Wall clock time and date at job start Sun Mar 7 2021 09:35:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47577 * 2 1 4 4 C 1.53001 * 109.47157 * 120.00140 * 2 1 3 5 5 H 1.09007 * 109.46793 * 300.00023 * 4 2 1 6 6 C 1.53006 * 109.47079 * 59.99401 * 4 2 1 7 7 C 1.53001 * 109.47079 * 180.02562 * 6 4 2 8 8 C 1.52997 * 109.47157 * 300.00599 * 7 6 4 9 9 H 1.09010 * 109.46980 * 180.02562 * 8 7 6 10 10 N 1.46505 * 109.47072 * 299.99709 * 8 7 6 11 11 C 1.34777 * 119.99880 * 205.00475 * 10 8 7 12 12 O 1.21550 * 119.99886 * 359.97438 * 11 10 8 13 13 C 1.47846 * 119.99615 * 180.02562 * 11 10 8 14 14 C 1.39538 * 120.14407 * 359.97438 * 13 11 10 15 15 C 1.38071 * 119.84358 * 179.97438 * 14 13 11 16 16 Br 1.89099 * 119.93572 * 179.97438 * 15 14 13 17 17 C 1.38415 * 120.12663 * 0.02562 * 15 14 13 18 18 C 1.38365 * 120.28253 * 0.02562 * 17 15 14 19 19 C 1.50701 * 119.92333 * 179.70228 * 18 17 15 20 20 O 1.42900 * 109.47008 * 120.00153 * 19 18 17 21 21 Si 1.86298 * 109.47267 * 359.97438 * 19 18 17 22 22 C 1.37949 * 120.15661 * 359.97438 * 18 17 15 23 23 C 1.52997 * 109.47577 * 59.99860 * 8 7 6 24 24 C 1.52993 * 109.47424 * 179.97438 * 4 2 1 25 25 H 1.08999 * 109.46820 * 300.00518 * 1 2 3 26 26 H 1.09001 * 109.46822 * 59.99435 * 1 2 3 27 27 H 1.09000 * 109.47239 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47047 * 239.99985 * 2 1 3 29 29 H 1.09007 * 109.46926 * 59.99638 * 3 2 1 30 30 H 1.08998 * 109.47762 * 179.97438 * 3 2 1 31 31 H 1.08996 * 109.47082 * 300.00288 * 3 2 1 32 32 H 1.08999 * 109.46818 * 60.00342 * 6 4 2 33 33 H 1.09001 * 109.47077 * 300.00580 * 6 4 2 34 34 H 1.08998 * 109.47227 * 179.97438 * 7 6 4 35 35 H 1.09007 * 109.46793 * 60.00622 * 7 6 4 36 36 H 0.96998 * 119.99948 * 24.99888 * 10 8 7 37 37 H 1.08003 * 120.07604 * 0.02562 * 14 13 11 38 38 H 1.07999 * 119.85911 * 180.02562 * 17 15 14 39 39 H 1.09000 * 109.47331 * 239.99677 * 19 18 17 40 40 H 0.96706 * 113.99961 * 180.02562 * 20 19 18 41 41 H 1.48504 * 110.00048 * 59.99719 * 21 19 18 42 42 H 1.48497 * 110.00404 * 181.31879 * 21 19 18 43 43 H 1.07994 * 120.06517 * 179.97438 * 22 18 17 44 44 H 1.09007 * 109.46926 * 59.99638 * 23 8 7 45 45 H 1.08994 * 109.47314 * 179.97438 * 23 8 7 46 46 H 1.08999 * 109.47099 * 300.00040 * 24 4 2 47 47 H 1.09003 * 109.47191 * 60.00252 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.6766 -0.2074 2.1392 6 6 1.5298 -2.1638 1.2493 7 6 2.0393 -2.8849 2.4988 8 6 3.5693 -2.8849 2.4995 9 1 3.9323 -3.3991 3.3895 10 7 4.0581 -3.5757 1.3036 11 6 5.2801 -4.1444 1.3060 12 8 5.9767 -4.0836 2.3003 13 6 5.7736 -4.8410 0.0990 14 6 4.9765 -4.9121 -1.0442 15 6 5.4438 -5.5638 -2.1682 16 35 4.3656 -5.6622 -3.7185 17 6 6.6995 -6.1460 -2.1619 18 6 7.4938 -6.0797 -1.0309 19 6 8.8569 -6.7223 -1.0308 20 8 9.8524 -5.7274 -0.7834 21 14 9.1694 -7.5161 -2.6870 22 6 7.0386 -5.4315 0.0985 23 6 4.0794 -1.4425 2.4995 24 6 3.5699 -0.7219 1.2490 25 1 -0.3633 0.5139 0.8899 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.6767 1.9563 0.8900 30 1 3.1301 1.4425 0.0005 31 1 1.6768 1.9563 -0.8899 32 1 1.8932 -2.6776 0.3593 33 1 0.4398 -2.1637 1.2492 34 1 1.6756 -3.9124 2.4991 35 1 1.6756 -2.3709 3.3886 36 1 3.5023 -3.6239 0.5101 37 1 3.9968 -4.4576 -1.0500 38 1 7.0608 -6.6544 -3.0437 39 1 8.9005 -7.4818 -0.2503 40 1 10.7565 -6.0706 -0.7697 41 1 9.1125 -6.4913 -3.7603 42 1 10.4973 -8.1807 -2.6893 43 1 7.6596 -5.3809 0.9806 44 1 3.7156 -0.9284 3.3892 45 1 5.1693 -1.4425 2.5004 46 1 3.9329 -1.2359 0.3590 47 1 3.9337 0.3057 1.2488 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16623128_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:35:42 Heat of formation + Delta-G solvation = -51.328627 kcal Electronic energy + Delta-G solvation = -27647.642865 eV Core-core repulsion = 23842.331417 eV Total energy + Delta-G solvation = -3805.311448 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.093 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.81339 -40.60472 -39.42733 -37.82371 -36.68926 -34.25594 -33.67475 -32.78716 -31.92954 -30.48636 -29.80039 -28.00499 -27.03725 -25.57044 -23.81390 -23.36940 -22.70089 -21.77360 -20.85527 -20.20166 -19.04612 -18.65094 -17.69290 -17.40648 -16.77954 -16.51189 -16.28311 -16.07378 -15.49598 -15.31442 -15.06622 -15.01968 -14.85657 -14.66230 -14.41843 -14.20714 -14.12347 -14.01414 -13.65517 -13.38029 -13.11014 -13.07344 -12.84219 -12.60727 -12.43882 -12.24845 -12.05413 -12.03302 -12.01294 -11.87918 -11.70166 -11.49431 -11.31223 -11.16114 -10.98219 -10.83098 -10.65043 -10.32909 -10.06073 -9.90350 -4.99088 -0.52476 -0.17116 0.40754 1.18934 1.52301 1.55353 1.89029 2.00172 2.44707 3.12930 3.37038 3.55654 3.65891 3.68785 3.75513 3.79445 3.86901 3.96870 4.04410 4.11227 4.15594 4.23967 4.29409 4.33299 4.39785 4.48715 4.54623 4.58308 4.64838 4.68013 4.74320 4.79307 4.83510 4.91560 4.98753 5.03231 5.03707 5.08999 5.10506 5.15840 5.18699 5.22511 5.30717 5.33555 5.36934 5.38454 5.50252 5.57314 5.63355 6.37514 6.52044 7.04753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.089 4.089 3 C -0.152 4.152 4 C -0.077 4.077 5 H 0.071 0.929 6 C -0.116 4.116 7 C -0.121 4.121 8 C 0.146 3.854 9 H 0.071 0.929 10 N -0.701 5.701 11 C 0.560 3.440 12 O -0.573 6.573 13 C -0.136 4.136 14 C -0.046 4.046 15 C -0.098 4.098 16 Br -0.025 7.025 17 C -0.063 4.063 18 C -0.078 4.078 19 C -0.088 4.088 20 O -0.557 6.557 21 Si 0.758 3.242 22 C -0.031 4.031 23 C -0.128 4.128 24 C -0.110 4.110 25 H 0.052 0.948 26 H 0.050 0.950 27 H 0.065 0.935 28 H 0.069 0.931 29 H 0.052 0.948 30 H 0.053 0.947 31 H 0.051 0.949 32 H 0.066 0.934 33 H 0.081 0.919 34 H 0.078 0.922 35 H 0.087 0.913 36 H 0.410 0.590 37 H 0.160 0.840 38 H 0.155 0.845 39 H 0.103 0.897 40 H 0.399 0.601 41 H -0.290 1.290 42 H -0.278 1.278 43 H 0.131 0.869 44 H 0.080 0.920 45 H 0.042 0.958 46 H 0.057 0.943 47 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.331 -2.625 -2.239 5.537 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.108 4.108 3 C -0.209 4.209 4 C -0.095 4.095 5 H 0.089 0.911 6 C -0.153 4.153 7 C -0.159 4.159 8 C 0.042 3.958 9 H 0.090 0.910 10 N -0.354 5.354 11 C 0.347 3.653 12 O -0.453 6.453 13 C -0.140 4.140 14 C -0.066 4.066 15 C -0.177 4.177 16 Br 0.061 6.939 17 C -0.083 4.083 18 C -0.079 4.079 19 C -0.196 4.196 20 O -0.368 6.368 21 Si 0.662 3.338 22 C -0.050 4.050 23 C -0.167 4.167 24 C -0.147 4.147 25 H 0.071 0.929 26 H 0.069 0.931 27 H 0.084 0.916 28 H 0.087 0.913 29 H 0.071 0.929 30 H 0.073 0.927 31 H 0.070 0.930 32 H 0.084 0.916 33 H 0.100 0.900 34 H 0.096 0.904 35 H 0.106 0.894 36 H 0.249 0.751 37 H 0.178 0.822 38 H 0.172 0.828 39 H 0.120 0.880 40 H 0.250 0.750 41 H -0.218 1.218 42 H -0.205 1.205 43 H 0.149 0.851 44 H 0.098 0.902 45 H 0.061 0.939 46 H 0.076 0.924 47 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -4.305 -2.248 -2.778 5.595 hybrid contribution 1.436 0.702 0.702 1.745 sum -2.869 -1.546 -2.076 3.865 Atomic orbital electron populations 1.21899 0.94923 1.02268 1.01572 1.21113 0.95898 0.95796 0.97976 1.21913 1.01001 0.96403 1.01603 1.21180 0.94197 0.95991 0.98170 0.91081 1.21674 1.01615 0.94623 0.97423 1.21811 0.91743 1.02124 1.00187 1.21016 0.95269 0.92128 0.87382 0.91044 1.45960 1.16598 1.55108 1.17763 1.18310 0.81890 0.78154 0.86917 1.90785 1.57405 1.61431 1.35681 1.19915 0.96350 1.03362 0.94412 1.21423 0.99900 0.95370 0.89948 1.21691 0.96429 1.05053 0.94554 1.96844 1.66572 1.97808 1.32719 1.21316 0.92474 0.96572 0.97897 1.19371 0.95437 0.99919 0.93188 1.25046 0.86449 0.94385 1.13720 1.86545 1.19734 1.36535 1.93953 0.94281 0.84812 0.81825 0.72903 1.21251 0.93603 0.91862 0.98306 1.21887 0.99753 0.95338 0.99689 1.21577 0.95799 1.00134 0.97239 0.92899 0.93108 0.91598 0.91283 0.92877 0.92749 0.92968 0.91562 0.90038 0.90370 0.89444 0.75105 0.82230 0.82758 0.87958 0.75042 1.21754 1.20495 0.85106 0.90186 0.93931 0.92394 0.91972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.59 8.84 71.98 0.64 1.23 16 2 C -0.09 0.32 2.51 -10.80 -0.03 0.29 16 3 C -0.15 0.28 8.84 71.98 0.64 0.92 16 4 C -0.08 0.32 1.77 -10.79 -0.02 0.30 16 5 H 0.07 -0.23 8.14 -2.38 -0.02 -0.25 16 6 C -0.12 0.75 4.68 30.60 0.14 0.89 16 7 C -0.12 0.62 5.61 30.59 0.17 0.79 16 8 C 0.15 -0.01 2.78 44.99 0.13 0.11 16 9 H 0.07 0.30 7.58 -2.38 -0.02 0.28 16 10 N -0.70 0.13 4.18 -445.40 -1.86 -1.73 16 11 C 0.56 3.55 7.74 86.79 0.67 4.22 16 12 O -0.57 -8.40 16.01 -3.87 -0.06 -8.46 16 13 C -0.14 -0.49 5.87 -20.09 -0.12 -0.61 16 14 C -0.05 0.05 9.28 22.54 0.21 0.26 16 15 C -0.10 0.04 6.22 22.27 0.14 0.18 16 16 Br -0.03 0.04 33.69 -20.37 -0.69 -0.65 16 17 C -0.06 0.00 8.41 22.34 0.19 0.19 16 18 C -0.08 -0.16 5.42 -19.90 -0.11 -0.27 16 19 C -0.09 0.08 2.81 71.24 0.20 0.28 16 20 O -0.56 -1.30 12.75 -148.98 -1.90 -3.20 16 21 Si 0.76 -2.28 29.78 68.60 2.04 -0.24 16 22 C -0.03 -0.16 9.16 22.53 0.21 0.05 16 23 C -0.13 -0.13 5.61 30.61 0.17 0.05 16 24 C -0.11 0.16 4.69 30.61 0.14 0.31 16 25 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 27 H 0.07 -0.36 6.43 -2.39 -0.02 -0.37 16 28 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.05 -0.08 8.14 -2.38 -0.02 -0.10 16 30 H 0.05 -0.06 6.43 -2.39 -0.02 -0.08 16 31 H 0.05 -0.08 8.14 -2.39 -0.02 -0.09 16 32 H 0.07 -0.52 6.51 -2.39 -0.02 -0.53 16 33 H 0.08 -0.59 6.43 -2.39 -0.02 -0.61 16 34 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 35 H 0.09 -0.50 8.14 -2.38 -0.02 -0.52 16 36 H 0.41 -2.17 4.90 -92.71 -0.45 -2.62 16 37 H 0.16 -1.04 6.40 -2.91 -0.02 -1.06 16 38 H 0.16 -0.52 4.86 -2.91 -0.01 -0.53 16 39 H 0.10 -0.50 7.96 -2.39 -0.02 -0.52 16 40 H 0.40 -2.35 8.74 -74.05 -0.65 -3.00 16 41 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 42 H -0.28 -0.25 7.11 99.48 0.71 0.46 16 43 H 0.13 1.04 7.65 -2.91 -0.02 1.02 16 44 H 0.08 -0.03 8.14 -2.38 -0.02 -0.05 16 45 H 0.04 0.28 8.14 -2.39 -0.02 0.26 16 46 H 0.06 -0.05 7.60 -2.39 -0.02 -0.06 16 47 H 0.06 -0.01 6.43 -2.39 -0.02 -0.03 16 Total: 0.00 -15.81 380.19 0.83 -14.98 By element: Atomic # 1 Polarization: -9.82 SS G_CDS: -0.07 Total: -9.89 kcal Atomic # 6 Polarization: 5.82 SS G_CDS: 3.37 Total: 9.19 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -1.86 Total: -1.73 kcal Atomic # 8 Polarization: -9.70 SS G_CDS: -1.96 Total: -11.66 kcal Atomic # 14 Polarization: -2.28 SS G_CDS: 2.04 Total: -0.24 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.65 kcal Total: -15.81 0.83 -14.98 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623128_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.351 kcal (2) G-P(sol) polarization free energy of solvation -15.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.833 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.329 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds