 14 C -0.41 -0.18 5.84 38.50 0.22 0.04 16 15 C -0.42 -0.07 5.08 38.92 0.20 0.12 16 16 C 0.12 -0.04 5.77 -3.19 -0.02 -0.06 16 17 C -0.16 0.00 7.25 -37.46 -0.27 -0.27 16 18 C -0.06 -0.01 6.20 -35.74 -0.22 -0.23 16 19 C -0.04 0.07 2.97 36.01 0.11 0.17 16 20 O -0.53 0.87 12.86 -35.23 -0.45 0.42 16 21 Si 0.95 -0.91 27.37 -169.99 -4.65 -5.56 16 22 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 23 H -0.25 0.05 7.11 56.52 0.40 0.45 16 24 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 25 O -0.17 -0.26 8.89 7.64 0.07 -0.20 16 26 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 27 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 28 H 0.11 0.16 6.40 -51.93 -0.33 -0.17 16 29 H 0.08 -0.31 7.19 -51.93 -0.37 -0.68 16 30 H 0.08 -0.20 5.33 -51.93 -0.28 -0.48 16 31 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.09 -0.12 3.84 -51.93 -0.20 -0.32 16 33 H 0.08 -0.20 7.93 -51.93 -0.41 -0.61 16 34 H 0.08 -0.14 7.95 -51.93 -0.41 -0.55 16 35 H 0.07 0.08 7.12 -51.93 -0.37 -0.29 16 36 H 0.09 0.22 3.14 -51.93 -0.16 0.05 16 37 H 0.06 0.12 8.14 -51.93 -0.42 -0.30 16 38 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 39 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 40 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 41 H 0.07 0.05 8.03 -51.93 -0.42 -0.37 16 42 H 0.07 0.00 8.03 -51.93 -0.42 -0.42 16 43 H 0.08 -0.08 8.00 -51.93 -0.42 -0.49 16 44 H 0.09 0.20 7.65 -51.92 -0.40 -0.20 16 45 H 0.08 0.06 8.10 -51.93 -0.42 -0.36 16 46 H 0.09 -0.25 7.19 -51.93 -0.37 -0.62 16 47 H 0.18 -0.33 3.79 -52.48 -0.20 -0.53 16 48 H 0.14 -0.45 7.96 -51.93 -0.41 -0.86 16 49 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 LS Contribution 356.47 15.07 5.37 5.37 Total: 0.00 -5.68 356.47 -8.81 -14.49 By element: Atomic # 1 Polarization: -3.12 SS G_CDS: -6.95 Total: -10.07 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -0.48 Total: 0.60 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.29 Total: -0.36 kcal Atomic # 8 Polarization: -2.02 SS G_CDS: -0.31 Total: -2.34 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -6.14 Total: -7.70 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -5.68 -8.81 -14.49 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608542_13308374.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.184 kcal (2) G-P(sol) polarization free energy of solvation -5.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.869 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.677 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds