Wall clock time and date at job start Sun Mar 7 2021 09:35:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52996 * 109.47056 * 2 1 4 4 C 1.52997 * 109.47452 * 120.00172 * 2 1 3 5 5 H 1.09001 * 109.46832 * 300.00199 * 4 2 1 6 6 C 1.53006 * 109.47127 * 59.99878 * 4 2 1 7 7 C 1.52997 * 109.47127 * 179.97438 * 6 4 2 8 8 C 1.53000 * 109.47060 * 300.00449 * 7 6 4 9 9 H 1.09004 * 109.46724 * 180.02562 * 8 7 6 10 10 N 1.46500 * 109.47023 * 299.99760 * 8 7 6 11 11 C 1.34780 * 119.99887 * 205.00438 * 10 8 7 12 12 O 1.21569 * 120.00070 * 359.97438 * 11 10 8 13 13 C 1.47693 * 119.99839 * 180.02562 * 11 10 8 14 14 C 1.39819 * 120.16536 * 179.97438 * 13 11 10 15 15 F 1.35101 * 120.11302 * 0.02562 * 14 13 11 16 16 C 1.38321 * 119.78000 * 180.02562 * 14 13 11 17 17 C 1.38207 * 120.11656 * 359.97438 * 16 14 13 18 18 C 1.38457 * 120.33913 * 0.02562 * 17 16 14 19 19 C 1.50697 * 119.88931 * 179.97438 * 18 17 16 20 20 O 1.42907 * 109.46881 * 119.99933 * 19 18 17 21 21 Si 1.86301 * 109.47476 * 0.02562 * 19 18 17 22 22 C 1.37860 * 120.21570 * 359.71729 * 18 17 16 23 23 C 1.52996 * 109.47328 * 60.00126 * 8 7 6 24 24 C 1.52997 * 109.47232 * 179.97438 * 4 2 1 25 25 H 1.08998 * 109.47061 * 299.99160 * 1 2 3 26 26 H 1.09000 * 109.47360 * 59.99978 * 1 2 3 27 27 H 1.09002 * 109.46668 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46812 * 240.00389 * 2 1 3 29 29 H 1.09001 * 109.46997 * 59.99942 * 3 2 1 30 30 H 1.08996 * 109.47452 * 180.02562 * 3 2 1 31 31 H 1.09000 * 109.47054 * 300.00209 * 3 2 1 32 32 H 1.08998 * 109.46505 * 59.99871 * 6 4 2 33 33 H 1.08996 * 109.46884 * 300.00752 * 6 4 2 34 34 H 1.09002 * 109.47153 * 180.02562 * 7 6 4 35 35 H 1.09001 * 109.46832 * 60.00321 * 7 6 4 36 36 H 0.96999 * 120.00261 * 25.00074 * 10 8 7 37 37 H 1.08003 * 119.94703 * 179.97438 * 16 14 13 38 38 H 1.07998 * 119.83012 * 180.02562 * 17 16 14 39 39 H 1.09000 * 109.47605 * 239.99880 * 19 18 17 40 40 H 0.96693 * 113.99943 * 300.00146 * 20 19 18 41 41 H 1.48498 * 110.00159 * 179.97438 * 21 19 18 42 42 H 1.48503 * 109.99383 * 301.31385 * 21 19 18 43 43 H 1.08005 * 120.05857 * 180.30084 * 22 18 17 44 44 H 1.08992 * 109.47554 * 59.99639 * 23 8 7 45 45 H 1.09004 * 109.47108 * 179.97438 * 23 8 7 46 46 H 1.09002 * 109.47045 * 59.99942 * 24 4 2 47 47 H 1.09001 * 109.47375 * 299.99867 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 1.2492 5 1 1.6768 -0.2074 2.1392 6 6 1.5301 -2.1638 1.2492 7 6 2.0407 -2.8853 2.4980 8 6 3.5707 -2.8851 2.4973 9 1 3.9344 -3.3996 3.3869 10 7 4.0585 -3.5755 1.3008 11 6 5.2806 -4.1441 1.3020 12 8 5.9782 -4.0836 2.2958 13 6 5.7726 -4.8396 0.0956 14 6 7.0399 -5.4302 0.0928 15 9 7.8195 -5.3672 1.1944 16 6 7.4930 -6.0791 -1.0417 17 6 6.6954 -6.1440 -2.1686 18 6 5.4396 -5.5609 -2.1712 19 6 4.5788 -5.6373 -3.4057 20 8 3.3587 -6.3131 -3.0944 21 14 5.4844 -6.5739 -4.7374 22 6 4.9722 -4.9153 -1.0464 23 6 4.0806 -1.4427 2.4974 24 6 3.5701 -0.7218 1.2488 25 1 -0.3633 0.5137 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.6767 1.9563 0.8900 30 1 3.1300 1.4425 -0.0005 31 1 1.6766 1.9563 -0.8900 32 1 1.8934 -2.6775 0.3591 33 1 0.4402 -2.1638 1.2491 34 1 1.6778 -3.9131 2.4978 35 1 1.6777 -2.3716 3.3882 36 1 3.5021 -3.6235 0.5078 37 1 8.4716 -6.5358 -1.0469 38 1 7.0536 -6.6522 -3.0516 39 1 4.3566 -4.6296 -3.7567 40 1 3.4805 -7.2176 -2.7751 41 1 4.6456 -6.6567 -5.9601 42 1 6.7703 -5.8990 -5.0479 43 1 3.9902 -4.4655 -1.0496 44 1 3.7177 -0.9290 3.3875 45 1 5.1707 -1.4426 2.4974 46 1 3.9338 0.3058 1.2486 47 1 3.9331 -1.2359 0.3588 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16623128_12335834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:35:07 Heat of formation + Delta-G solvation = -105.129429 kcal Electronic energy + Delta-G solvation = -28476.099749 eV Core-core repulsion = 24538.819351 eV Total energy + Delta-G solvation = -3937.280398 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.173 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -49.83921 -41.60507 -40.53656 -39.37638 -37.60649 -36.63681 -34.07200 -32.56470 -32.28645 -32.00716 -29.75783 -28.10954 -26.74588 -25.59691 -24.13227 -23.44224 -23.15244 -21.75132 -20.92587 -20.20467 -19.33104 -18.35984 -18.31536 -17.44960 -16.92628 -16.66349 -16.61347 -16.32939 -15.99096 -15.81765 -15.68210 -15.30237 -15.07173 -14.89048 -14.75924 -14.44590 -14.36374 -14.32875 -14.15454 -13.74012 -13.45690 -13.24612 -13.16655 -13.13232 -12.87802 -12.68360 -12.31205 -12.28187 -12.12168 -12.10919 -11.94630 -11.79828 -11.41568 -11.06258 -10.99208 -10.88569 -10.60498 -10.41008 -10.01962 -9.82391 -5.18781 -0.50288 -0.10701 1.10953 1.47713 1.69603 1.83892 2.06046 2.50864 3.02424 3.21502 3.35897 3.45105 3.51129 3.58479 3.62952 3.69136 3.87871 3.96364 4.00788 4.05873 4.17643 4.25922 4.27302 4.31767 4.44097 4.47204 4.50763 4.57134 4.59848 4.65404 4.72751 4.73987 4.77580 4.85763 4.89021 4.92501 4.97747 5.01976 5.03892 5.07705 5.08829 5.15229 5.23437 5.27842 5.31349 5.46437 5.50410 5.52746 5.55861 6.38236 6.44425 7.19442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.073 0.927 6 C -0.118 4.118 7 C -0.128 4.128 8 C 0.147 3.853 9 H 0.090 0.910 10 N -0.716 5.716 11 C 0.558 3.442 12 O -0.521 6.521 13 C -0.174 4.174 14 C 0.166 3.834 15 F -0.111 7.111 16 C -0.156 4.156 17 C -0.061 4.061 18 C -0.140 4.140 19 C -0.066 4.066 20 O -0.538 6.538 21 Si 0.688 3.312 22 C -0.032 4.032 23 C -0.131 4.131 24 C -0.115 4.115 25 H 0.054 0.946 26 H 0.053 0.947 27 H 0.057 0.943 28 H 0.067 0.933 29 H 0.054 0.946 30 H 0.057 0.943 31 H 0.053 0.947 32 H 0.057 0.943 33 H 0.072 0.928 34 H 0.070 0.930 35 H 0.081 0.919 36 H 0.398 0.602 37 H 0.150 0.850 38 H 0.141 0.859 39 H 0.118 0.882 40 H 0.381 0.619 41 H -0.252 1.252 42 H -0.255 1.255 43 H 0.137 0.863 44 H 0.073 0.927 45 H 0.068 0.932 46 H 0.066 0.934 47 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.551 -1.998 -3.352 4.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.110 4.110 3 C -0.208 4.208 4 C -0.101 4.101 5 H 0.091 0.909 6 C -0.155 4.155 7 C -0.166 4.166 8 C 0.043 3.957 9 H 0.108 0.892 10 N -0.370 5.370 11 C 0.344 3.656 12 O -0.397 6.397 13 C -0.178 4.178 14 C 0.146 3.854 15 F -0.089 7.089 16 C -0.175 4.175 17 C -0.079 4.079 18 C -0.141 4.141 19 C -0.177 4.177 20 O -0.344 6.344 21 Si 0.590 3.410 22 C -0.051 4.051 23 C -0.170 4.170 24 C -0.152 4.152 25 H 0.073 0.927 26 H 0.072 0.928 27 H 0.076 0.924 28 H 0.086 0.914 29 H 0.073 0.927 30 H 0.076 0.924 31 H 0.072 0.928 32 H 0.076 0.924 33 H 0.091 0.909 34 H 0.089 0.911 35 H 0.100 0.900 36 H 0.235 0.765 37 H 0.167 0.833 38 H 0.159 0.841 39 H 0.135 0.865 40 H 0.229 0.771 41 H -0.176 1.176 42 H -0.180 1.180 43 H 0.155 0.845 44 H 0.092 0.908 45 H 0.087 0.913 46 H 0.085 0.915 47 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -1.950 -1.342 -3.567 4.281 hybrid contribution -0.199 0.591 0.062 0.627 sum -2.150 -0.751 -3.506 4.180 Atomic orbital electron populations 1.21910 0.95195 1.01857 1.01829 1.21137 0.95753 0.96220 0.97905 1.21905 1.01189 0.95917 1.01797 1.21243 0.95204 0.95366 0.98311 0.90890 1.21666 1.01101 0.95335 0.97431 1.21849 0.93705 1.01475 0.99569 1.20992 0.93821 0.92724 0.88176 0.89181 1.46007 1.17298 1.56416 1.17264 1.17970 0.81857 0.78670 0.87054 1.90866 1.55819 1.59117 1.33937 1.20115 0.95503 1.05704 0.96453 1.17755 0.88031 0.95883 0.83773 1.91631 1.72926 1.93588 1.50722 1.21173 1.02267 1.02182 0.91895 1.21091 0.92881 0.96326 0.97629 1.20327 0.95837 1.00969 0.96970 1.25045 0.90032 1.02436 1.00216 1.86515 1.28221 1.31418 1.88234 0.94737 0.78759 0.89208 0.78341 1.21005 0.98521 0.95057 0.90481 1.21920 1.01411 0.94853 0.98812 1.21607 0.94969 1.00613 0.98020 0.92663 0.92788 0.92378 0.91443 0.92659 0.92421 0.92799 0.92395 0.90936 0.91086 0.90024 0.76484 0.83263 0.84138 0.86486 0.77141 1.17620 1.17999 0.84488 0.90797 0.91314 0.91497 0.92192 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 8.84 37.16 0.33 0.52 16 2 C -0.09 0.12 2.51 -90.62 -0.23 -0.11 16 3 C -0.15 0.13 8.84 37.16 0.33 0.46 16 4 C -0.08 0.13 1.78 -90.62 -0.16 -0.03 16 5 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 6 C -0.12 0.26 4.68 -26.73 -0.13 0.13 16 7 C -0.13 0.23 5.61 -26.73 -0.15 0.08 16 8 C 0.15 0.02 2.78 -67.93 -0.19 -0.17 16 9 H 0.09 0.17 7.58 -51.93 -0.39 -0.22 16 10 N -0.72 -0.11 4.18 -54.80 -0.23 -0.34 16 11 C 0.56 1.77 7.73 -12.40 -0.10 1.67 16 12 O -0.52 -3.74 15.00 5.30 0.08 -3.66 16 13 C -0.17 -0.26 5.88 -104.91 -0.62 -0.88 16 14 C 0.17 0.36 7.29 -38.96 -0.28 0.07 16 15 F -0.11 -0.55 15.55 2.25 0.04 -0.52 16 16 C -0.16 0.12 10.01 -39.56 -0.40 -0.27 16 17 C -0.06 0.14 8.66 -39.51 -0.34 -0.20 16 18 C -0.14 0.27 5.39 -104.68 -0.56 -0.30 16 19 C -0.07 0.17 2.82 36.00 0.10 0.27 16 20 O -0.54 1.15 12.76 -35.23 -0.45 0.70 16 21 Si 0.69 -2.01 29.77 -169.99 -5.06 -7.08 16 22 C -0.03 0.03 9.09 -39.19 -0.36 -0.32 16 23 C -0.13 -0.04 5.60 -26.76 -0.15 -0.19 16 24 C -0.11 0.08 4.69 -26.76 -0.13 -0.05 16 25 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 -0.09 6.43 -51.93 -0.33 -0.43 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.06 -0.04 6.43 -51.93 -0.33 -0.37 16 31 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.06 -0.14 6.50 -51.93 -0.34 -0.48 16 33 H 0.07 -0.16 6.43 -51.93 -0.33 -0.50 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.40 -0.75 4.90 -40.82 -0.20 -0.95 16 37 H 0.15 -0.40 8.06 -52.48 -0.42 -0.83 16 38 H 0.14 -0.64 4.86 -52.49 -0.25 -0.89 16 39 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 40 H 0.38 -2.18 8.70 45.56 0.40 -1.79 16 41 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 42 H -0.26 0.17 7.11 56.52 0.40 0.57 16 43 H 0.14 -0.36 6.41 -52.48 -0.34 -0.70 16 44 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 45 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 46 H 0.07 -0.02 6.43 -51.93 -0.33 -0.36 16 47 H 0.06 -0.02 7.60 -51.93 -0.39 -0.41 16 LS Contribution 363.37 15.07 5.48 5.48 Total: 0.00 -6.93 363.37 -10.29 -17.22 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -7.12 Total: -12.49 kcal Atomic # 6 Polarization: 3.70 SS G_CDS: -3.02 Total: 0.68 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.23 Total: -0.34 kcal Atomic # 8 Polarization: -2.59 SS G_CDS: -0.37 Total: -2.96 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -2.01 SS G_CDS: -5.06 Total: -7.08 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -6.93 -10.29 -17.22 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623128_12335834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.905 kcal (2) G-P(sol) polarization free energy of solvation -6.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.838 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds